RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A TOS3P43637 560 aa2.99□□□□□ -1.93
YSF3YNL138W-A BTN2P53286 410 aa2.99□□□□□ -1.93
YSF3YNL138W-A EMI1Q04406 187 aa2.99□□□□□ -1.93
YSF3YNL138W-A HRI1Q05905 244 aaKnown RBP2.99□□□□□ -1.93
YSF3YNL138W-A YLR345WQ06137 509 aa2.99□□□□□ -1.93
YSF3YNL138W-A RRG7Q08774 242 aaPredicted RBP2.99□□□□□ -1.93
YSF3YNL138W-A YOR338WQ99326 363 aa2.99□□□□□ -1.93
YSF3YNL138W-A BLM10P43583 2143 aa2.98□□□□□ -1.93
YSF3YNL138W-A CYC3P06182 269 aa2.98□□□□□ -1.93
YSF3YNL138W-A SCH9P11792 824 aaKnown RBP2.98□□□□□ -1.93
YSF3YNL138W-A RAD57P25301 460 aa2.98□□□□□ -1.93
YSF3YNL138W-A SRB2P34162 210 aa2.98□□□□□ -1.93
YSF3YNL138W-A CSG2P35206 410 aa2.98□□□□□ -1.93
YSF3YNL138W-A EBP2P36049 427 aaKnown RBP2.98□□□□□ -1.93
YSF3YNL138W-A SLM4P38247 162 aa2.98□□□□□ -1.93
YSF3YNL138W-A YER189WP40104 122 aa2.98□□□□□ -1.93
YSF3YNL138W-A CAK1P43568 368 aaPredicted RBP2.98□□□□□ -1.93
YSF3YNL138W-A PMT4P46971 762 aa2.98□□□□□ -1.93
YSF3YNL138W-A JHD2P47156 728 aaPredicted RBP2.98□□□□□ -1.93
YSF3YNL138W-A TCB2P48231 1178 aa2.98□□□□□ -1.93
YSF3YNL138W-A TRF5P48561 642 aaKnown RBP2.98□□□□□ -1.93
YSF3YNL138W-A YNL143CP53908 130 aa2.98□□□□□ -1.93
YSF3YNL138W-A OAZ1Q02803 292 aa2.98□□□□□ -1.93
YSF3YNL138W-A TAF12Q03761 539 aa2.98□□□□□ -1.93
YSF3YNL138W-A SXM1Q04175 944 aaKnown RBP2.98□□□□□ -1.93
YSF3YNL138W-A KAP95Q06142 861 aaKnown RBP2.98□□□□□ -1.93
YSF3YNL138W-A AKR2Q12013 749 aa2.98□□□□□ -1.93
YSF3YNL138W-A COX5AP00424 153 aa2.97□□□□□ -1.93
YSF3YNL138W-A NFT1P0CE68 1218 aa2.97□□□□□ -1.93
YSF3YNL138W-A PET123P17558 318 aa2.97□□□□□ -1.93
YSF3YNL138W-A UBA1P22515 1024 aaKnown RBP2.97□□□□□ -1.93
YSF3YNL138W-A AAT2P23542 418 aaKnown RBP2.97□□□□□ -1.93
YSF3YNL138W-A RBK1P25332 333 aa2.97□□□□□ -1.93
YSF3YNL138W-A MNS1P32906 549 aa2.97□□□□□ -1.93
YSF3YNL138W-A YHR182WP38870 785 aa2.97□□□□□ -1.93
YSF3YNL138W-A PRM9P39551 298 aa2.97□□□□□ -1.93
YSF3YNL138W-A PRE5P40302 234 aaKnown RBP2.97□□□□□ -1.93
YSF3YNL138W-A SNT309Q06091 175 aaPredicted RBP2.97□□□□□ -1.93
YSF3YNL138W-A CMS1Q07897 291 aaKnown RBP2.97□□□□□ -1.93
YSF3YNL138W-A TMC1Q08422 150 aaPredicted RBP2.97□□□□□ -1.93
YSF3YNL138W-A IMA3P0CW40 589 aa2.96□□□□□ -1.94
YSF3YNL138W-A IMA4P0CW41 589 aa2.96□□□□□ -1.94
YSF3YNL138W-A ARO3P14843 370 aaKnown RBP2.96□□□□□ -1.94
YSF3YNL138W-A NOP1P15646 327 aaKnown RBP2.96□□□□□ -1.94
YSF3YNL138W-A EPT1P22140 391 aa2.96□□□□□ -1.94
YSF3YNL138W-A MRPL4P36517 319 aa2.96□□□□□ -1.94
YSF3YNL138W-A CYC2P38909 366 aa2.96□□□□□ -1.94
YSF3YNL138W-A PEX31P53203 462 aa2.96□□□□□ -1.94
YSF3YNL138W-A CWC25P53854 179 aaKnown RBP2.96□□□□□ -1.94
YSF3YNL138W-A RCF1Q03713 159 aa2.96□□□□□ -1.94
YSF3YNL138W-A PAL1Q05518 499 aaKnown RBP2.96□□□□□ -1.94
YSF3YNL138W-A IMA2Q08295 589 aa2.96□□□□□ -1.94
YSF3YNL138W-A SRL2Q12020 392 aa2.96□□□□□ -1.94
YSF3YNL138W-A YDL211CQ12121 372 aa2.96□□□□□ -1.94
YSF3YNL138W-A YRM1Q12340 786 aa2.96□□□□□ -1.94
YSF3YNL138W-A CPR2P23285 205 aa2.95□□□□□ -1.94
YSF3YNL138W-A YSR3P23501 404 aa2.95□□□□□ -1.94
YSF3YNL138W-A CAB3P36076 571 aa2.95□□□□□ -1.94
YSF3YNL138W-A YFR018CP43599 363 aa2.95□□□□□ -1.94
YSF3YNL138W-A YML6P51998 286 aa2.95□□□□□ -1.94
YSF3YNL138W-A RHO5P53879 331 aaKnown RBP2.95□□□□□ -1.94
YSF3YNL138W-A MRS2Q01926 470 aa2.95□□□□□ -1.94
YSF3YNL138W-A HOT1Q03213 719 aa2.95□□□□□ -1.94
YSF3YNL138W-A ADD37Q03233 198 aa2.95□□□□□ -1.94
YSF3YNL138W-A YDR209CQ03480 137 aa2.95□□□□□ -1.94
YSF3YNL138W-A BCH1Q05029 724 aa2.95□□□□□ -1.94
YSF3YNL138W-A SMF3Q12078 473 aaPredicted RBP2.95□□□□□ -1.94
YSF3YNL138W-A TPO4Q12256 659 aa2.95□□□□□ -1.94
YSF3YNL138W-A RBD2Q12270 262 aa2.95□□□□□ -1.94
YSF3YNL138W-A OCA6Q12454 224 aa2.95□□□□□ -1.94
YSF3YNL138W-A YEL073CP39974 107 aa2.94□□□□□ -1.94
YSF3YNL138W-A JLP2P40206 208 aa2.94□□□□□ -1.94
YSF3YNL138W-A TIM13P53299 105 aa2.94□□□□□ -1.94
YSF3YNL138W-A ZRG17P53735 605 aa2.94□□□□□ -1.94
YSF3YNL138W-A GRX8Q05926 109 aa2.94□□□□□ -1.94
YSF3YNL138W-A SWC7Q06707 132 aa2.94□□□□□ -1.94
YSF3YNL138W-A YOL075CQ08234 1294 aa2.94□□□□□ -1.94
YSF3YNL138W-A ATG34Q12292 412 aa2.94□□□□□ -1.94
YSF3YNL138W-A MTR10Q99189 972 aa2.94□□□□□ -1.94
YSF3YNL138W-A SPS100P13130 326 aa2.93□□□□□ -1.94
YSF3YNL138W-A RVS161P25343 265 aaKnown RBP2.93□□□□□ -1.94
YSF3YNL138W-A POP5P28005 173 aa2.93□□□□□ -1.94
YSF3YNL138W-A SPS19P32573 292 aaKnown RBP2.93□□□□□ -1.94
YSF3YNL138W-A MMS21P38632 267 aa2.93□□□□□ -1.94
YSF3YNL138W-A TDA11P38854 504 aa2.93□□□□□ -1.94
YSF3YNL138W-A YEL028WP39989 153 aa2.93□□□□□ -1.94
YSF3YNL138W-A VHS2P40463 436 aa2.93□□□□□ -1.94
YSF3YNL138W-A SFH5P47008 294 aa2.93□□□□□ -1.94
YSF3YNL138W-A TIS11P47977 285 aa2.93□□□□□ -1.94
YSF3YNL138W-A TOM22P49334 152 aa2.93□□□□□ -1.94
YSF3YNL138W-A SDT1P53078 280 aa2.93□□□□□ -1.94
YSF3YNL138W-A URH1Q04179 340 aa2.93□□□□□ -1.94
YSF3YNL138W-A MHR1Q06630 226 aa2.93□□□□□ -1.94
YSF3YNL138W-A MED2Q12124 431 aa2.93□□□□□ -1.94
YSF3YNL138W-A BPH1P25356 2167 aa2.93□□□□□ -1.94
YSF3YNL138W-A PUT4P15380 627 aa2.92□□□□□ -1.94
YSF3YNL138W-A MDH1P17505 334 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
YSF3YNL138W-A PHO84P25297 587 aaKnown RBP2.92□□□□□ -1.94
YSF3YNL138W-A BMH1P29311 267 aaKnown RBP2.92□□□□□ -1.94
YSF3YNL138W-A MRPL10P36520 322 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms