RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C TIR3P40552 269 aa11.15□□□□□ -0.62
SDH1YKL148C RPL10P41805 221 aaKnown RBP11.15□□□□□ -0.62
SDH1YKL148C AIM25P47140 327 aa11.15□□□□□ -0.62
SDH1YKL148C GNP1P48813 663 aa11.15□□□□□ -0.62
SDH1YKL148C DOC1P53068 250 aa11.15□□□□□ -0.62
SDH1YKL148C CWC25P53854 179 aaKnown RBP11.15□□□□□ -0.62
SDH1YKL148C YOL036WQ08206 761 aa11.15□□□□□ -0.62
SDH1YKL148C FEX1Q08913 375 aa11.15□□□□□ -0.62
SDH1YKL148C YDL211CQ12121 372 aa11.15□□□□□ -0.62
SDH1YKL148C DSF1P0CX08 502 aa11.15□□□□□ -0.62
SDH1YKL148C YNR073CP0CX09 502 aa11.15□□□□□ -0.62
SDH1YKL148C NHP6BP11633 99 aaKnown RBP11.15□□□□□ -0.62
SDH1YKL148C SSK1Q07084 712 aa11.15□□□□□ -0.62
SDH1YKL148C OPI10Q08202 246 aa11.15□□□□□ -0.62
SDH1YKL148C YGL194C-AQ2V2P6 80 aa11.15□□□□□ -0.62
SDH1YKL148C SCL1P21243 252 aaKnown RBP11.14□□□□□ -0.63
SDH1YKL148C HCM1P25364 564 aa11.14□□□□□ -0.63
SDH1YKL148C ITR1P30605 584 aa11.14□□□□□ -0.63
SDH1YKL148C MSS1P32559 526 aaPredicted RBP11.14□□□□□ -0.63
SDH1YKL148C YEF1P32622 495 aa11.14□□□□□ -0.63
SDH1YKL148C MTH1P35198 433 aa11.14□□□□□ -0.63
SDH1YKL148C HXT5P38695 592 aa11.14□□□□□ -0.63
SDH1YKL148C MDE1P47095 244 aa11.14□□□□□ -0.63
SDH1YKL148C JAC1P53193 184 aa11.14□□□□□ -0.63
SDH1YKL148C YML096WQ04489 525 aa11.14□□□□□ -0.63
SDH1YKL148C YCP4P25349 247 aaKnown RBP11.13□□□□□ -0.63
SDH1YKL148C YCL002CP25565 263 aa11.13□□□□□ -0.63
SDH1YKL148C RFC4P40339 323 aaKnown RBP11.13□□□□□ -0.63
SDH1YKL148C IDS2P46958 469 aa11.13□□□□□ -0.63
SDH1YKL148C TDA7P53882 636 aaPredicted RBP11.13□□□□□ -0.63
SDH1YKL148C PRM15Q03262 622 aa11.13□□□□□ -0.63
SDH1YKL148C SPC19Q03954 165 aa11.13□□□□□ -0.63
SDH1YKL148C MGR1P25573 417 aa11.13□□□□□ -0.63
SDH1YKL148C YMC1P32331 307 aa11.13□□□□□ -0.63
SDH1YKL148C OAR1P35731 278 aa11.13□□□□□ -0.63
SDH1YKL148C NAB3P38996 802 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
SDH1YKL148C ICE2P40499 491 aa11.13□□□□□ -0.63
SDH1YKL148C REC102Q02721 264 aa11.13□□□□□ -0.63
SDH1YKL148C SEC13Q04491 297 aaKnown RBP11.13□□□□□ -0.63
SDH1YKL148C YDR344CQ05510 147 aa11.13□□□□□ -0.63
SDH1YKL148C ATP14Q12349 124 aa11.13□□□□□ -0.63
SDH1YKL148C MRP1P10662 321 aaKnown RBP11.12□□□□□ -0.63
SDH1YKL148C PDA1P16387 420 aaKnown RBP11.12□□□□□ -0.63
SDH1YKL148C CKS1P20486 150 aaKnown RBP11.12□□□□□ -0.63
SDH1YKL148C ACB1P31787 87 aa11.12□□□□□ -0.63
SDH1YKL148C PAU2P32612 120 aa11.12□□□□□ -0.63
SDH1YKL148C VPS17P32913 551 aa11.12□□□□□ -0.63
SDH1YKL148C PTI1P39927 425 aaPredicted RBP11.12□□□□□ -0.63
SDH1YKL148C PZF1P39933 429 aa11.12□□□□□ -0.63
SDH1YKL148C FMP52P40008 231 aa11.12□□□□□ -0.63
SDH1YKL148C BAP3P41815 604 aa11.12□□□□□ -0.63
SDH1YKL148C MTL1P53214 551 aa11.12□□□□□ -0.63
SDH1YKL148C POP6P53218 158 aa11.12□□□□□ -0.63
SDH1YKL148C YDL177CQ12257 170 aa11.12□□□□□ -0.63
SDH1YKL148C INP53Q12271 1107 aa11.12□□□□□ -0.63
SDH1YKL148C RDI1Q12434 202 aa11.12□□□□□ -0.63
SDH1YKL148C NAG1Q8TGN9 163 aa11.12□□□□□ -0.63
SDH1YKL148C BAR1P12630 587 aa11.11□□□□□ -0.63
SDH1YKL148C UTR1P21373 530 aa11.11□□□□□ -0.63
SDH1YKL148C BOS1P25385 244 aa11.11□□□□□ -0.63
SDH1YKL148C BUB3P26449 341 aa11.11□□□□□ -0.63
SDH1YKL148C RRP3P38712 501 aaKnown RBP11.11□□□□□ -0.63
SDH1YKL148C GEP4P38812 185 aa11.11□□□□□ -0.63
SDH1YKL148C HRB1P38922 454 aaKnown RBP RIP-Chip data11.11□□□□□ -0.63not detected
SDH1YKL148C HAM1P47119 197 aaKnown RBP11.11□□□□□ -0.63
SDH1YKL148C GPG1P53130 126 aa11.11□□□□□ -0.63
SDH1YKL148C MMP1Q12372 583 aa11.11□□□□□ -0.63
SDH1YKL148C SOD2P00447 233 aa11.11□□□□□ -0.63
SDH1YKL148C HAP4P14064 554 aa11.11□□□□□ -0.63
SDH1YKL148C CDC23P16522 626 aa11.11□□□□□ -0.63
SDH1YKL148C PRP2P20095 876 aaPredicted RBP11.11□□□□□ -0.63
SDH1YKL148C PUT3P25502 979 aaPredicted RBP11.11□□□□□ -0.63
SDH1YKL148C AUR1P36107 401 aaPredicted RBP11.11□□□□□ -0.63
SDH1YKL148C QDR1P40475 563 aa11.11□□□□□ -0.63
SDH1YKL148C CAT5P41735 233 aa11.11□□□□□ -0.63
SDH1YKL148C PMT6P42934 759 aa11.11□□□□□ -0.63
SDH1YKL148C UBC12P52491 188 aa11.11□□□□□ -0.63
SDH1YKL148C YGR250CP53316 781 aaKnown RBP11.11□□□□□ -0.63
SDH1YKL148C DML1Q03652 475 aa11.11□□□□□ -0.63
SDH1YKL148C MMT2Q08970 484 aa11.11□□□□□ -0.63
SDH1YKL148C PSF1Q12488 208 aa11.11□□□□□ -0.63
SDH1YKL148C DET1Q99288 334 aaKnown RBP11.11□□□□□ -0.63
SDH1YKL148C AAC3P18238 307 aa11.1□□□□□ -0.63
SDH1YKL148C FUR1P18562 216 aaKnown RBP11.1□□□□□ -0.63
SDH1YKL148C SAM37P50110 327 aa11.1□□□□□ -0.63
SDH1YKL148C VBA1Q04301 562 aa11.1□□□□□ -0.63
SDH1YKL148C RBS1Q05672 457 aaKnown RBP11.1□□□□□ -0.63
SDH1YKL148C UTP21Q06078 939 aaPredicted RBP11.1□□□□□ -0.63
SDH1YKL148C SYC1Q08553 188 aaPredicted RBP11.1□□□□□ -0.63
SDH1YKL148C FEX2Q08991 375 aa11.1□□□□□ -0.63
SDH1YKL148C YBR085C-AO43137 85 aa11.09□□□□□ -0.63
SDH1YKL148C ATS1P31386 333 aa11.09□□□□□ -0.63
SDH1YKL148C FHN1P53279 174 aa11.09□□□□□ -0.63
SDH1YKL148C HXT11P54862 567 aa11.09□□□□□ -0.63
SDH1YKL148C YPR109WQ06104 294 aa11.09□□□□□ -0.63
SDH1YKL148C KEI1Q06346 221 aa11.09□□□□□ -0.63
SDH1YKL148C MPD2Q99316 277 aa11.09□□□□□ -0.63
SDH1YKL148C SRB5P32585 307 aa11.09□□□□□ -0.63
SDH1YKL148C SFA1P32771 386 aa11.09□□□□□ -0.63
SDH1YKL148C WBP1P33767 430 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms