RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C TAF14P35189 244 aa2.82□□□□□ -1.96
SSN8YNL025C ROT2P38138 954 aa2.82□□□□□ -1.96
SSN8YNL025C CHK1P38147 527 aa2.82□□□□□ -1.96
SSN8YNL025C RFT1P38206 574 aaPredicted RBP2.82□□□□□ -1.96
SSN8YNL025C YHR035WP38769 630 aa2.82□□□□□ -1.96
SSN8YNL025C YAL037WP39728 267 aa2.82□□□□□ -1.96
SSN8YNL025C ISC1P40015 477 aaKnown RBP2.82□□□□□ -1.96
SSN8YNL025C TRS85P46944 698 aa2.82□□□□□ -1.96
SSN8YNL025C HOC1P47124 396 aa2.82□□□□□ -1.96
SSN8YNL025C SBH2P52871 88 aa2.82□□□□□ -1.96
SSN8YNL025C USE1P53146 245 aa2.82□□□□□ -1.96
SSN8YNL025C CPD1P53314 239 aa2.82□□□□□ -1.96
SSN8YNL025C YNL140CP53910 189 aa2.82□□□□□ -1.96
SSN8YNL025C YNL092WP53934 400 aa2.82□□□□□ -1.96
SSN8YNL025C MTQ1P53944 314 aa2.82□□□□□ -1.96
SSN8YNL025C IRC4Q03036 179 aa2.82□□□□□ -1.96
SSN8YNL025C OST6Q03723 332 aa2.82□□□□□ -1.96
SSN8YNL025C MSS11Q03825 758 aa2.82□□□□□ -1.96
SSN8YNL025C SPC24Q04477 213 aa2.82□□□□□ -1.96
SSN8YNL025C ASR1Q06834 288 aa2.82□□□□□ -1.96
SSN8YNL025C ESA1Q08649 445 aa2.82□□□□□ -1.96
SSN8YNL025C RPS10AQ08745 105 aaPredicted RBP2.82□□□□□ -1.96
SSN8YNL025C MUM3Q08750 479 aa2.82□□□□□ -1.96
SSN8YNL025C YOR387CQ08910 206 aa2.82□□□□□ -1.96
SSN8YNL025C JLP1Q12358 412 aa2.82□□□□□ -1.96
SSN8YNL025C SNU23Q12368 194 aaPredicted RBP2.82□□□□□ -1.96
SSN8YNL025C RPS28AQ3E7X9 67 aaPredicted RBP2.82□□□□□ -1.96
SSN8YNL025C RPL28P02406 149 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C RPL7AP05737 244 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C TPK3P05986 398 aa2.81□□□□□ -1.96
SSN8YNL025C RFA3P26755 122 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C MUD1P32605 298 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C GDA1P32621 518 aa2.81□□□□□ -1.96
SSN8YNL025C MSN2P33748 704 aa2.81□□□□□ -1.96
SSN8YNL025C YNK1P36010 153 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C HMT1P38074 348 aa2.81□□□□□ -1.96
SSN8YNL025C YBR056WP38081 501 aa2.81□□□□□ -1.96
SSN8YNL025C RIM2P38127 377 aa2.81□□□□□ -1.96
SSN8YNL025C RIB5P38145 238 aa2.81□□□□□ -1.96
SSN8YNL025C APD1P38281 316 aa2.81□□□□□ -1.96
SSN8YNL025C DER1P38307 211 aa2.81□□□□□ -1.96
SSN8YNL025C URA8P38627 578 aaPredicted RBP2.81□□□□□ -1.96
SSN8YNL025C STP2P38704 541 aa2.81□□□□□ -1.96
SSN8YNL025C ATG7P38862 630 aa2.81□□□□□ -1.96
SSN8YNL025C YER121WP40076 114 aa2.81□□□□□ -1.96
SSN8YNL025C SYG1P40528 902 aa2.81□□□□□ -1.96
SSN8YNL025C PHB1P40961 287 aa2.81□□□□□ -1.96
SSN8YNL025C RPS10BP46784 105 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C ASG7P46993 209 aa2.81□□□□□ -1.96
SSN8YNL025C SNX4P47057 423 aa2.81□□□□□ -1.96
SSN8YNL025C YJR154WP47181 346 aa2.81□□□□□ -1.96
SSN8YNL025C PRP24P49960 444 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C MIC26P50087 233 aa2.81□□□□□ -1.96
SSN8YNL025C PYK2P52489 506 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C NSA1P53136 463 aaPredicted RBP2.81□□□□□ -1.96
SSN8YNL025C HER2Q03557 464 aa2.81□□□□□ -1.96
SSN8YNL025C PRM6Q04705 352 aa2.81□□□□□ -1.96
SSN8YNL025C YPR147CQ06522 304 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C MHR1Q06630 226 aa2.81□□□□□ -1.96
SSN8YNL025C YOL159CQ08300 171 aa2.81□□□□□ -1.96
SSN8YNL025C YLR053CQ12026 108 aa2.81□□□□□ -1.96
SSN8YNL025C RPL7BQ12213 244 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C YOR114WQ12219 294 aa2.81□□□□□ -1.96
SSN8YNL025C WTM1Q12363 437 aaKnown RBP2.81□□□□□ -1.96
SSN8YNL025C EMP46Q12396 444 aa2.81□□□□□ -1.96
SSN8YNL025C YDR157WA0A023PZE8 133 aa2.8□□□□□ -1.96
SSN8YNL025C HEM2P05373 342 aa2.8□□□□□ -1.96
SSN8YNL025C RAD52P06778 471 aaKnown RBP2.8□□□□□ -1.96
SSN8YNL025C PUT1P09368 476 aa2.8□□□□□ -1.96
SSN8YNL025C SNF3P10870 884 aa2.8□□□□□ -1.96
SSN8YNL025C NAM2P11325 894 aa2.8□□□□□ -1.96
SSN8YNL025C AMD1P15274 810 aaKnown RBP2.8□□□□□ -1.96
SSN8YNL025C ECM8P38246 354 aa2.8□□□□□ -1.96
SSN8YNL025C RCK2P38623 610 aa2.8□□□□□ -1.96
SSN8YNL025C ARP1P38696 384 aa2.8□□□□□ -1.96
SSN8YNL025C LAG1P38703 411 aa2.8□□□□□ -1.96
SSN8YNL025C JLP2P40206 208 aa2.8□□□□□ -1.96
SSN8YNL025C YKE4P40544 346 aa2.8□□□□□ -1.96
SSN8YNL025C CIN2P46670 268 aa2.8□□□□□ -1.96
SSN8YNL025C IRC18P47056 224 aa2.8□□□□□ -1.96
SSN8YNL025C YJR012CP47087 207 aa2.8□□□□□ -1.96
SSN8YNL025C HMS2P47175 358 aa2.8□□□□□ -1.96
SSN8YNL025C PMT5P52867 743 aa2.8□□□□□ -1.96
SSN8YNL025C VEL1P53058 206 aa2.8□□□□□ -1.96
SSN8YNL025C LST7P53237 242 aa2.8□□□□□ -1.96
SSN8YNL025C GTR2P53290 341 aa2.8□□□□□ -1.96
SSN8YNL025C COS6P53344 381 aa2.8□□□□□ -1.96
SSN8YNL025C SMM1P53720 384 aaKnown RBP2.8□□□□□ -1.96
SSN8YNL025C ATP23P53722 227 aa2.8□□□□□ -1.96
SSN8YNL025C CAF40P53829 373 aa2.8□□□□□ -1.96
SSN8YNL025C IBD2P53892 351 aa2.8□□□□□ -1.96
SSN8YNL025C GPI15P53961 229 aa2.8□□□□□ -1.96
SSN8YNL025C PRP38Q00723 242 aaPredicted RBP2.8□□□□□ -1.96
SSN8YNL025C YDC1Q02896 317 aa2.8□□□□□ -1.96
SSN8YNL025C VPS60Q03390 229 aa2.8□□□□□ -1.96
SSN8YNL025C SLD5Q03406 294 aa2.8□□□□□ -1.96
SSN8YNL025C TRS23Q03784 219 aa2.8□□□□□ -1.96
SSN8YNL025C CTR3Q06686 241 aa2.8□□□□□ -1.96
SSN8YNL025C ASA1Q06822 443 aa2.8□□□□□ -1.96
SSN8YNL025C YPD1Q07688 167 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms