RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C RPB9P27999 122 aa1.86□□□□□ -2.11
UBX4YMR067C ERG9P29704 444 aa1.86□□□□□ -2.11
UBX4YMR067C YKL187CP34231 750 aa1.86□□□□□ -2.11
UBX4YMR067C YGP1P38616 354 aaKnown RBP1.86□□□□□ -2.11
UBX4YMR067C LRP1P38801 184 aaKnown RBP1.86□□□□□ -2.11
UBX4YMR067C ATG7P38862 630 aa1.86□□□□□ -2.11
UBX4YMR067C ASG7P46993 209 aa1.86□□□□□ -2.11
UBX4YMR067C SHE4P51534 789 aa1.86□□□□□ -2.11
UBX4YMR067C SPH1Q06160 661 aa1.86□□□□□ -2.11
UBX4YMR067C RLP24Q07915 199 aaKnown RBP1.86□□□□□ -2.11
UBX4YMR067C TAF10Q12030 206 aa1.86□□□□□ -2.11
UBX4YMR067C MIG1P27705 504 aa1.85□□□□□ -2.11
UBX4YMR067C MKK1P32490 508 aa1.85□□□□□ -2.11
UBX4YMR067C ZRT3P34240 503 aa1.85□□□□□ -2.11
UBX4YMR067C YMR244WQ04018 355 aa1.85□□□□□ -2.11
UBX4YMR067C SMP3Q04174 516 aa1.85□□□□□ -2.11
UBX4YMR067C YDR222WQ04925 415 aa1.85□□□□□ -2.11
UBX4YMR067C ARR1Q06596 294 aa1.85□□□□□ -2.11
UBX4YMR067C PAR32Q12515 295 aaKnown RBP1.85□□□□□ -2.11
UBX4YMR067C CTA1P15202 515 aa1.84□□□□□ -2.11
UBX4YMR067C THR4P16120 514 aaKnown RBP1.84□□□□□ -2.11
UBX4YMR067C MNE1P24720 663 aa1.84□□□□□ -2.11
UBX4YMR067C PUP2P32379 260 aa1.84□□□□□ -2.11
UBX4YMR067C MRPS5P33759 307 aa1.84□□□□□ -2.11
UBX4YMR067C RFT1P38206 574 aaPredicted RBP1.84□□□□□ -2.11
UBX4YMR067C SMC2P38989 1170 aaKnown RBP1.84□□□□□ -2.11
UBX4YMR067C GDI1P39958 451 aaKnown RBP1.84□□□□□ -2.11
UBX4YMR067C SLM1P40485 686 aa1.84□□□□□ -2.11
UBX4YMR067C YDR114CQ04597 100 aa1.84□□□□□ -2.11
UBX4YMR067C GTO3Q04806 366 aa1.84□□□□□ -2.11
UBX4YMR067C YPL264CQ08980 353 aa1.84□□□□□ -2.11
UBX4YMR067C RPN6Q12377 434 aa1.84□□□□□ -2.11
UBX4YMR067C TFB5Q3E7C1 72 aaPredicted RBP1.84□□□□□ -2.11
UBX4YMR067C MAS1P10507 462 aa1.83□□□□□ -2.12
UBX4YMR067C CKI1P20485 582 aa1.83□□□□□ -2.12
UBX4YMR067C DAL81P21657 970 aa1.83□□□□□ -2.12
UBX4YMR067C FAA1P30624 700 aaKnown RBP1.83□□□□□ -2.12
UBX4YMR067C HMX1P32339 317 aa1.83□□□□□ -2.12
UBX4YMR067C ATG12P38316 186 aa1.83□□□□□ -2.12
UBX4YMR067C SMF2P38778 549 aa1.83□□□□□ -2.12
UBX4YMR067C YMR134WP40207 237 aa1.83□□□□□ -2.12
UBX4YMR067C SDS23P53172 527 aa1.83□□□□□ -2.12
UBX4YMR067C CAX4P53223 239 aa1.83□□□□□ -2.12
UBX4YMR067C NAT4Q04751 285 aa1.83□□□□□ -2.12
UBX4YMR067C APC5Q08683 685 aa1.83□□□□□ -2.12
UBX4YMR067C MHP1P43638 1398 aa1.83□□□□□ -2.12
UBX4YMR067C PHO84P25297 587 aaKnown RBP1.82□□□□□ -2.12
UBX4YMR067C CSE1P33307 960 aa1.82□□□□□ -2.12
UBX4YMR067C YHR122WP38829 231 aa1.82□□□□□ -2.12
UBX4YMR067C YCH1P42937 148 aa1.82□□□□□ -2.12
UBX4YMR067C YHC3P47040 408 aa1.82□□□□□ -2.12
UBX4YMR067C YGL118CP53132 145 aa1.82□□□□□ -2.12
UBX4YMR067C FMP48P53233 369 aa1.82□□□□□ -2.12
UBX4YMR067C YNR068CP53754 272 aa1.82□□□□□ -2.12
UBX4YMR067C TRM10Q12400 293 aa1.82□□□□□ -2.12
UBX4YMR067C TDH2P00358 332 aaKnown RBP1.81□□□□□ -2.12
UBX4YMR067C TDH3P00359 332 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
UBX4YMR067C MET2P08465 486 aa1.81□□□□□ -2.12
UBX4YMR067C DAP2P18962 818 aa1.81□□□□□ -2.12
UBX4YMR067C UBA1P22515 1024 aaKnown RBP1.81□□□□□ -2.12
UBX4YMR067C MXR2P25566 168 aa1.81□□□□□ -2.12
UBX4YMR067C ARO4P32449 370 aaKnown RBP1.81□□□□□ -2.12
UBX4YMR067C YKR032WP36127 104 aa1.81□□□□□ -2.12
UBX4YMR067C PEX32P38292 413 aa1.81□□□□□ -2.12
UBX4YMR067C CTM1P38818 585 aa1.81□□□□□ -2.12
UBX4YMR067C ASP1P38986 381 aaPredicted RBP1.81□□□□□ -2.12
UBX4YMR067C SEC28P40509 296 aaKnown RBP1.81□□□□□ -2.12
UBX4YMR067C YMR310CQ04867 317 aaPredicted RBP1.81□□□□□ -2.12
UBX4YMR067C GLE1Q12315 538 aa1.81□□□□□ -2.12
UBX4YMR067C HSP82P02829 709 aaKnown RBP1.8□□□□□ -2.12
UBX4YMR067C UTR1P21373 530 aa1.8□□□□□ -2.12
UBX4YMR067C RSA4P25382 515 aaKnown RBP1.8□□□□□ -2.12
UBX4YMR067C DCC1P25559 380 aa1.8□□□□□ -2.12
UBX4YMR067C RDS1P25611 832 aa1.8□□□□□ -2.12
UBX4YMR067C YFR045WP43617 309 aa1.8□□□□□ -2.12
UBX4YMR067C TPC1P53257 314 aa1.8□□□□□ -2.12
UBX4YMR067C DXO1Q06349 442 aa1.8□□□□□ -2.12
UBX4YMR067C DTD1Q07648 150 aaKnown RBP1.8□□□□□ -2.12
UBX4YMR067C TFC7Q12415 435 aa1.8□□□□□ -2.12
UBX4YMR067C PRM4Q12498 284 aa1.8□□□□□ -2.12
UBX4YMR067C SFG1Q12507 346 aa1.8□□□□□ -2.12
UBX4YMR067C BEM2P39960 2167 aaKnown RBP1.79□□□□□ -2.12
UBX4YMR067C KTI12P34253 313 aaKnown RBP1.79□□□□□ -2.12
UBX4YMR067C MPE1P35728 441 aaKnown RBP1.79□□□□□ -2.12
UBX4YMR067C YSW1P38280 609 aa1.79□□□□□ -2.12
UBX4YMR067C MMS21P38632 267 aa1.79□□□□□ -2.12
UBX4YMR067C ECO1P43605 281 aa1.79□□□□□ -2.12
UBX4YMR067C PMT4P46971 762 aa1.79□□□□□ -2.12
UBX4YMR067C RGM1Q00453 211 aa1.79□□□□□ -2.12
UBX4YMR067C UTP6Q02354 440 aaKnown RBP1.79□□□□□ -2.12
UBX4YMR067C MIX17Q03667 156 aa1.79□□□□□ -2.12
UBX4YMR067C PEX30Q06169 523 aa1.79□□□□□ -2.12
UBX4YMR067C CLP1Q08685 445 aaPredicted RBP1.79□□□□□ -2.12
UBX4YMR067C RAD1P06777 1100 aa1.78□□□□□ -2.12
UBX4YMR067C BUD2P33314 1104 aa1.78□□□□□ -2.12
UBX4YMR067C DSE1P40077 573 aa1.78□□□□□ -2.12
UBX4YMR067C RPA34P47006 233 aaPredicted RBP1.78□□□□□ -2.12
UBX4YMR067C RSC1P53236 928 aa1.78□□□□□ -2.12
UBX4YMR067C HCH1P53834 153 aa1.78□□□□□ -2.12
UBX4YMR067C YNL040WP53960 456 aaPredicted RBP1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms