RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	YNL092W	P53934	400 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	SNX41	Q04053	625 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	PLM2	Q04383	521 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	RNH202	Q05635	350 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	BRX1	Q08235	291 aa	Known RBP	4.55	□□□□□ -1.68
RPN12	YFR052W	SKI7	Q08491	747 aa	Predicted RBP	4.55	□□□□□ -1.68
RPN12	YFR052W	MRX4	Q12467	430 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	MTR10	Q99189	972 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	FLO9	P39712	1322 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	PHO2	P07269	559 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	SUI3	P09064	285 aa	Known RBP	4.54	□□□□□ -1.68
RPN12	YFR052W	RPL11A	P0C0W9	174 aa	Known RBP	4.54	□□□□□ -1.68
RPN12	YFR052W	YHR214C-D	P0CX93	97 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	YCR100C	P25606	316 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
RPN12	YFR052W	ERG9	P29704	444 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	ATS1	P31386	333 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	MDL1	P33310	695 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	SWH1	P35845	1188 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	LHS1	P36016	881 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	YBR241C	P38142	488 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	CCZ1	P38273	704 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	MTC4	P38335	694 aa	Known RBP	4.54	□□□□□ -1.68
RPN12	YFR052W	YHR180W	P38868	163 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	GPI16	P38875	610 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	RBG1	P39729	369 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	NUP57	P48837	541 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	RPN14	P53196	417 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	YGR066C	P53242	292 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	DSL1	P53847	754 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	RHO5	P53879	331 aa	Known RBP	4.54	□□□□□ -1.68
RPN12	YFR052W	SDC1	Q03323	175 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	RDR1	Q08904	546 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	YRA1	Q12159	226 aa	Known RBP	4.54	□□□□□ -1.68
RPN12	YFR052W	YOR214C	Q12282	236 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	SFM1	Q12314	213 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	SWM1	Q12379	170 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	RPL11B	Q3E757	174 aa	Predicted RBP	4.54	□□□□□ -1.68
RPN12	YFR052W	Q0144	Q9ZZW2	109 aa		4.54	□□□□□ -1.68
RPN12	YFR052W	YAK1	P14680	807 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	RHB1	P25378	209 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	UBC8	P28263	218 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	HIR2	P32480	875 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	LOT5	P34234	306 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	SPC34	P36131	295 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	RRP4	P38792	359 aa	Known RBP	4.53	□□□□□ -1.68
RPN12	YFR052W	SHO1	P40073	367 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	DIM1	P41819	318 aa	Known RBP	4.53	□□□□□ -1.68
RPN12	YFR052W	GCN20	P43535	752 aa	Known RBP	4.53	□□□□□ -1.68
RPN12	YFR052W	HSV2	P50079	448 aa	Predicted RBP	4.53	□□□□□ -1.68
RPN12	YFR052W	IMD4	P50094	524 aa	Known RBP	4.53	□□□□□ -1.68
RPN12	YFR052W	MPC1	P53157	130 aa	Known RBP	4.53	□□□□□ -1.68
RPN12	YFR052W	SLI1	P53304	468 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	URC2	Q04411	772 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	COX20	Q04935	205 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	BUR2	Q05949	395 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	GAS2	Q06135	555 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	DBP9	Q06218	594 aa	Known RBP	4.53	□□□□□ -1.68
RPN12	YFR052W	DTD1	Q07648	150 aa	Known RBP	4.53	□□□□□ -1.68
RPN12	YFR052W	CRT10	Q08226	957 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	ENB1	Q08299	606 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	BTS1	Q12051	335 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	YLR126C	Q12288	251 aa		4.53	□□□□□ -1.68
RPN12	YFR052W	RPC40	P07703	335 aa	Known RBP	4.52	□□□□□ -1.69
RPN12	YFR052W	YOL163W	P0CF20	169 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	STE12	P13574	688 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	YPK2	P18961	677 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	MDH2	P22133	377 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	HSP30	P25619	332 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	SBA1	P28707	216 aa	Known RBP	4.52	□□□□□ -1.69
RPN12	YFR052W	ITR2	P30606	609 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	SRO77	P38163	1010 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	HXT9	P40885	567 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	NIT2	P47016	307 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	BPL1	P48445	690 aa	Predicted RBP	4.52	□□□□□ -1.69
RPN12	YFR052W	ERP6	P53198	216 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	RBG2	P53295	368 aa	Known RBP	4.52	□□□□□ -1.69
RPN12	YFR052W	BSC5	P53755	489 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	ASI2	P53895	289 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	HXT11	P54862	567 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	YKR011C	Q02209	353 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	RRN5	Q02983	363 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	PLB2	Q03674	706 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	YDR249C	Q03787	373 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	FMP45	Q07651	309 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	MCP1	Q12106	302 aa		4.52	□□□□□ -1.69
RPN12	YFR052W	SNF4	P12904	322 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	MAK32	P23060	363 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	SCO1	P23833	295 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	TIM12	P32830	109 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	HCS1	P34243	683 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	YKL107W	P34251	309 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	YPT53	P36019	220 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	RCY1	P39531	840 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	YEL068C	P39977	110 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	IRC7	P43623	340 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	MNN5	P46982	586 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	SNF12	P53628	566 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	YSA1	Q01976	231 aa		4.51	□□□□□ -1.69
RPN12	YFR052W	HFD1	Q04458	532 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms