RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W PMT5P52867 743 aa2.11□□□□□ -2.07
CSI1YMR025W YMR010WQ03687 405 aa2.11□□□□□ -2.07
CSI1YMR025W DCI1Q08558 271 aa2.11□□□□□ -2.07
CSI1YMR025W UAF30Q08747 228 aa2.11□□□□□ -2.07
CSI1YMR025W SPE3Q12074 293 aaKnown RBP2.11□□□□□ -2.07
CSI1YMR025W PAR32Q12515 295 aaKnown RBP2.11□□□□□ -2.07
CSI1YMR025W YOR338WQ99326 363 aa2.11□□□□□ -2.07
CSI1YMR025W SIR4P11978 1358 aa2.1□□□□□ -2.07
CSI1YMR025W DAL5P15365 543 aa2.1□□□□□ -2.07
CSI1YMR025W LTV1P34078 463 aa2.1□□□□□ -2.07
CSI1YMR025W BUD27P43573 796 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
CSI1YMR025W YJL055WP47044 245 aa2.1□□□□□ -2.07
CSI1YMR025W YJR030CP47101 745 aa2.1□□□□□ -2.07
CSI1YMR025W CDH1P53197 566 aa2.1□□□□□ -2.07
CSI1YMR025W URC2Q04411 772 aa2.1□□□□□ -2.07
CSI1YMR025W DIB1Q06819 143 aaPredicted RBP2.1□□□□□ -2.07
CSI1YMR025W RPN5Q12250 445 aaKnown RBP2.1□□□□□ -2.07
CSI1YMR025W MHP1P43638 1398 aa2.1□□□□□ -2.07
CSI1YMR025W RPS23AP0CX29 145 aaKnown RBP2.09□□□□□ -2.07
CSI1YMR025W RPS23BP0CX30 145 aa2.09□□□□□ -2.07
CSI1YMR025W TOA2P32774 122 aa2.09□□□□□ -2.07
CSI1YMR025W YSC83P32792 385 aa2.09□□□□□ -2.07
CSI1YMR025W PEX5P35056 612 aa2.09□□□□□ -2.07
CSI1YMR025W COS9P36034 407 aa2.09□□□□□ -2.07
CSI1YMR025W SCC4P40090 624 aa2.09□□□□□ -2.07
CSI1YMR025W SEC27P41811 889 aaKnown RBP2.09□□□□□ -2.07
CSI1YMR025W UFE1P41834 346 aa2.09□□□□□ -2.07
CSI1YMR025W YJR054WP47114 497 aa2.09□□□□□ -2.07
CSI1YMR025W SED5Q01590 340 aa2.09□□□□□ -2.07
CSI1YMR025W ERO1Q03103 563 aa2.09□□□□□ -2.07
CSI1YMR025W YRF1-2P40105 1681 aa2.09□□□□□ -2.08
CSI1YMR025W URB1P34241 1764 aaKnown RBP2.08□□□□□ -2.08
CSI1YMR025W HEM4P06174 275 aa2.08□□□□□ -2.08
CSI1YMR025W RRP7P25368 297 aaPredicted RBP2.08□□□□□ -2.08
CSI1YMR025W ICL1P28240 557 aaPredicted RBP2.08□□□□□ -2.08
CSI1YMR025W RAD23P32628 398 aaKnown RBP2.08□□□□□ -2.08
CSI1YMR025W MDL1P33310 695 aa2.08□□□□□ -2.08
CSI1YMR025W YDR541CQ03049 344 aa2.08□□□□□ -2.08
CSI1YMR025W SXM1Q04175 944 aaKnown RBP2.08□□□□□ -2.08
CSI1YMR025W VTI1Q04338 217 aa2.08□□□□□ -2.08
CSI1YMR025W YOL029CQ08187 201 aa2.08□□□□□ -2.08
CSI1YMR025W LDS2Q08218 356 aa2.08□□□□□ -2.08
CSI1YMR025W YRF1-3P0CX14 1859 aa2.07□□□□□ -2.08
CSI1YMR025W YRF1-7P0CX15 1859 aa2.07□□□□□ -2.08
CSI1YMR025W YRF1-6P53819 1859 aa2.07□□□□□ -2.08
CSI1YMR025W STE2D6VTK4 431 aa2.07□□□□□ -2.08
CSI1YMR025W RPL1AP0CX43 217 aaKnown RBP2.07□□□□□ -2.08
CSI1YMR025W RPL1BP0CX44 217 aaKnown RBP2.07□□□□□ -2.08
CSI1YMR025W YGP1P38616 354 aaKnown RBP2.07□□□□□ -2.08
CSI1YMR025W GDI1P39958 451 aaKnown RBP2.07□□□□□ -2.08
CSI1YMR025W JEM1P40358 645 aa2.07□□□□□ -2.08
CSI1YMR025W MEH1Q02205 184 aa2.07□□□□□ -2.08
CSI1YMR025W RPL16AP26784 199 aaKnown RBP2.06□□□□□ -2.08
CSI1YMR025W RXT2P38255 430 aa2.06□□□□□ -2.08
CSI1YMR025W SEC28P40509 296 aaKnown RBP2.06□□□□□ -2.08
CSI1YMR025W RTT102P53330 157 aa2.06□□□□□ -2.08
CSI1YMR025W VPS9P54787 451 aa2.06□□□□□ -2.08
CSI1YMR025W API2Q04413 109 aa2.06□□□□□ -2.08
CSI1YMR025W AAD15Q08361 143 aa2.06□□□□□ -2.08
CSI1YMR025W YDL109CQ12103 647 aa2.06□□□□□ -2.08
CSI1YMR025W YDL211CQ12121 372 aa2.06□□□□□ -2.08
CSI1YMR025W RNA1P11745 407 aaKnown RBP2.05□□□□□ -2.08
CSI1YMR025W YPT35P38815 214 aaKnown RBP2.05□□□□□ -2.08
CSI1YMR025W BDH1P39714 382 aa2.05□□□□□ -2.08
CSI1YMR025W YIL089WP40500 205 aa2.05□□□□□ -2.08
CSI1YMR025W YNL050CP53952 270 aa2.05□□□□□ -2.08
CSI1YMR025W NDL1Q06568 189 aa2.05□□□□□ -2.08
CSI1YMR025W ALE1Q08548 619 aa2.05□□□□□ -2.08
CSI1YMR025W TY4B-HP0C2J7 1802 aa2.05□□□□□ -2.08
CSI1YMR025W TY4B-JP47024 1803 aa2.05□□□□□ -2.08
CSI1YMR025W TEL1P38110 2787 aa2.04□□□□□ -2.08
CSI1YMR025W COX10P21592 462 aa2.04□□□□□ -2.08
CSI1YMR025W ALK2P32789 676 aaPredicted RBP2.04□□□□□ -2.08
CSI1YMR025W MNL1P38888 796 aa2.04□□□□□ -2.08
CSI1YMR025W MLH1P38920 769 aa2.04□□□□□ -2.08
CSI1YMR025W CWC22P53333 577 aaKnown RBP2.04□□□□□ -2.08
CSI1YMR025W FKS3Q04952 1785 aa2.03□□□□□ -2.08
CSI1YMR025W APC1P53886 1748 aa2.03□□□□□ -2.08
CSI1YMR025W NUM1Q00402 2748 aa2.03□□□□□ -2.08
CSI1YMR025W SSK22P25390 1331 aaPredicted RBP2.03□□□□□ -2.08
CSI1YMR025W HSP82P02829 709 aaKnown RBP2.03□□□□□ -2.08
CSI1YMR025W RPL23AP0CX41 137 aaKnown RBP2.03□□□□□ -2.08
CSI1YMR025W RPL23BP0CX42 137 aaKnown RBP2.03□□□□□ -2.08
CSI1YMR025W PUP2P32379 260 aa2.03□□□□□ -2.08
CSI1YMR025W TKL2P33315 681 aa2.03□□□□□ -2.08
CSI1YMR025W SLT2Q00772 484 aa2.03□□□□□ -2.08
CSI1YMR025W TRM44Q02648 567 aaKnown RBP2.03□□□□□ -2.08
CSI1YMR025W RCF1Q03713 159 aa2.03□□□□□ -2.08
CSI1YMR025W UBX2Q04228 584 aa2.03□□□□□ -2.08
CSI1YMR025W NOP6Q07623 225 aaKnown RBP2.03□□□□□ -2.08
CSI1YMR025W FRE6Q12473 712 aa2.03□□□□□ -2.08
CSI1YMR025W TAO3P40468 2376 aa2.03□□□□□ -2.08
CSI1YMR025W YPR117WQ06116 2489 aa2.02□□□□□ -2.09
CSI1YMR025W HPR1P17629 752 aaKnown RBP2.02□□□□□ -2.09
CSI1YMR025W PHO84P25297 587 aaKnown RBP2.02□□□□□ -2.09
CSI1YMR025W SWI3P32591 825 aa2.02□□□□□ -2.09
CSI1YMR025W BLI1P35727 113 aa2.02□□□□□ -2.09
CSI1YMR025W KAP104P38217 918 aaKnown RBP2.02□□□□□ -2.09
CSI1YMR025W YSW1P38280 609 aa2.02□□□□□ -2.09
CSI1YMR025W SPP381P38282 291 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 109.7 ms