RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	YKL063C	P35725	167 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	DOA1	P36037	715 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	VPS51	P36116	164 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	YKR078W	P36158	585 aa	Known RBP	4.18	□□□□□ -1.74
RCL1	YOL010W	MNN2	P38069	597 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	POP7	P38291	140 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	CIN4	P39110	191 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	AST2	P39945	430 aa	Known RBP	4.18	□□□□□ -1.74
RCL1	YOL010W	REE1	P40893	198 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	FMP32	P43557	207 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	MDE1	P47095	244 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	IDP3	P53982	420 aa	Known RBP	4.18	□□□□□ -1.74
RCL1	YOL010W	ERV25	P54837	211 aa	Known RBP	4.18	□□□□□ -1.74
RCL1	YOL010W	RNY1	Q02933	434 aa	Known RBP	4.18	□□□□□ -1.74
RCL1	YOL010W	YML108W	Q03759	105 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	TVP15	Q03860	143 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	SPC2	Q04969	178 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	FAR8	Q05040	523 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	DCR2	Q05924	578 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	GMC2	Q06201	188 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	TDA5	Q06417	326 aa	Known RBP	4.18	□□□□□ -1.74
RCL1	YOL010W	GPN2	Q08726	347 aa	Predicted RBP	4.18	□□□□□ -1.74
RCL1	YOL010W	UAF30	Q08747	228 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	YOR365C	Q08844	703 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	YTM1	Q12024	460 aa	Predicted RBP	4.18	□□□□□ -1.74
RCL1	YOL010W	SCM3	Q12334	223 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	NCA2	Q12374	616 aa		4.18	□□□□□ -1.74
RCL1	YOL010W	YER145C-A	A0A023PYF4	145 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	RPS17A	P02407	136 aa	Known RBP	4.17	□□□□□ -1.74
RCL1	YOL010W	DST1	P07273	309 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	ARF1	P11076	181 aa	Known RBP	4.17	□□□□□ -1.74
RCL1	YOL010W	RPS17B	P14127	136 aa	Known RBP	4.17	□□□□□ -1.74
RCL1	YOL010W	DBR1	P24309	405 aa	Known RBP	4.17	□□□□□ -1.74
RCL1	YOL010W	NPP1	P25353	742 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	ARE1	P25628	610 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	IDH2	P28241	369 aa	Known RBP	4.17	□□□□□ -1.74
RCL1	YOL010W	MSN2	P33748	704 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	SPO23	P33757	523 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	HCS1	P34243	683 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	FES1	P38260	290 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	TRR2	P38816	342 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	ATG7	P38862	630 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	PZF1	P39933	429 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	PFK26	P40433	827 aa	Known RBP	4.17	□□□□□ -1.74
RCL1	YOL010W	AGE2	P40529	298 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	ARF3	P40994	183 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
RCL1	YOL010W	MEP2	P41948	499 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	CCT7	P42943	550 aa	Known RBP	4.17	□□□□□ -1.74
RCL1	YOL010W	GCN20	P43535	752 aa	Known RBP	4.17	□□□□□ -1.74
RCL1	YOL010W	MAD3	P47074	515 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	SSN8	P47821	323 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	NAS6	P50086	228 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	MNT4	P53745	580 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	YNL010W	P53981	241 aa	Known RBP	4.17	□□□□□ -1.74
RCL1	YOL010W	DPB4	Q04603	196 aa	Known RBP	4.17	□□□□□ -1.74
RCL1	YOL010W	YDR124W	Q04608	324 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	YPR091C	Q06833	770 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	RAF1	Q06891	181 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	VIK1	Q12045	647 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	PSY3	Q12318	242 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	MED4	Q12343	284 aa		4.17	□□□□□ -1.74
RCL1	YOL010W	AIM17	P23180	465 aa	Known RBP	4.16	□□□□□ -1.74
RCL1	YOL010W	RVS161	P25343	265 aa	Known RBP	4.16	□□□□□ -1.74
RCL1	YOL010W	RPC19	P28000	142 aa	Known RBP	4.16	□□□□□ -1.74
RCL1	YOL010W	AAR2	P32357	355 aa	Predicted RBP	4.16	□□□□□ -1.74
RCL1	YOL010W	SPC29	P33419	253 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	CPR5	P35176	225 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	FRE2	P36033	711 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	ATP3	P38077	311 aa	Known RBP	4.16	□□□□□ -1.74
RCL1	YOL010W	YBR138C	P38277	524 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	YHL044W	P38727	235 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	CTF8	P38877	133 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	ALG5	P40350	334 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	MTR3	P48240	250 aa	Predicted RBP	4.16	□□□□□ -1.74
RCL1	YOL010W	MSY1	P48527	492 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	TAF6	P53040	516 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	YGR054W	P53235	642 aa	Known RBP	4.16	□□□□□ -1.74
RCL1	YOL010W	MSC1	Q03104	513 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	HOT1	Q03213	719 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	VPS74	Q06385	345 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	PIN3	Q06449	215 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	FDH1	Q08911	376 aa		4.16	□□□□□ -1.74
RCL1	YOL010W	YOR289W	Q12012	251 aa	Predicted RBP	4.16	□□□□□ -1.74
RCL1	YOL010W	ARG81	P05085	880 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	CAR2	P07991	424 aa	Known RBP	4.15	□□□□□ -1.75
RCL1	YOL010W	CTA1	P15202	515 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	HMX1	P32339	317 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	VPH2	P32341	215 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	CAT2	P32796	670 aa	Known RBP	4.15	□□□□□ -1.75
RCL1	YOL010W	YUH1	P35127	236 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	CAF4	P36130	643 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	PSA1	P41940	361 aa	Known RBP	4.15	□□□□□ -1.75
RCL1	YOL010W	BNA6	P43619	295 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	YJR154W	P47181	346 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	RPS12	P48589	143 aa	Known RBP	4.15	□□□□□ -1.75
RCL1	YOL010W	MRM2	P53123	320 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	ORM1	P53224	222 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	TPC1	P53257	314 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	CUS2	P53830	285 aa	Predicted RBP	4.15	□□□□□ -1.75
RCL1	YOL010W	FYV6	P53913	173 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms