RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W YCL012CQ8J0M4 134 aa4.37□□□□□ -1.71
ROT1YMR200W ILV1P00927 576 aaKnown RBP4.36□□□□□ -1.71
ROT1YMR200W BI2P03873 423 aa4.36□□□□□ -1.71
ROT1YMR200W SPO12P17123 173 aa4.36□□□□□ -1.71
ROT1YMR200W RPS2P25443 254 aaKnown RBP4.36□□□□□ -1.71
ROT1YMR200W ITR2P30606 609 aa4.36□□□□□ -1.71
ROT1YMR200W SNC1P31109 117 aa4.36□□□□□ -1.71
ROT1YMR200W YCR041WP37265 110 aa4.36□□□□□ -1.71
ROT1YMR200W PRS2P38620 318 aaKnown RBP4.36□□□□□ -1.71
ROT1YMR200W TRM5P38793 499 aa4.36□□□□□ -1.71
ROT1YMR200W SNZ3P43545 298 aa4.36□□□□□ -1.71
ROT1YMR200W TMA22P47089 198 aaPredicted RBP4.36□□□□□ -1.71
ROT1YMR200W NBP1P52919 319 aaPredicted RBP4.36□□□□□ -1.71
ROT1YMR200W VEL1P53058 206 aa4.36□□□□□ -1.71
ROT1YMR200W CPD1P53314 239 aa4.36□□□□□ -1.71
ROT1YMR200W SNZ2P53824 298 aa4.36□□□□□ -1.71
ROT1YMR200W CAF40P53829 373 aa4.36□□□□□ -1.71
ROT1YMR200W IRC4Q03036 179 aa4.36□□□□□ -1.71
ROT1YMR200W SPC2Q04969 178 aa4.36□□□□□ -1.71
ROT1YMR200W ALE1Q08548 619 aa4.36□□□□□ -1.71
ROT1YMR200W YDL109CQ12103 647 aa4.36□□□□□ -1.71
ROT1YMR200W PER33Q12144 273 aa4.36□□□□□ -1.71
ROT1YMR200W MEX67Q99257 599 aaKnown RBP4.36□□□□□ -1.71
ROT1YMR200W URE2P23202 354 aaKnown RBP4.35□□□□□ -1.71
ROT1YMR200W RNA15P25299 296 aaPredicted RBP4.35□□□□□ -1.71
ROT1YMR200W DCC1P25559 380 aa4.35□□□□□ -1.71
ROT1YMR200W MKK1P32490 508 aa4.35□□□□□ -1.71
ROT1YMR200W NDC1P32500 655 aa4.35□□□□□ -1.71
ROT1YMR200W MRPL6P32904 214 aa4.35□□□□□ -1.71
ROT1YMR200W ATO2P32907 282 aa4.35□□□□□ -1.71
ROT1YMR200W SPO23P33757 523 aa4.35□□□□□ -1.71
ROT1YMR200W RPH1P39956 796 aa4.35□□□□□ -1.71
ROT1YMR200W IMD3P50095 523 aaKnown RBP4.35□□□□□ -1.71
ROT1YMR200W YPT32P51996 222 aaKnown RBP4.35□□□□□ -1.71
ROT1YMR200W RRN9P53437 365 aa4.35□□□□□ -1.71
ROT1YMR200W FRE4P53746 719 aa4.35□□□□□ -1.71
ROT1YMR200W SPR6Q01684 191 aa4.35□□□□□ -1.71
ROT1YMR200W YPL077CQ02831 240 aa4.35□□□□□ -1.71
ROT1YMR200W BET5Q03630 159 aa4.35□□□□□ -1.71
ROT1YMR200W MSS11Q03825 758 aa4.35□□□□□ -1.71
ROT1YMR200W VBA1Q04301 562 aa4.35□□□□□ -1.71
ROT1YMR200W CSM3Q04659 317 aa4.35□□□□□ -1.71
ROT1YMR200W DIC1Q06143 298 aa4.35□□□□□ -1.71
ROT1YMR200W PLB3Q08108 686 aa4.35□□□□□ -1.71
ROT1YMR200W SRL2Q12020 392 aa4.35□□□□□ -1.71
ROT1YMR200W NCA2Q12374 616 aa4.35□□□□□ -1.71
ROT1YMR200W MON2P48563 1636 aaPredicted RBP4.35□□□□□ -1.71
ROT1YMR200W MAK32P23060 363 aa4.34□□□□□ -1.71
ROT1YMR200W LSB5P25369 354 aa4.34□□□□□ -1.71
ROT1YMR200W RFA3P26755 122 aaKnown RBP4.34□□□□□ -1.71
ROT1YMR200W CSE1P33307 960 aa4.34□□□□□ -1.71
ROT1YMR200W ECM15P35195 104 aa4.34□□□□□ -1.71
ROT1YMR200W MRX3P38172 270 aa4.34□□□□□ -1.71
ROT1YMR200W FES1P38260 290 aa4.34□□□□□ -1.71
ROT1YMR200W POP7P38291 140 aa4.34□□□□□ -1.71
ROT1YMR200W AME1P38313 324 aa4.34□□□□□ -1.71
ROT1YMR200W RCK2P38623 610 aa4.34□□□□□ -1.71
ROT1YMR200W PHO90P39535 881 aa4.34□□□□□ -1.71
ROT1YMR200W HAT2P39984 401 aa4.34□□□□□ -1.71
ROT1YMR200W RPL10P41805 221 aaKnown RBP4.34□□□□□ -1.71
ROT1YMR200W KEG1P43614 200 aa4.34□□□□□ -1.71
ROT1YMR200W YIP3P53633 176 aa4.34□□□□□ -1.71
ROT1YMR200W IDP3P53982 420 aaKnown RBP4.34□□□□□ -1.71
ROT1YMR200W MRS2Q01926 470 aa4.34□□□□□ -1.71
ROT1YMR200W SLD5Q03406 294 aa4.34□□□□□ -1.71
ROT1YMR200W PEX10Q05568 337 aa4.34□□□□□ -1.71
ROT1YMR200W GLO2Q05584 274 aa4.34□□□□□ -1.71
ROT1YMR200W NNT1Q05874 261 aa4.34□□□□□ -1.71
ROT1YMR200W SGT1Q08446 395 aa4.34□□□□□ -1.71
ROT1YMR200W TMS1Q12116 473 aa4.34□□□□□ -1.71
ROT1YMR200W DET1Q99288 334 aaKnown RBP4.34□□□□□ -1.71
ROT1YMR200W EDE1P34216 1381 aa4.34□□□□□ -1.71
ROT1YMR200W RPP0P05317 312 aaKnown RBP4.33□□□□□ -1.72
ROT1YMR200W QCR2P07257 368 aa4.33□□□□□ -1.72
ROT1YMR200W YAP1P19880 650 aaKnown RBP4.33□□□□□ -1.72
ROT1YMR200W YCR007CP25354 239 aa4.33□□□□□ -1.72
ROT1YMR200W NAM9P27929 486 aa4.33□□□□□ -1.72
ROT1YMR200W SSO1P32867 290 aa4.33□□□□□ -1.72
ROT1YMR200W YKL063CP35725 167 aa4.33□□□□□ -1.72
ROT1YMR200W FZO1P38297 855 aa4.33□□□□□ -1.72
ROT1YMR200W YHR035WP38769 630 aa4.33□□□□□ -1.72
ROT1YMR200W SIM1P40472 476 aa4.33□□□□□ -1.72
ROT1YMR200W POG1P40473 351 aa4.33□□□□□ -1.72
ROT1YMR200W YIA6P40556 373 aa4.33□□□□□ -1.72
ROT1YMR200W GAB1P41733 394 aa4.33□□□□□ -1.72
ROT1YMR200W YCH1P42937 148 aa4.33□□□□□ -1.72
ROT1YMR200W TIS11P47977 285 aa4.33□□□□□ -1.72
ROT1YMR200W NIF3P53081 288 aa4.33□□□□□ -1.72
ROT1YMR200W SEC13Q04491 297 aaKnown RBP4.33□□□□□ -1.72
ROT1YMR200W ARP10Q04549 284 aa4.33□□□□□ -1.72
ROT1YMR200W SWF1Q04629 336 aa4.33□□□□□ -1.72
ROT1YMR200W CSM4Q08955 156 aa4.33□□□□□ -1.72
ROT1YMR200W CRC1Q12289 327 aa4.33□□□□□ -1.72
ROT1YMR200W IZH4Q99393 312 aa4.33□□□□□ -1.72
ROT1YMR200W POM152P39685 1337 aa4.32□□□□□ -1.72
ROT1YMR200W TUS1Q06412 1307 aa4.32□□□□□ -1.72
ROT1YMR200W TEF1P02994 458 aaKnown RBP4.32□□□□□ -1.72
ROT1YMR200W YAR066WP0CX18 203 aa4.32□□□□□ -1.72
ROT1YMR200W YHR214WP0CX19 203 aa4.32□□□□□ -1.72
ROT1YMR200W NAM2P11325 894 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms