RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W MRP13P12686 339 aa5.52□□□□□ -1.53
PRE3YJL001W UNG1P12887 359 aa5.52□□□□□ -1.53
PRE3YJL001W ECM10P39987 644 aa5.52□□□□□ -1.53
PRE3YJL001W YNL208WP40159 199 aaKnown RBP5.52□□□□□ -1.53
PRE3YJL001W AYR1P40471 297 aa5.52□□□□□ -1.53
PRE3YJL001W YFL051CP43552 160 aa5.52□□□□□ -1.53
PRE3YJL001W AAD10P47182 288 aa5.52□□□□□ -1.53
PRE3YJL001W YNR068CP53754 272 aa5.52□□□□□ -1.53
PRE3YJL001W GTR1Q00582 310 aa5.52□□□□□ -1.53
PRE3YJL001W YLR036CQ07986 203 aa5.52□□□□□ -1.53
PRE3YJL001W UAF30Q08747 228 aa5.52□□□□□ -1.53
PRE3YJL001W YKL018C-AQ3E7A7 99 aa5.52□□□□□ -1.53
PRE3YJL001W GAL3P13045 520 aa5.51□□□□□ -1.53
PRE3YJL001W KSS1P14681 368 aa5.51□□□□□ -1.53
PRE3YJL001W DMC1P25453 334 aa5.51□□□□□ -1.53
PRE3YJL001W YCL049CP25577 312 aa5.51□□□□□ -1.53
PRE3YJL001W YBR032WP38223 100 aa5.51□□□□□ -1.53
PRE3YJL001W ARN2P38724 620 aa5.51□□□□□ -1.53
PRE3YJL001W PUG1P40100 303 aa5.51□□□□□ -1.53
PRE3YJL001W YJL068CP40363 299 aa5.51□□□□□ -1.53
PRE3YJL001W YFR054CP43622 192 aa5.51□□□□□ -1.53
PRE3YJL001W YGR054WP53235 642 aaKnown RBP5.51□□□□□ -1.53
PRE3YJL001W YAP1802P53309 568 aa5.51□□□□□ -1.53
PRE3YJL001W OGG1P53397 376 aaPredicted RBP5.51□□□□□ -1.53
PRE3YJL001W TIM10P87108 93 aa5.51□□□□□ -1.53
PRE3YJL001W YEH2Q07950 538 aa5.51□□□□□ -1.53
PRE3YJL001W PFK27Q12471 397 aaPredicted RBP5.51□□□□□ -1.53
PRE3YJL001W CBS1P14066 229 aa5.5□□□□□ -1.53
PRE3YJL001W MDH2P22133 377 aa5.5□□□□□ -1.53
PRE3YJL001W CLB4P24871 460 aa5.5□□□□□ -1.53
PRE3YJL001W CTR86P25355 563 aa5.5□□□□□ -1.53
PRE3YJL001W MSS1P32559 526 aaPredicted RBP5.5□□□□□ -1.53
PRE3YJL001W RPT5P33297 434 aaKnown RBP5.5□□□□□ -1.53
PRE3YJL001W YKL187CP34231 750 aa5.5□□□□□ -1.53
PRE3YJL001W PTC1P35182 281 aa5.5□□□□□ -1.53
PRE3YJL001W FRE2P36033 711 aa5.5□□□□□ -1.53
PRE3YJL001W YBL029WP38201 376 aa5.5□□□□□ -1.53
PRE3YJL001W YJL193WP39542 402 aa5.5□□□□□ -1.53
PRE3YJL001W AVT7P40501 490 aa5.5□□□□□ -1.53
PRE3YJL001W SMK1P41808 388 aa5.5□□□□□ -1.53
PRE3YJL001W PAC10P48363 199 aa5.5□□□□□ -1.53
PRE3YJL001W MSY1P48527 492 aa5.5□□□□□ -1.53
PRE3YJL001W LSG1P53145 640 aaKnown RBP5.5□□□□□ -1.53
PRE3YJL001W ARC35P53731 342 aaKnown RBP5.5□□□□□ -1.53
PRE3YJL001W YNL010WP53981 241 aaKnown RBP5.5□□□□□ -1.53
PRE3YJL001W MRPL13Q02204 264 aa5.5□□□□□ -1.53
PRE3YJL001W STE23Q06010 1027 aa5.5□□□□□ -1.53
PRE3YJL001W YLR413WQ06689 675 aa5.5□□□□□ -1.53
PRE3YJL001W RAF1Q06891 181 aa5.5□□□□□ -1.53
PRE3YJL001W IZH3Q07959 543 aa5.5□□□□□ -1.53
PRE3YJL001W TMC1Q08422 150 aaPredicted RBP5.5□□□□□ -1.53
PRE3YJL001W RAP1P11938 827 aa5.49□□□□□ -1.53
PRE3YJL001W PDX1P16451 410 aa5.49□□□□□ -1.53
PRE3YJL001W THR1P17423 357 aaKnown RBP5.49□□□□□ -1.53
PRE3YJL001W RVS161P25343 265 aaKnown RBP5.49□□□□□ -1.53
PRE3YJL001W MRPL39P36533 70 aa5.49□□□□□ -1.53
PRE3YJL001W MTC6P38849 526 aa5.49□□□□□ -1.53
PRE3YJL001W RIM13Q03792 727 aa5.49□□□□□ -1.53
PRE3YJL001W ARR1Q06596 294 aa5.49□□□□□ -1.53
PRE3YJL001W SNF8Q12483 233 aa5.49□□□□□ -1.53
PRE3YJL001W DET1Q99288 334 aaKnown RBP5.49□□□□□ -1.53
PRE3YJL001W SAS5Q99314 248 aa5.49□□□□□ -1.53
PRE3YJL001W UTR1P21373 530 aa5.48□□□□□ -1.53
PRE3YJL001W YCK1P23291 538 aa5.48□□□□□ -1.53
PRE3YJL001W SCO1P23833 295 aa5.48□□□□□ -1.53
PRE3YJL001W GFD2P25370 566 aaKnown RBP5.48□□□□□ -1.53
PRE3YJL001W EHD3P28817 500 aa5.48□□□□□ -1.53
PRE3YJL001W MRPS5P33759 307 aa5.48□□□□□ -1.53
PRE3YJL001W PRS3P38689 320 aaKnown RBP5.48□□□□□ -1.53
PRE3YJL001W VPS41P38959 992 aa5.48□□□□□ -1.53
PRE3YJL001W SHO1P40073 367 aa5.48□□□□□ -1.53
PRE3YJL001W GAB1P41733 394 aa5.48□□□□□ -1.53
PRE3YJL001W CUS2P53830 285 aaPredicted RBP5.48□□□□□ -1.53
PRE3YJL001W REX2P54964 269 aaKnown RBP5.48□□□□□ -1.53
PRE3YJL001W EKI1Q03764 534 aa5.48□□□□□ -1.53
PRE3YJL001W RAD30Q04049 632 aa5.48□□□□□ -1.53
PRE3YJL001W SNX41Q04053 625 aa5.48□□□□□ -1.53
PRE3YJL001W NAT4Q04751 285 aa5.48□□□□□ -1.53
PRE3YJL001W FAR8Q05040 523 aa5.48□□□□□ -1.53
PRE3YJL001W YHC1Q05900 231 aaKnown RBP5.48□□□□□ -1.53
PRE3YJL001W ARR3Q06598 404 aa5.48□□□□□ -1.53
PRE3YJL001W YDL086WQ07505 273 aa5.48□□□□□ -1.53
PRE3YJL001W PML1Q07930 204 aaPredicted RBP5.48□□□□□ -1.53
PRE3YJL001W YOL131WQ08270 108 aa5.48□□□□□ -1.53
PRE3YJL001W HNT3Q08702 217 aa5.48□□□□□ -1.53
PRE3YJL001W GRE1Q08969 168 aa5.48□□□□□ -1.53
PRE3YJL001W USV1Q12132 391 aa5.48□□□□□ -1.53
PRE3YJL001W NOT5Q12514 560 aaPredicted RBP5.48□□□□□ -1.53
PRE3YJL001W ARG81P05085 880 aa5.47□□□□□ -1.53
PRE3YJL001W PRB1P09232 635 aa5.47□□□□□ -1.53
PRE3YJL001W ZWF1P11412 505 aaKnown RBP5.47□□□□□ -1.53
PRE3YJL001W RNA1P11745 407 aaKnown RBP5.47□□□□□ -1.53
PRE3YJL001W NUP2P32499 720 aa5.47□□□□□ -1.53
PRE3YJL001W SSE1P32589 693 aaKnown RBP5.47□□□□□ -1.53
PRE3YJL001W ARN1P38731 627 aa5.47□□□□□ -1.53
PRE3YJL001W YIL012WP40551 113 aa5.47□□□□□ -1.53
PRE3YJL001W TOM22P49334 152 aa5.47□□□□□ -1.53
PRE3YJL001W YGR151CP53287 111 aa5.47□□□□□ -1.53
PRE3YJL001W YPL039WQ03080 316 aa5.47□□□□□ -1.53
PRE3YJL001W YDR476CQ03362 224 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms