RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C PRM1P53835 661 aa2.12□□□□□ -2.07
ATG38YLR211C AQR1P53943 586 aa2.12□□□□□ -2.07
ATG38YLR211C SMD1Q02260 146 aaPredicted RBP2.12□□□□□ -2.07
ATG38YLR211C RPL6AQ02326 176 aaKnown RBP2.12□□□□□ -2.07
ATG38YLR211C ABZ2Q03266 374 aa2.12□□□□□ -2.07
ATG38YLR211C AIM33Q04516 312 aa2.12□□□□□ -2.07
ATG38YLR211C MSK1P32048 576 aa2.11□□□□□ -2.07
ATG38YLR211C PCH2P38126 564 aa2.11□□□□□ -2.07
ATG38YLR211C TAE1P38340 232 aa2.11□□□□□ -2.07
ATG38YLR211C YPT35P38815 214 aaKnown RBP2.11□□□□□ -2.07
ATG38YLR211C RBG1P39729 369 aa2.11□□□□□ -2.07
ATG38YLR211C PDR16P53860 351 aaKnown RBP2.11□□□□□ -2.07
ATG38YLR211C YNL143CP53908 130 aa2.11□□□□□ -2.07
ATG38YLR211C PRO2P54885 456 aaKnown RBP2.11□□□□□ -2.07
ATG38YLR211C APC4Q04601 652 aa2.11□□□□□ -2.07
ATG38YLR211C YOL075CQ08234 1294 aa2.11□□□□□ -2.07
ATG38YLR211C ALE1Q08548 619 aa2.11□□□□□ -2.07
ATG38YLR211C AIM45Q12480 344 aaKnown RBP2.11□□□□□ -2.07
ATG38YLR211C TFB5Q3E7C1 72 aaPredicted RBP2.11□□□□□ -2.07
ATG38YLR211C INO80P53115 1489 aa2.11□□□□□ -2.07
ATG38YLR211C STE3P06783 470 aa2.1□□□□□ -2.07
ATG38YLR211C GRR1P24814 1151 aa2.1□□□□□ -2.07
ATG38YLR211C RPB9P27999 122 aa2.1□□□□□ -2.07
ATG38YLR211C EFB1P32471 206 aaKnown RBP2.1□□□□□ -2.07
ATG38YLR211C YHR182WP38870 785 aa2.1□□□□□ -2.07
ATG38YLR211C RRG9P40156 214 aa2.1□□□□□ -2.07
ATG38YLR211C ECM19Q06011 112 aa2.1□□□□□ -2.07
ATG38YLR211C RTC5Q12108 567 aaKnown RBP2.1□□□□□ -2.07
ATG38YLR211C RRP36Q12481 300 aaPredicted RBP2.1□□□□□ -2.07
ATG38YLR211C SCH9P11792 824 aaKnown RBP2.09□□□□□ -2.07
ATG38YLR211C TAL1P15019 335 aaKnown RBP2.09□□□□□ -2.07
ATG38YLR211C CUP2P15315 225 aa2.09□□□□□ -2.07
ATG38YLR211C CPT1P17898 393 aa2.09□□□□□ -2.07
ATG38YLR211C UBA1P22515 1024 aaKnown RBP2.09□□□□□ -2.07
ATG38YLR211C LSG1P53145 640 aaKnown RBP2.09□□□□□ -2.07
ATG38YLR211C LST7P53237 242 aa2.09□□□□□ -2.07
ATG38YLR211C ERV25P54837 211 aaKnown RBP2.09□□□□□ -2.07
ATG38YLR211C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
ATG38YLR211C YMR244WQ04018 355 aa2.09□□□□□ -2.07
ATG38YLR211C TAF10Q12030 206 aa2.09□□□□□ -2.07
ATG38YLR211C OM45P16547 393 aa2.08□□□□□ -2.08
ATG38YLR211C FAA1P30624 700 aaKnown RBP2.08□□□□□ -2.08
ATG38YLR211C YDR089WP38966 869 aa2.08□□□□□ -2.08
ATG38YLR211C YFR018CP43599 363 aa2.08□□□□□ -2.08
ATG38YLR211C UTP6Q02354 440 aaKnown RBP2.08□□□□□ -2.08
ATG38YLR211C YMR111CQ04461 462 aaPredicted RBP2.08□□□□□ -2.08
ATG38YLR211C YFH1Q07540 174 aa2.08□□□□□ -2.08
ATG38YLR211C PEX27Q08580 376 aa2.08□□□□□ -2.08
ATG38YLR211C YOR012WQ12351 137 aa2.08□□□□□ -2.08
ATG38YLR211C RPN6Q12377 434 aa2.08□□□□□ -2.08
ATG38YLR211C PFK27Q12471 397 aaPredicted RBP2.08□□□□□ -2.08
ATG38YLR211C FSH3Q99369 266 aa2.08□□□□□ -2.08
ATG38YLR211C YPR096CO13587 100 aa2.07□□□□□ -2.08
ATG38YLR211C GAL7P08431 366 aa2.07□□□□□ -2.08
ATG38YLR211C DBP3P20447 523 aaKnown RBP2.07□□□□□ -2.08
ATG38YLR211C DAL80P26343 269 aa2.07□□□□□ -2.08
ATG38YLR211C URA10P30402 227 aa2.07□□□□□ -2.08
ATG38YLR211C GDT1P38301 280 aaPredicted RBP2.07□□□□□ -2.08
ATG38YLR211C YCH1P42937 148 aa2.07□□□□□ -2.08
ATG38YLR211C MPS2P53159 387 aa2.07□□□□□ -2.08
ATG38YLR211C INP1Q03694 420 aa2.07□□□□□ -2.08
ATG38YLR211C UTP15Q04305 513 aaKnown RBP2.07□□□□□ -2.08
ATG38YLR211C GTO3Q04806 366 aa2.07□□□□□ -2.08
ATG38YLR211C RLP24Q07915 199 aaKnown RBP2.07□□□□□ -2.08
ATG38YLR211C SFG1Q12507 346 aa2.07□□□□□ -2.08
ATG38YLR211C DFM1Q12743 341 aaKnown RBP2.07□□□□□ -2.08
ATG38YLR211C VPS63O13549 108 aa2.06□□□□□ -2.08
ATG38YLR211C CKI1P20485 582 aa2.06□□□□□ -2.08
ATG38YLR211C SAG1P20840 650 aa2.06□□□□□ -2.08
ATG38YLR211C ZRT3P34240 503 aa2.06□□□□□ -2.08
ATG38YLR211C MRPL40P36534 297 aa2.06□□□□□ -2.08
ATG38YLR211C IST2P38250 946 aa2.06□□□□□ -2.08
ATG38YLR211C RPA34P47006 233 aaPredicted RBP2.06□□□□□ -2.08
ATG38YLR211C GRX3Q03835 250 aa2.06□□□□□ -2.08
ATG38YLR211C GMC1Q04399 608 aa2.06□□□□□ -2.08
ATG38YLR211C MGR3Q04472 501 aa2.06□□□□□ -2.08
ATG38YLR211C CSM3Q04659 317 aa2.06□□□□□ -2.08
ATG38YLR211C DIB1Q06819 143 aaPredicted RBP2.06□□□□□ -2.08
ATG38YLR211C PRP46Q12417 451 aaPredicted RBP2.06□□□□□ -2.08
ATG38YLR211C MKK1P32490 508 aa2.05□□□□□ -2.08
ATG38YLR211C EFM1P38732 585 aa2.05□□□□□ -2.08
ATG38YLR211C TPC1P53257 314 aa2.05□□□□□ -2.08
ATG38YLR211C SMP3Q04174 516 aa2.05□□□□□ -2.08
ATG38YLR211C VPS20Q04272 221 aa2.05□□□□□ -2.08
ATG38YLR211C RPN8Q08723 338 aaKnown RBP2.05□□□□□ -2.08
ATG38YLR211C MRPL23Q12487 163 aaPredicted RBP2.05□□□□□ -2.08
ATG38YLR211C NBL1Q3E7Y6 73 aa2.05□□□□□ -2.08
ATG38YLR211C CBP2P03874 630 aaPredicted RBP2.04□□□□□ -2.08
ATG38YLR211C RDS1P25611 832 aa2.04□□□□□ -2.08
ATG38YLR211C ALK2P32789 676 aaPredicted RBP2.04□□□□□ -2.08
ATG38YLR211C TKL2P33315 681 aa2.04□□□□□ -2.08
ATG38YLR211C MRPS5P33759 307 aa2.04□□□□□ -2.08
ATG38YLR211C AIM20P40451 204 aa2.04□□□□□ -2.08
ATG38YLR211C SNL1P40548 159 aa2.04□□□□□ -2.08
ATG38YLR211C NRM1P53718 249 aa2.04□□□□□ -2.08
ATG38YLR211C ARP5P53946 755 aa2.04□□□□□ -2.08
ATG38YLR211C TIM11P81449 96 aaPredicted RBP2.04□□□□□ -2.08
ATG38YLR211C YDR222WQ04925 415 aa2.04□□□□□ -2.08
ATG38YLR211C CUR1Q06469 252 aa2.04□□□□□ -2.08
ATG38YLR211C DAL81P21657 970 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms