RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W CAF4P36130 643 aa4.02□□□□□ -1.77
PRE9YGR135W MRPL4P36517 319 aa4.02□□□□□ -1.77
PRE9YGR135W LEU5P38702 357 aa4.02□□□□□ -1.77
PRE9YGR135W GRE3P38715 327 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
PRE9YGR135W ERV46P39727 415 aa4.02□□□□□ -1.77
PRE9YGR135W PHM8P40025 321 aa4.02□□□□□ -1.77
PRE9YGR135W PCL6P40038 420 aa4.02□□□□□ -1.77
PRE9YGR135W BUD13P46947 266 aaPredicted RBP4.02□□□□□ -1.77
PRE9YGR135W NAS6P50086 228 aa4.02□□□□□ -1.77
PRE9YGR135W YPT32P51996 222 aaKnown RBP4.02□□□□□ -1.77
PRE9YGR135W ENT5Q03769 411 aaKnown RBP4.02□□□□□ -1.77
PRE9YGR135W SEG1Q04279 960 aa4.02□□□□□ -1.77
PRE9YGR135W TMN2Q04562 672 aa4.02□□□□□ -1.77
PRE9YGR135W PHO92Q06390 306 aa4.02□□□□□ -1.77
PRE9YGR135W PEX27Q08580 376 aa4.02□□□□□ -1.77
PRE9YGR135W LEA1Q08963 238 aaPredicted RBP4.02□□□□□ -1.77
PRE9YGR135W RMD5Q12508 421 aa4.02□□□□□ -1.77
PRE9YGR135W MHF2Q3E829 80 aa4.02□□□□□ -1.77
PRE9YGR135W TKL1P23254 680 aaKnown RBP4.01□□□□□ -1.77
PRE9YGR135W HXT2P23585 541 aa4.01□□□□□ -1.77
PRE9YGR135W BEM1P29366 551 aa4.01□□□□□ -1.77
PRE9YGR135W UTR4P32626 227 aa4.01□□□□□ -1.77
PRE9YGR135W COX13P32799 129 aa4.01□□□□□ -1.77
PRE9YGR135W ECM31P38122 312 aa4.01□□□□□ -1.77
PRE9YGR135W MRP21P38175 177 aa4.01□□□□□ -1.77
PRE9YGR135W YBR137WP38276 179 aa4.01□□□□□ -1.77
PRE9YGR135W ANS1P38832 159 aa4.01□□□□□ -1.77
PRE9YGR135W EXO1P39875 702 aa4.01□□□□□ -1.77
PRE9YGR135W RGI1P40043 161 aaPredicted RBP4.01□□□□□ -1.77
PRE9YGR135W COG3P40094 801 aa4.01□□□□□ -1.77
PRE9YGR135W SOK1P40317 901 aa4.01□□□□□ -1.77
PRE9YGR135W OPT1P40897 799 aa4.01□□□□□ -1.77
PRE9YGR135W QRI1P43123 477 aaKnown RBP4.01□□□□□ -1.77
PRE9YGR135W GCD14P46959 383 aaPredicted RBP4.01□□□□□ -1.77
PRE9YGR135W TPN1P53099 579 aa4.01□□□□□ -1.77
PRE9YGR135W ERG26P53199 349 aaKnown RBP4.01□□□□□ -1.77
PRE9YGR135W PEX31P53203 462 aa4.01□□□□□ -1.77
PRE9YGR135W YNL181WP53878 407 aa4.01□□□□□ -1.77
PRE9YGR135W IBD2P53892 351 aa4.01□□□□□ -1.77
PRE9YGR135W RLI1Q03195 608 aaKnown RBP4.01□□□□□ -1.77
PRE9YGR135W YMR206WQ03695 313 aa4.01□□□□□ -1.77
PRE9YGR135W RNH1Q04740 348 aa4.01□□□□□ -1.77
PRE9YGR135W RIF2Q06208 395 aa4.01□□□□□ -1.77
PRE9YGR135W CDD1Q06549 142 aa4.01□□□□□ -1.77
PRE9YGR135W GPM2Q12008 311 aa4.01□□□□□ -1.77
PRE9YGR135W RPN6Q12377 434 aa4.01□□□□□ -1.77
PRE9YGR135W ERP3Q12403 225 aa4.01□□□□□ -1.77
PRE9YGR135W HEM2P05373 342 aa4□□□□□ -1.77
PRE9YGR135W PET494P07390 489 aaPredicted RBP4□□□□□ -1.77
PRE9YGR135W MRP2P10663 115 aaPredicted RBP4□□□□□ -1.77
PRE9YGR135W RPB4P20433 221 aaPredicted RBP4□□□□□ -1.77
PRE9YGR135W DBP3P20447 523 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W SGV1P23293 657 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W AAT2P23542 418 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W ELO2P25358 347 aa4□□□□□ -1.77
PRE9YGR135W PEX34P25584 144 aa4□□□□□ -1.77
PRE9YGR135W VPS17P32913 551 aa4□□□□□ -1.77
PRE9YGR135W SDH3P33421 198 aa4□□□□□ -1.77
PRE9YGR135W SKT5P34226 696 aa4□□□□□ -1.77
PRE9YGR135W ZTA1P38230 334 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W MBA1P38300 278 aa4□□□□□ -1.77
PRE9YGR135W RRP4P38792 359 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W MLH1P38920 769 aa4□□□□□ -1.77
PRE9YGR135W HAT2P39984 401 aa4□□□□□ -1.77
PRE9YGR135W YEL028WP39989 153 aa4□□□□□ -1.77
PRE9YGR135W YER034WP40022 185 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W PRE6P40303 254 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W ALK1P43633 760 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W RPS10BP46784 105 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W APS3P47064 194 aa4□□□□□ -1.77
PRE9YGR135W BOL2P53082 120 aa4□□□□□ -1.77
PRE9YGR135W EFM5P53200 248 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W NOP13P53883 403 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
PRE9YGR135W YNL143CP53908 130 aa4□□□□□ -1.77
PRE9YGR135W KTR6P54070 446 aa4□□□□□ -1.77
PRE9YGR135W SMX3P54999 86 aaPredicted RBP4□□□□□ -1.77
PRE9YGR135W RSM23Q01163 450 aa4□□□□□ -1.77
PRE9YGR135W TAF12Q03761 539 aa4□□□□□ -1.77
PRE9YGR135W EMI1Q04406 187 aa4□□□□□ -1.77
PRE9YGR135W MRPL1Q04599 285 aa4□□□□□ -1.77
PRE9YGR135W YDR124WQ04608 324 aa4□□□□□ -1.77
PRE9YGR135W HRD3Q05787 833 aa4□□□□□ -1.77
PRE9YGR135W YHC1Q05900 231 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W RPS10AQ08745 105 aaPredicted RBP4□□□□□ -1.77
PRE9YGR135W MDM32Q12171 622 aa4□□□□□ -1.77
PRE9YGR135W VAM3Q12241 283 aa4□□□□□ -1.77
PRE9YGR135W YLR126CQ12288 251 aa4□□□□□ -1.77
PRE9YGR135W ATP14Q12349 124 aa4□□□□□ -1.77
PRE9YGR135W LSO2Q3E772 92 aaKnown RBP4□□□□□ -1.77
PRE9YGR135W YHR213W-AQ8TGT4 77 aa4□□□□□ -1.77
PRE9YGR135W MTR10Q99189 972 aa4□□□□□ -1.77
PRE9YGR135W COX5AP00424 153 aa3.99□□□□□ -1.77
PRE9YGR135W IPP1P00817 287 aaKnown RBP3.99□□□□□ -1.77
PRE9YGR135W GAL7P08431 366 aa3.99□□□□□ -1.77
PRE9YGR135W DSF1P0CX08 502 aa3.99□□□□□ -1.77
PRE9YGR135W YNR073CP0CX09 502 aa3.99□□□□□ -1.77
PRE9YGR135W MAS1P10507 462 aa3.99□□□□□ -1.77
PRE9YGR135W BUD5P25300 642 aaPredicted RBP3.99□□□□□ -1.77
PRE9YGR135W JEN1P36035 616 aa3.99□□□□□ -1.77
PRE9YGR135W ANR2P36090 516 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms