RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C SIP3P38717 1229 aa3.56□□□□□ -1.84
SPB4YFL002C DFG10P40526 253 aa3.56□□□□□ -1.84
SPB4YFL002C CIN2P46670 268 aa3.56□□□□□ -1.84
SPB4YFL002C COS10P52924 374 aa3.56□□□□□ -1.84
SPB4YFL002C HCH1P53834 153 aa3.56□□□□□ -1.84
SPB4YFL002C GIM3P53900 129 aa3.56□□□□□ -1.84
SPB4YFL002C YMR027WQ04371 470 aa3.56□□□□□ -1.84
SPB4YFL002C GTO3Q04806 366 aa3.56□□□□□ -1.84
SPB4YFL002C YLR012CQ07927 99 aa3.56□□□□□ -1.84
SPB4YFL002C SMC5Q08204 1093 aa3.56□□□□□ -1.84
SPB4YFL002C GIS3Q12418 502 aa3.56□□□□□ -1.84
SPB4YFL002C EAF3Q12432 401 aa3.56□□□□□ -1.84
SPB4YFL002C HTZ1Q12692 134 aaKnown RBP3.56□□□□□ -1.84
SPB4YFL002C IZH4Q99393 312 aa3.56□□□□□ -1.84
SPB4YFL002C RPL31AP0C2H8 113 aaKnown RBP3.55□□□□□ -1.84
SPB4YFL002C CPR1P14832 162 aaKnown RBP3.55□□□□□ -1.84
SPB4YFL002C MER1P16523 270 aa3.55□□□□□ -1.84
SPB4YFL002C YCR043CP25361 127 aa3.55□□□□□ -1.84
SPB4YFL002C RPL16AP26784 199 aaKnown RBP3.55□□□□□ -1.84
SPB4YFL002C NUP2P32499 720 aa3.55□□□□□ -1.84
SPB4YFL002C SPO23P33757 523 aa3.55□□□□□ -1.84
SPB4YFL002C CUE2P36075 443 aaKnown RBP3.55□□□□□ -1.84
SPB4YFL002C ECM8P38246 354 aa3.55□□□□□ -1.84
SPB4YFL002C YNL320WP42840 284 aa3.55□□□□□ -1.84
SPB4YFL002C LCB3P47013 409 aa3.55□□□□□ -1.84
SPB4YFL002C SCW4P53334 386 aaKnown RBP3.55□□□□□ -1.84
SPB4YFL002C MRPL50P53724 139 aa3.55□□□□□ -1.84
SPB4YFL002C NUP116Q02630 1113 aa3.55□□□□□ -1.84
SPB4YFL002C TDA1Q03533 586 aa3.55□□□□□ -1.84
SPB4YFL002C YDL114WQ07530 308 aa3.55□□□□□ -1.84
SPB4YFL002C DDC1Q08949 612 aa3.55□□□□□ -1.84
SPB4YFL002C RPN6Q12377 434 aa3.55□□□□□ -1.84
SPB4YFL002C YOS9Q99220 542 aa3.55□□□□□ -1.84
SPB4YFL002C REP1P03871 373 aa3.54□□□□□ -1.84
SPB4YFL002C CDC36P06100 191 aaPredicted RBP3.54□□□□□ -1.84
SPB4YFL002C CYC3P06182 269 aa3.54□□□□□ -1.84
SPB4YFL002C RPC37P36121 282 aa3.54□□□□□ -1.84
SPB4YFL002C AIM29P36154 155 aa3.54□□□□□ -1.84
SPB4YFL002C RCK2P38623 610 aa3.54□□□□□ -1.84
SPB4YFL002C MAM33P40513 266 aa3.54□□□□□ -1.84
SPB4YFL002C WWM1P43582 211 aaKnown RBP3.54□□□□□ -1.84
SPB4YFL002C PMT4P46971 762 aa3.54□□□□□ -1.84
SPB4YFL002C TIS11P47977 285 aa3.54□□□□□ -1.84
SPB4YFL002C TRM82Q03774 444 aa3.54□□□□□ -1.84
SPB4YFL002C SNX41Q04053 625 aa3.54□□□□□ -1.84
SPB4YFL002C MYO5Q04439 1219 aaKnown RBP3.54□□□□□ -1.84
SPB4YFL002C TSR1Q07381 788 aaKnown RBP3.54□□□□□ -1.84
SPB4YFL002C SNA4Q07549 140 aa3.54□□□□□ -1.84
SPB4YFL002C DAP1Q12091 152 aa3.54□□□□□ -1.84
SPB4YFL002C FCY22Q12119 530 aa3.54□□□□□ -1.84
SPB4YFL002C YBL111CQ3E7Y5 667 aa3.54□□□□□ -1.84
SPB4YFL002C HIS1P00498 297 aaKnown RBP3.54□□□□□ -1.84
SPB4YFL002C ILV1P00927 576 aaKnown RBP3.54□□□□□ -1.84
SPB4YFL002C MRP1P10662 321 aaKnown RBP3.54□□□□□ -1.84
SPB4YFL002C CHA1P25379 360 aaKnown RBP3.54□□□□□ -1.84
SPB4YFL002C KTR6P54070 446 aa3.54□□□□□ -1.84
SPB4YFL002C YPR091CQ06833 770 aa3.54□□□□□ -1.84
SPB4YFL002C RDL2Q08742 149 aaKnown RBP3.54□□□□□ -1.84
SPB4YFL002C SLM3Q12093 417 aa3.54□□□□□ -1.84
SPB4YFL002C MSH5Q12175 901 aa3.54□□□□□ -1.84
SPB4YFL002C YGK3Q12222 375 aaPredicted RBP3.54□□□□□ -1.84
SPB4YFL002C HEM4P06174 275 aa3.53□□□□□ -1.84
SPB4YFL002C FUN26P31381 517 aa3.53□□□□□ -1.84
SPB4YFL002C MCH2P36032 473 aa3.53□□□□□ -1.84
SPB4YFL002C CAB3P36076 571 aa3.53□□□□□ -1.84
SPB4YFL002C YFL067WP43537 175 aa3.53□□□□□ -1.84
SPB4YFL002C NCA3P46955 337 aa3.53□□□□□ -1.84
SPB4YFL002C MST27P53176 234 aa3.53□□□□□ -1.84
SPB4YFL002C CPD1P53314 239 aa3.53□□□□□ -1.84
SPB4YFL002C MTM1P53320 366 aa3.53□□□□□ -1.84
SPB4YFL002C WSC2P53832 503 aa3.53□□□□□ -1.84
SPB4YFL002C MRPS17Q03246 237 aaPredicted RBP3.53□□□□□ -1.84
SPB4YFL002C YMR010WQ03687 405 aa3.53□□□□□ -1.84
SPB4YFL002C VBA1Q04301 562 aa3.53□□□□□ -1.84
SPB4YFL002C SRL1Q08673 210 aa3.53□□□□□ -1.84
SPB4YFL002C YOR387CQ08910 206 aa3.53□□□□□ -1.84
SPB4YFL002C YDL109CQ12103 647 aa3.53□□□□□ -1.84
SPB4YFL002C FRE8Q12209 686 aa3.53□□□□□ -1.84
SPB4YFL002C UTP23Q12339 254 aaKnown RBP3.53□□□□□ -1.84
SPB4YFL002C RPL23AP0CX41 137 aaKnown RBP3.52□□□□□ -1.85
SPB4YFL002C RPL23BP0CX42 137 aaKnown RBP3.52□□□□□ -1.85
SPB4YFL002C MATALPHA1P0CY06 175 aa3.52□□□□□ -1.85
SPB4YFL002C HMLALPHA1P0CY07 175 aa3.52□□□□□ -1.85
SPB4YFL002C MCK1P21965 375 aaKnown RBP3.52□□□□□ -1.85
SPB4YFL002C RPS5P26783 225 aaKnown RBP3.52□□□□□ -1.85
SPB4YFL002C LDB7P38210 180 aa3.52□□□□□ -1.85
SPB4YFL002C NPT1P39683 429 aaKnown RBP3.52□□□□□ -1.85
SPB4YFL002C SWC4P53201 476 aa3.52□□□□□ -1.85
SPB4YFL002C MSO1P53604 210 aaKnown RBP3.52□□□□□ -1.85
SPB4YFL002C NOP13P53883 403 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
SPB4YFL002C OST6Q03723 332 aa3.52□□□□□ -1.85
SPB4YFL002C ENT5Q03769 411 aaKnown RBP3.52□□□□□ -1.85
SPB4YFL002C KRE28Q04431 385 aa3.52□□□□□ -1.85
SPB4YFL002C SSQ1Q05931 657 aaPredicted RBP3.52□□□□□ -1.85
SPB4YFL002C TMS1Q12116 473 aa3.52□□□□□ -1.85
SPB4YFL002C POM33Q12164 279 aa3.52□□□□□ -1.85
SPB4YFL002C TRP1P00912 224 aa3.51□□□□□ -1.85
SPB4YFL002C RPS18AP0CX55 146 aaKnown RBP3.51□□□□□ -1.85
SPB4YFL002C RPS18BP0CX56 146 aaPredicted RBP3.51□□□□□ -1.85
SPB4YFL002C RPL16BP26785 198 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms