RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C PUB1P32588 453 aaKnown RBP RIP-Chip data10.26□□□□□ -0.77not detected
SPT8YLR055C MRPL37P36532 105 aa10.26□□□□□ -0.77
SPT8YLR055C RPS20P38701 121 aaKnown RBP10.26□□□□□ -0.77
SPT8YLR055C YAL037WP39728 267 aa10.26□□□□□ -0.77
SPT8YLR055C APQ12P40532 138 aa10.26□□□□□ -0.77
SPT8YLR055C BAP3P41815 604 aa10.26□□□□□ -0.77
SPT8YLR055C MRPS18P42847 217 aa10.26□□□□□ -0.77
SPT8YLR055C SDT1P53078 280 aa10.26□□□□□ -0.77
SPT8YLR055C SKI7Q08491 747 aaPredicted RBP10.26□□□□□ -0.77
SPT8YLR055C UTR1P21373 530 aa10.25□□□□□ -0.77
SPT8YLR055C YCK1P23291 538 aa10.25□□□□□ -0.77
SPT8YLR055C EXG1P23776 448 aaKnown RBP10.25□□□□□ -0.77
SPT8YLR055C CNB1P25296 175 aa10.25□□□□□ -0.77
SPT8YLR055C FUN26P31381 517 aa10.25□□□□□ -0.77
SPT8YLR055C SKN1P33336 771 aa10.25□□□□□ -0.77
SPT8YLR055C SDS22P36047 338 aa10.25□□□□□ -0.77
SPT8YLR055C UTH1P36135 365 aa10.25□□□□□ -0.77
SPT8YLR055C RTC2P38279 296 aa10.25□□□□□ -0.77
SPT8YLR055C YHR122WP38829 231 aa10.25□□□□□ -0.77
SPT8YLR055C RFC4P40339 323 aaKnown RBP10.25□□□□□ -0.77
SPT8YLR055C AIM25P47140 327 aa10.25□□□□□ -0.77
SPT8YLR055C AEP3Q12089 606 aa10.25□□□□□ -0.77
SPT8YLR055C SUL2Q12325 893 aa10.25□□□□□ -0.77
SPT8YLR055C YPR015CQ12531 247 aa10.25□□□□□ -0.77
SPT8YLR055C IRA2P19158 3079 aa10.25□□□□□ -0.77
SPT8YLR055C ACC1Q00955 2233 aaKnown RBP10.24□□□□□ -0.77
SPT8YLR055C MDM35O60200 86 aa10.24□□□□□ -0.77
SPT8YLR055C HOP1P20050 605 aa10.24□□□□□ -0.77
SPT8YLR055C PRP2P20095 876 aaPredicted RBP10.24□□□□□ -0.77
SPT8YLR055C YCP4P25349 247 aaKnown RBP10.24□□□□□ -0.77
SPT8YLR055C ECM31P38122 312 aa10.24□□□□□ -0.77
SPT8YLR055C TED1P40533 473 aa10.24□□□□□ -0.77
SPT8YLR055C DPB11P47027 764 aaPredicted RBP10.24□□□□□ -0.77
SPT8YLR055C ROG1P53118 685 aa10.24□□□□□ -0.77
SPT8YLR055C CAF40P53829 373 aa10.24□□□□□ -0.77
SPT8YLR055C EGD1Q02642 157 aaKnown RBP10.24□□□□□ -0.77
SPT8YLR055C DCS1Q06151 350 aa10.24□□□□□ -0.77
SPT8YLR055C YOL163WP0CF20 169 aa10.23□□□□□ -0.77
SPT8YLR055C STE12P13574 688 aa10.23□□□□□ -0.77
SPT8YLR055C CBT1P36038 271 aaPredicted RBP10.23□□□□□ -0.77
SPT8YLR055C PAU24P38155 120 aa10.23□□□□□ -0.77
SPT8YLR055C YFR020WP43600 232 aa10.23□□□□□ -0.77
SPT8YLR055C BAT2P47176 376 aaKnown RBP10.23□□□□□ -0.77
SPT8YLR055C FMP48P53233 369 aa10.23□□□□□ -0.77
SPT8YLR055C TIM44Q01852 431 aa10.23□□□□□ -0.77
SPT8YLR055C RRN11Q04712 507 aa10.23□□□□□ -0.77
SPT8YLR055C SPC3Q12133 184 aa10.23□□□□□ -0.77
SPT8YLR055C YDL007C-AQ2V2Q0 85 aa10.23□□□□□ -0.77
SPT8YLR055C CDC9P04819 755 aa10.23□□□□□ -0.77
SPT8YLR055C WBP1P33767 430 aaKnown RBP10.23□□□□□ -0.77
SPT8YLR055C CHL4P38907 458 aa10.23□□□□□ -0.77
SPT8YLR055C YMR144WP40214 342 aaKnown RBP10.23□□□□□ -0.77
SPT8YLR055C PMT5P52867 743 aa10.23□□□□□ -0.77
SPT8YLR055C COS10P52924 374 aa10.23□□□□□ -0.77
SPT8YLR055C GTF1P53260 183 aaPredicted RBP10.23□□□□□ -0.77
SPT8YLR055C CDA2Q06703 312 aa10.23□□□□□ -0.77
SPT8YLR055C RDI1Q12434 202 aa10.23□□□□□ -0.77
SPT8YLR055C PSF1Q12488 208 aa10.23□□□□□ -0.77
SPT8YLR055C YGL041W-AP0C5N3 154 aa10.22□□□□□ -0.77
SPT8YLR055C ERD1P16151 362 aa10.22□□□□□ -0.77
SPT8YLR055C ARC19P33204 171 aaKnown RBP10.22□□□□□ -0.77
SPT8YLR055C KKQ8P36004 724 aa10.22□□□□□ -0.77
SPT8YLR055C YJL068CP40363 299 aa10.22□□□□□ -0.77
SPT8YLR055C PRM10P42946 383 aa10.22□□□□□ -0.77
SPT8YLR055C PAU12P53343 120 aa10.22□□□□□ -0.77
SPT8YLR055C PGA1P53896 198 aa10.22□□□□□ -0.77
SPT8YLR055C VBA1Q04301 562 aa10.22□□□□□ -0.77
SPT8YLR055C UTP21Q06078 939 aaPredicted RBP10.22□□□□□ -0.77
SPT8YLR055C SSK1Q07084 712 aa10.22□□□□□ -0.77
SPT8YLR055C RPL1AP0CX43 217 aaKnown RBP10.21□□□□□ -0.77
SPT8YLR055C RPL1BP0CX44 217 aaKnown RBP10.21□□□□□ -0.77
SPT8YLR055C MAG1P22134 296 aaKnown RBP10.21□□□□□ -0.77
SPT8YLR055C APN1P22936 367 aa10.21□□□□□ -0.77
SPT8YLR055C NTH1P32356 751 aa10.21□□□□□ -0.77
SPT8YLR055C POP1P41812 875 aa10.21□□□□□ -0.77
SPT8YLR055C PPT1P53043 513 aa10.21□□□□□ -0.77
SPT8YLR055C GPG1P53130 126 aa10.21□□□□□ -0.77
SPT8YLR055C MTL1P53214 551 aa10.21□□□□□ -0.77
SPT8YLR055C SOK2P53438 785 aaPredicted RBP10.21□□□□□ -0.77
SPT8YLR055C YNR021WP53723 404 aaKnown RBP10.21□□□□□ -0.77
SPT8YLR055C RSF1Q05043 376 aa10.21□□□□□ -0.77
SPT8YLR055C DXO1Q06349 442 aa10.21□□□□□ -0.77
SPT8YLR055C YPR064WQ12492 139 aa10.21□□□□□ -0.77
SPT8YLR055C SEN1Q00416 2231 aaKnown RBP10.21□□□□□ -0.78
SPT8YLR055C IPP1P00817 287 aaKnown RBP10.21□□□□□ -0.78
SPT8YLR055C MRPL33P20084 86 aa10.21□□□□□ -0.78
SPT8YLR055C AXL2P38928 823 aa10.21□□□□□ -0.78
SPT8YLR055C PTC2P39966 464 aaKnown RBP10.21□□□□□ -0.78
SPT8YLR055C SWM2P40342 146 aa10.21□□□□□ -0.78
SPT8YLR055C MAL11P53048 616 aa10.21□□□□□ -0.78
SPT8YLR055C HOS2P53096 452 aaPredicted RBP10.21□□□□□ -0.78
SPT8YLR055C ERG26P53199 349 aaKnown RBP10.21□□□□□ -0.78
SPT8YLR055C INN1P53901 409 aa10.21□□□□□ -0.78
SPT8YLR055C YMR252CQ04814 134 aa10.21□□□□□ -0.78
SPT8YLR055C YMR315WQ04869 349 aaKnown RBP10.21□□□□□ -0.78
SPT8YLR055C BNA5Q05979 453 aa10.21□□□□□ -0.78
SPT8YLR055C REX4Q08237 289 aa10.21□□□□□ -0.78
SPT8YLR055C YOS9Q99220 542 aa10.21□□□□□ -0.78
SPT8YLR055C QCR7P00128 127 aa10.2□□□□□ -0.78
SPT8YLR055C CDC23P16522 626 aa10.2□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms