RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W DLT1Q04216 342 aa3.26□□□□□ -1.89
CAF130YGR134W ECI1Q05871 280 aa3.26□□□□□ -1.89
CAF130YGR134W YLR346CQ06139 101 aa3.26□□□□□ -1.89
CAF130YGR134W GAT3Q07928 141 aa3.26□□□□□ -1.89
CAF130YGR134W DSE3Q08729 430 aa3.26□□□□□ -1.89
CAF130YGR134W YOR387CQ08910 206 aa3.26□□□□□ -1.89
CAF130YGR134W YDL109CQ12103 647 aa3.26□□□□□ -1.89
CAF130YGR134W APC9Q12107 265 aa3.26□□□□□ -1.89
CAF130YGR134W UTP10P42945 1769 aaKnown RBP3.26□□□□□ -1.89
CAF130YGR134W HEM2P05373 342 aa3.25□□□□□ -1.89
CAF130YGR134W NHP6BP11633 99 aaKnown RBP3.25□□□□□ -1.89
CAF130YGR134W MYO3P36006 1272 aa3.25□□□□□ -1.89
CAF130YGR134W BMT2P38278 337 aa3.25□□□□□ -1.89
CAF130YGR134W IKI1P38874 309 aa3.25□□□□□ -1.89
CAF130YGR134W DHH1P39517 506 aaKnown RBP3.25□□□□□ -1.89
CAF130YGR134W GDS1P41913 522 aa3.25□□□□□ -1.89
CAF130YGR134W GND2P53319 492 aa3.25□□□□□ -1.89
CAF130YGR134W ALG11P53954 548 aaKnown RBP3.25□□□□□ -1.89
CAF130YGR134W YVH1Q02256 364 aaKnown RBP3.25□□□□□ -1.89
CAF130YGR134W EMI2Q04409 500 aaKnown RBP3.25□□□□□ -1.89
CAF130YGR134W GFD1Q04839 188 aaKnown RBP3.25□□□□□ -1.89
CAF130YGR134W PDE2P06776 526 aa3.25□□□□□ -1.89
CAF130YGR134W YAK1P14680 807 aa3.25□□□□□ -1.89
CAF130YGR134W BUB3P26449 341 aa3.25□□□□□ -1.89
CAF130YGR134W HOM6P31116 359 aaKnown RBP3.25□□□□□ -1.89
CAF130YGR134W SGE1P33335 543 aa3.25□□□□□ -1.89
CAF130YGR134W NUF2P33895 451 aa3.25□□□□□ -1.89
CAF130YGR134W YKR041WP36134 250 aa3.25□□□□□ -1.89
CAF130YGR134W PRS2P38620 318 aaKnown RBP3.25□□□□□ -1.89
CAF130YGR134W PXR1P53335 271 aaPredicted RBP3.25□□□□□ -1.89
CAF130YGR134W NUP100Q02629 959 aa3.25□□□□□ -1.89
CAF130YGR134W DXO1Q06349 442 aa3.25□□□□□ -1.89
CAF130YGR134W SLM3Q12093 417 aa3.25□□□□□ -1.89
CAF130YGR134W TMS1Q12116 473 aa3.25□□□□□ -1.89
CAF130YGR134W GAL4P04386 881 aa3.25□□□□□ -1.89
CAF130YGR134W DAL82P21705 255 aa3.25□□□□□ -1.89
CAF130YGR134W YIL001WP40560 513 aa3.25□□□□□ -1.89
CAF130YGR134W PRY1P47032 299 aa3.25□□□□□ -1.89
CAF130YGR134W YJR056CP47115 236 aa3.25□□□□□ -1.89
CAF130YGR134W YJR141WP47172 347 aaPredicted RBP3.25□□□□□ -1.89
CAF130YGR134W TOS8P53147 276 aa3.25□□□□□ -1.89
CAF130YGR134W GOR1P53839 350 aa3.25□□□□□ -1.89
CAF130YGR134W YDR387CQ04162 555 aa3.25□□□□□ -1.89
CAF130YGR134W SMP3Q04174 516 aa3.25□□□□□ -1.89
CAF130YGR134W TUS1Q06412 1307 aa3.24□□□□□ -1.89
CAF130YGR134W RPL31AP0C2H8 113 aaKnown RBP3.24□□□□□ -1.89
CAF130YGR134W ASP3-2P0CX77 362 aa3.24□□□□□ -1.89
CAF130YGR134W ASP3-3P0CX78 362 aa3.24□□□□□ -1.89
CAF130YGR134W ASP3-4P0CX79 362 aa3.24□□□□□ -1.89
CAF130YGR134W ASP3-1P0CZ17 362 aa3.24□□□□□ -1.89
CAF130YGR134W EXO70P19658 623 aa3.24□□□□□ -1.89
CAF130YGR134W ECM25P32525 599 aa3.24□□□□□ -1.89
CAF130YGR134W SKG6P32900 734 aaPredicted RBP3.24□□□□□ -1.89
CAF130YGR134W SKN1P33336 771 aa3.24□□□□□ -1.89
CAF130YGR134W LOS1P33418 1100 aaPredicted RBP3.24□□□□□ -1.89
CAF130YGR134W GPX2P38143 162 aa3.24□□□□□ -1.89
CAF130YGR134W DBP8P38719 431 aa3.24□□□□□ -1.89
CAF130YGR134W GAB1P41733 394 aa3.24□□□□□ -1.89
CAF130YGR134W PTR3P43606 678 aa3.24□□□□□ -1.89
CAF130YGR134W YNR066CP53752 436 aa3.24□□□□□ -1.89
CAF130YGR134W SMX3P54999 86 aaPredicted RBP3.24□□□□□ -1.89
CAF130YGR134W OST6Q03723 332 aa3.24□□□□□ -1.89
CAF130YGR134W NDE2Q07500 545 aa3.24□□□□□ -1.89
CAF130YGR134W YDL218WQ07629 317 aa3.24□□□□□ -1.89
CAF130YGR134W BTS1Q12051 335 aa3.24□□□□□ -1.89
CAF130YGR134W HIS4P00815 799 aaKnown RBP3.24□□□□□ -1.89
CAF130YGR134W RPS19AP07280 144 aaKnown RBP3.24□□□□□ -1.89
CAF130YGR134W RPS19BP07281 144 aaPredicted RBP3.24□□□□□ -1.89
CAF130YGR134W MET2P08465 486 aa3.24□□□□□ -1.89
CAF130YGR134W YLL053CP0CD98 152 aa3.24□□□□□ -1.89
CAF130YGR134W PHO80P20052 293 aa3.24□□□□□ -1.89
CAF130YGR134W RPL24BP24000 155 aaKnown RBP3.24□□□□□ -1.89
CAF130YGR134W TDA11P38854 504 aa3.24□□□□□ -1.89
CAF130YGR134W SEH1P53011 349 aaKnown RBP3.24□□□□□ -1.89
CAF130YGR134W ADH6Q04894 360 aaKnown RBP3.24□□□□□ -1.89
CAF130YGR134W YMR226CQ05016 267 aaKnown RBP3.24□□□□□ -1.89
CAF130YGR134W MRPL51Q06090 140 aaPredicted RBP3.24□□□□□ -1.89
CAF130YGR134W ARO10Q06408 635 aa3.24□□□□□ -1.89
CAF130YGR134W ATG17Q06410 417 aa3.24□□□□□ -1.89
CAF130YGR134W MCH4Q08268 501 aa3.24□□□□□ -1.89
CAF130YGR134W IZH4Q99393 312 aa3.24□□□□□ -1.89
CAF130YGR134W WHI2P12611 486 aa3.23□□□□□ -1.89
CAF130YGR134W CHA1P25379 360 aaKnown RBP3.23□□□□□ -1.89
CAF130YGR134W PPZ2P33329 710 aa3.23□□□□□ -1.89
CAF130YGR134W SPC34P36131 295 aa3.23□□□□□ -1.89
CAF130YGR134W SEC72P39742 193 aaKnown RBP3.23□□□□□ -1.89
CAF130YGR134W LAS21P40367 830 aa3.23□□□□□ -1.89
CAF130YGR134W YMR187CQ03236 431 aa3.23□□□□□ -1.89
CAF130YGR134W STE18P18852 110 aa3.23□□□□□ -1.89
CAF130YGR134W ERG9P29704 444 aa3.23□□□□□ -1.89
CAF130YGR134W SRY1P36007 326 aa3.23□□□□□ -1.89
CAF130YGR134W YBR241CP38142 488 aa3.23□□□□□ -1.89
CAF130YGR134W ECM8P38246 354 aa3.23□□□□□ -1.89
CAF130YGR134W PCF11P39081 626 aaPredicted RBP3.23□□□□□ -1.89
CAF130YGR134W YER079WP40052 210 aaKnown RBP3.23□□□□□ -1.89
CAF130YGR134W KEG1P43614 200 aa3.23□□□□□ -1.89
CAF130YGR134W YIF1P53845 314 aaKnown RBP3.23□□□□□ -1.89
CAF130YGR134W GIS1Q03833 894 aa3.23□□□□□ -1.89
CAF130YGR134W YLR012CQ07927 99 aa3.23□□□□□ -1.89
CAF130YGR134W RPN6Q12377 434 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms