RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W SEC17P32602 292 aa4.54□□□□□ -1.68
LDB18YLL049W RPT5P33297 434 aaKnown RBP4.54□□□□□ -1.68
LDB18YLL049W CAF4P36130 643 aa4.54□□□□□ -1.68
LDB18YLL049W AIM3P38266 947 aaKnown RBP4.54□□□□□ -1.68
LDB18YLL049W MTC4P38335 694 aaKnown RBP4.54□□□□□ -1.68
LDB18YLL049W ADO1P47143 340 aaKnown RBP4.54□□□□□ -1.68
LDB18YLL049W SIP18P50263 79 aa4.54□□□□□ -1.68
LDB18YLL049W CRZ1P53968 678 aa4.54□□□□□ -1.68
LDB18YLL049W RPL6AQ02326 176 aaKnown RBP4.54□□□□□ -1.68
LDB18YLL049W KAP120Q02932 1032 aa4.54□□□□□ -1.68
LDB18YLL049W RIM9Q04734 239 aa4.54□□□□□ -1.68
LDB18YLL049W SNA4Q07549 140 aa4.54□□□□□ -1.68
LDB18YLL049W ATP2P00830 511 aaKnown RBP4.53□□□□□ -1.68
LDB18YLL049W ILV2P07342 687 aaKnown RBP4.53□□□□□ -1.68
LDB18YLL049W CLB2P24869 491 aa4.53□□□□□ -1.68
LDB18YLL049W RPS5P26783 225 aaKnown RBP4.53□□□□□ -1.68
LDB18YLL049W MNS1P32906 549 aa4.53□□□□□ -1.68
LDB18YLL049W SOF1P33750 489 aaKnown RBP4.53□□□□□ -1.68
LDB18YLL049W CHK1P38147 527 aa4.53□□□□□ -1.68
LDB18YLL049W ICS2P38284 255 aa4.53□□□□□ -1.68
LDB18YLL049W POP1P41812 875 aa4.53□□□□□ -1.68
LDB18YLL049W SSY5P47002 699 aa4.53□□□□□ -1.68
LDB18YLL049W PAC10P48363 199 aa4.53□□□□□ -1.68
LDB18YLL049W YGR126WP53274 230 aa4.53□□□□□ -1.68
LDB18YLL049W NOP19P53317 196 aaPredicted RBP4.53□□□□□ -1.68
LDB18YLL049W RCF2P53721 224 aa4.53□□□□□ -1.68
LDB18YLL049W DBP6P53734 629 aaKnown RBP4.53□□□□□ -1.68
LDB18YLL049W RCE1Q03530 315 aa4.53□□□□□ -1.68
LDB18YLL049W SSY1Q03770 852 aa4.53□□□□□ -1.68
LDB18YLL049W YAP6Q03935 383 aa4.53□□□□□ -1.68
LDB18YLL049W RAD30Q04049 632 aa4.53□□□□□ -1.68
LDB18YLL049W URC2Q04411 772 aa4.53□□□□□ -1.68
LDB18YLL049W HLR1Q04429 423 aa4.53□□□□□ -1.68
LDB18YLL049W CRT10Q08226 957 aa4.53□□□□□ -1.68
LDB18YLL049W ENB1Q08299 606 aa4.53□□□□□ -1.68
LDB18YLL049W YAL064W-BO13512 126 aa4.52□□□□□ -1.69
LDB18YLL049W ADH4P10127 382 aa4.52□□□□□ -1.69
LDB18YLL049W VMA11P32842 164 aa4.52□□□□□ -1.69
LDB18YLL049W SWH1P35845 1188 aa4.52□□□□□ -1.69
LDB18YLL049W COS9P36034 407 aa4.52□□□□□ -1.69
LDB18YLL049W CTF8P38877 133 aa4.52□□□□□ -1.69
LDB18YLL049W YER084WP40057 128 aa4.52□□□□□ -1.69
LDB18YLL049W SDP1P40479 209 aa4.52□□□□□ -1.69
LDB18YLL049W YIP4P53093 235 aa4.52□□□□□ -1.69
LDB18YLL049W MRP51Q02950 344 aa4.52□□□□□ -1.69
LDB18YLL049W NAT4Q04751 285 aa4.52□□□□□ -1.69
LDB18YLL049W UTP21Q06078 939 aaPredicted RBP4.52□□□□□ -1.69
LDB18YLL049W NGL1Q08213 363 aaKnown RBP4.52□□□□□ -1.69
LDB18YLL049W TRP3P00937 484 aa4.51□□□□□ -1.69
LDB18YLL049W MSI1P13712 422 aa4.51□□□□□ -1.69
LDB18YLL049W UGA1P17649 471 aa4.51□□□□□ -1.69
LDB18YLL049W DBR1P24309 405 aaKnown RBP4.51□□□□□ -1.69
LDB18YLL049W COQ2P32378 372 aa4.51□□□□□ -1.69
LDB18YLL049W SDS22P36047 338 aa4.51□□□□□ -1.69
LDB18YLL049W LAS1P36146 502 aaPredicted RBP4.51□□□□□ -1.69
LDB18YLL049W YHR180WP38868 163 aa4.51□□□□□ -1.69
LDB18YLL049W COG3P40094 801 aa4.51□□□□□ -1.69
LDB18YLL049W IRC5P43610 853 aa4.51□□□□□ -1.69
LDB18YLL049W MTR3P48240 250 aaPredicted RBP4.51□□□□□ -1.69
LDB18YLL049W PUS4P48567 403 aaKnown RBP4.51□□□□□ -1.69
LDB18YLL049W MTM1P53320 366 aa4.51□□□□□ -1.69
LDB18YLL049W DCP2P53550 970 aaKnown RBP4.51□□□□□ -1.69
LDB18YLL049W RSN1Q03516 953 aa4.51□□□□□ -1.69
LDB18YLL049W GAT3Q07928 141 aa4.51□□□□□ -1.69
LDB18YLL049W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
LDB18YLL049W YLR053CQ12026 108 aa4.51□□□□□ -1.69
LDB18YLL049W YDR215CQ12240 137 aa4.51□□□□□ -1.69
LDB18YLL049W JLP1Q12358 412 aa4.51□□□□□ -1.69
LDB18YLL049W MHF1Q3E835 90 aa4.51□□□□□ -1.69
LDB18YLL049W RPL35AP0CX84 120 aaKnown RBP4.5□□□□□ -1.69
LDB18YLL049W RPL35BP0CX85 120 aaKnown RBP4.5□□□□□ -1.69
LDB18YLL049W MRP13P12686 339 aa4.5□□□□□ -1.69
LDB18YLL049W UNG1P12887 359 aa4.5□□□□□ -1.69
LDB18YLL049W RPO26P20435 155 aa4.5□□□□□ -1.69
LDB18YLL049W RAD14P28519 371 aa4.5□□□□□ -1.69
LDB18YLL049W DGR2P32330 852 aa4.5□□□□□ -1.69
LDB18YLL049W OLA1P38219 394 aaKnown RBP4.5□□□□□ -1.69
LDB18YLL049W LNP1P38878 278 aa4.5□□□□□ -1.69
LDB18YLL049W GTR1Q00582 310 aa4.5□□□□□ -1.69
LDB18YLL049W CTL1Q03220 320 aaKnown RBP4.5□□□□□ -1.69
LDB18YLL049W YDR476CQ03362 224 aa4.5□□□□□ -1.69
LDB18YLL049W CSI2Q08054 341 aa4.5□□□□□ -1.69
LDB18YLL049W YOL131WQ08270 108 aa4.5□□□□□ -1.69
LDB18YLL049W SLF1Q12034 447 aaKnown RBP4.5□□□□□ -1.69
LDB18YLL049W MCM10P32354 571 aa4.49□□□□□ -1.69
LDB18YLL049W HCS1P34243 683 aa4.49□□□□□ -1.69
LDB18YLL049W FRE2P36033 711 aa4.49□□□□□ -1.69
LDB18YLL049W SHM2P37291 469 aaKnown RBP4.49□□□□□ -1.69
LDB18YLL049W RRP4P38792 359 aaKnown RBP4.49□□□□□ -1.69
LDB18YLL049W PIG2P40187 538 aa4.49□□□□□ -1.69
LDB18YLL049W SMX2P40204 77 aaKnown RBP4.49□□□□□ -1.69
LDB18YLL049W HXT9P40885 567 aa4.49□□□□□ -1.69
LDB18YLL049W GLR1P41921 483 aaKnown RBP4.49□□□□□ -1.69
LDB18YLL049W EXG2P52911 562 aa4.49□□□□□ -1.69
LDB18YLL049W IMA1P53051 589 aa4.49□□□□□ -1.69
LDB18YLL049W HXT11P54862 567 aa4.49□□□□□ -1.69
LDB18YLL049W SCS7Q03529 384 aa4.49□□□□□ -1.69
LDB18YLL049W FMN1Q03778 218 aa4.49□□□□□ -1.69
LDB18YLL049W YMR317WQ04893 1140 aa4.49□□□□□ -1.69
LDB18YLL049W YPR147CQ06522 304 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms