RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	OST6	Q03723	332 aa		14	□□□□□ -0.17
CCC1	YLR220W	HDA2	Q06629	674 aa		14	□□□□□ -0.17
CCC1	YLR220W	YDL177C	Q12257	170 aa		14	□□□□□ -0.17
CCC1	YLR220W	HER1	Q12276	1246 aa		14	□□□□□ -0.17
CCC1	YLR220W	SWM1	Q12379	170 aa		14	□□□□□ -0.17
CCC1	YLR220W	NUP1	P20676	1076 aa		13.99	□□□□□ -0.17
CCC1	YLR220W	AIM17	P23180	465 aa	Known RBP	13.99	□□□□□ -0.17
CCC1	YLR220W	YER010C	P40011	234 aa		13.99	□□□□□ -0.17
CCC1	YLR220W	GRX5	Q02784	150 aa		13.99	□□□□□ -0.17
CCC1	YLR220W	MRPL1	Q04599	285 aa		13.99	□□□□□ -0.17
CCC1	YLR220W	SNO4	Q04902	237 aa		13.99	□□□□□ -0.17
CCC1	YLR220W	HSP33	Q08914	237 aa	Known RBP	13.99	□□□□□ -0.17
CCC1	YLR220W	GRE1	Q08969	168 aa		13.99	□□□□□ -0.17
CCC1	YLR220W	HSP32	Q08992	237 aa		13.99	□□□□□ -0.17
CCC1	YLR220W	YOR289W	Q12012	251 aa	Predicted RBP	13.99	□□□□□ -0.17
CCC1	YLR220W	URE2	P23202	354 aa	Known RBP	13.98	□□□□□ -0.17
CCC1	YLR220W	PRP28	P23394	588 aa		13.98	□□□□□ -0.17
CCC1	YLR220W	RTC2	P38279	296 aa		13.98	□□□□□ -0.17
CCC1	YLR220W	CHL4	P38907	458 aa		13.98	□□□□□ -0.17
CCC1	YLR220W	GDI1	P39958	451 aa	Known RBP	13.98	□□□□□ -0.17
CCC1	YLR220W	PDR16	P53860	351 aa	Known RBP	13.98	□□□□□ -0.17
CCC1	YLR220W	SPO19	Q03029	223 aa		13.98	□□□□□ -0.17
CCC1	YLR220W	TFB3	Q03290	321 aa		13.98	□□□□□ -0.17
CCC1	YLR220W	RSA3	Q05942	220 aa	Known RBP	13.98	□□□□□ -0.17
CCC1	YLR220W	YPQ2	Q06328	317 aa		13.98	□□□□□ -0.17
CCC1	YLR220W	BTS1	Q12051	335 aa		13.98	□□□□□ -0.17
CCC1	YLR220W	MTR10	Q99189	972 aa		13.98	□□□□□ -0.17
CCC1	YLR220W	RPL7A	P05737	244 aa	Known RBP	13.97	□□□□□ -0.17
CCC1	YLR220W	RPS20	P38701	121 aa	Known RBP	13.97	□□□□□ -0.17
CCC1	YLR220W	SSZ1	P38788	538 aa	Known RBP	13.97	□□□□□ -0.17
CCC1	YLR220W	TDA11	P38854	504 aa		13.97	□□□□□ -0.17
CCC1	YLR220W	AVT6	P40074	448 aa		13.97	□□□□□ -0.17
CCC1	YLR220W	PHB1	P40961	287 aa		13.97	□□□□□ -0.17
CCC1	YLR220W	SPC19	Q03954	165 aa		13.97	□□□□□ -0.17
CCC1	YLR220W	RPL7B	Q12213	244 aa	Known RBP	13.97	□□□□□ -0.17
CCC1	YLR220W	CNA1	P23287	553 aa		13.96	□□□□□ -0.17
CCC1	YLR220W	PRE2	P30656	287 aa	Known RBP	13.96	□□□□□ -0.17
CCC1	YLR220W	BAP2	P38084	609 aa		13.96	□□□□□ -0.17
CCC1	YLR220W	ZRG8	P40021	1076 aa		13.96	□□□□□ -0.17
CCC1	YLR220W	TMA20	P89886	181 aa	Predicted RBP	13.96	□□□□□ -0.17
CCC1	YLR220W	COX20	Q04935	205 aa		13.96	□□□□□ -0.17
CCC1	YLR220W	YPL191C	Q08930	360 aa		13.96	□□□□□ -0.17
CCC1	YLR220W	YOR343C	Q12484	108 aa		13.96	□□□□□ -0.17
CCC1	YLR220W	RPB10	P22139	70 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	ATS1	P31386	333 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	YEF1	P32622	495 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	REE1	P40893	198 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	VNX1	P42839	908 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	BPL1	P48445	690 aa	Predicted RBP	13.95	□□□□□ -0.18
CCC1	YLR220W	SCS7	Q03529	384 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	MIX14	Q04341	121 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	ATG17	Q06410	417 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	MLC2	Q06580	163 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	IRC19	Q07843	230 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	YLR040C	Q07988	224 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	YGK3	Q12222	375 aa	Predicted RBP	13.95	□□□□□ -0.18
CCC1	YLR220W	PNS1	Q12412	539 aa		13.95	□□□□□ -0.18
CCC1	YLR220W	PHO80	P20052	293 aa		13.94	□□□□□ -0.18
CCC1	YLR220W	RPB8	P20436	146 aa		13.94	□□□□□ -0.18
CCC1	YLR220W	NFS1	P25374	497 aa		13.94	□□□□□ -0.18
CCC1	YLR220W	ECM4	P36156	370 aa		13.94	□□□□□ -0.18
CCC1	YLR220W	KRE29	P40026	464 aa		13.94	□□□□□ -0.18
CCC1	YLR220W	YTA6	P40328	754 aa		13.94	□□□□□ -0.18
CCC1	YLR220W	YPL039W	Q03080	316 aa		13.94	□□□□□ -0.18
CCC1	YLR220W	YGR161W-C	Q3E744	92 aa		13.94	□□□□□ -0.18
CCC1	YLR220W	CDC9	P04819	755 aa		13.93	□□□□□ -0.18
CCC1	YLR220W	YFR010W-A	P0C5N0	62 aa		13.93	□□□□□ -0.18
CCC1	YLR220W	IDP1	P21954	428 aa	Known RBP	13.93	□□□□□ -0.18
CCC1	YLR220W	VMA6	P32366	345 aa	Known RBP	13.93	□□□□□ -0.18
CCC1	YLR220W	PTI1	P39927	425 aa	Predicted RBP	13.93	□□□□□ -0.18
CCC1	YLR220W	IRC7	P43623	340 aa		13.93	□□□□□ -0.18
CCC1	YLR220W	COS10	P52924	374 aa		13.93	□□□□□ -0.18
CCC1	YLR220W	YGL260W	P53056	76 aa		13.93	□□□□□ -0.18
CCC1	YLR220W	SNZ1	Q03148	297 aa		13.93	□□□□□ -0.18
CCC1	YLR220W	SDC1	Q03323	175 aa		13.93	□□□□□ -0.18
CCC1	YLR220W	RDL2	Q08742	149 aa	Known RBP	13.93	□□□□□ -0.18
CCC1	YLR220W	PEP4	P07267	405 aa	Known RBP	13.92	□□□□□ -0.18
CCC1	YLR220W	MRPL16	P38064	232 aa		13.92	□□□□□ -0.18
CCC1	YLR220W	FET3	P38993	636 aa		13.92	□□□□□ -0.18
CCC1	YLR220W	YEL057C	P39983	233 aa		13.92	□□□□□ -0.18
CCC1	YLR220W	NTA1	P40354	457 aa		13.92	□□□□□ -0.18
CCC1	YLR220W	NQM1	P53228	333 aa	Predicted RBP	13.92	□□□□□ -0.18
CCC1	YLR220W	PGA1	P53896	198 aa		13.92	□□□□□ -0.18
CCC1	YLR220W	NKP1	Q12493	238 aa		13.92	□□□□□ -0.18
CCC1	YLR220W	FLO9	P39712	1322 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	ENA1	P13587	1091 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	CTA1	P15202	515 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	SUR1	P33300	382 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	MDM31	P38880	579 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	RPS26A	P39938	119 aa	Known RBP	13.91	□□□□□ -0.18
CCC1	YLR220W	RPS26B	P39939	119 aa	Known RBP	13.91	□□□□□ -0.18
CCC1	YLR220W	BUD17	P53727	317 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	ENA2	Q01896	1091 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	YDR179W-A	Q03983	463 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	ARP10	Q04549	284 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	EMG1	Q06287	252 aa	Known RBP	13.91	□□□□□ -0.18
CCC1	YLR220W	YRM1	Q12340	786 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	PCL9	Q12477	304 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	ENA5	Q12691	1091 aa		13.91	□□□□□ -0.18
CCC1	YLR220W	PRP8	P33334	2413 aa	Known RBP	13.91	□□□□□ -0.18

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms