RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C TRM5P38793 499 aa5.89□□□□□ -1.47
SHO1YER118C POG1P40473 351 aa5.89□□□□□ -1.47
SHO1YER118C RPL10P41805 221 aaKnown RBP5.89□□□□□ -1.47
SHO1YER118C NBP1P52919 319 aaPredicted RBP5.89□□□□□ -1.47
SHO1YER118C VEL1P53058 206 aa5.89□□□□□ -1.47
SHO1YER118C SPC2Q04969 178 aa5.89□□□□□ -1.47
SHO1YER118C GLO2Q05584 274 aa5.89□□□□□ -1.47
SHO1YER118C GAT3Q07928 141 aa5.89□□□□□ -1.47
SHO1YER118C PLB3Q08108 686 aa5.89□□□□□ -1.47
SHO1YER118C ACF2Q12168 779 aa5.89□□□□□ -1.47
SHO1YER118C YPR053CQ6Q5F3 151 aa5.89□□□□□ -1.47
SHO1YER118C TY1B-DR4Q07793 1604 aa5.88□□□□□ -1.47
SHO1YER118C PAB1P04147 577 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
SHO1YER118C AQY1P0CD91 305 aa5.88□□□□□ -1.47
SHO1YER118C HEM15P16622 393 aa5.88□□□□□ -1.47
SHO1YER118C NAM9P27929 486 aa5.88□□□□□ -1.47
SHO1YER118C PUB1P32588 453 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
SHO1YER118C YKL063CP35725 167 aa5.88□□□□□ -1.47
SHO1YER118C RPH1P39956 796 aa5.88□□□□□ -1.47
SHO1YER118C YJL043WP47053 257 aa5.88□□□□□ -1.47
SHO1YER118C JHD2P47156 728 aaPredicted RBP5.88□□□□□ -1.47
SHO1YER118C NIF3P53081 288 aa5.88□□□□□ -1.47
SHO1YER118C NRD1P53617 575 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
SHO1YER118C YIP3P53633 176 aa5.88□□□□□ -1.47
SHO1YER118C ERG13P54839 491 aaKnown RBP5.88□□□□□ -1.47
SHO1YER118C NUP100Q02629 959 aa5.88□□□□□ -1.47
SHO1YER118C SEC13Q04491 297 aaKnown RBP5.88□□□□□ -1.47
SHO1YER118C PEX10Q05568 337 aa5.88□□□□□ -1.47
SHO1YER118C NNT1Q05874 261 aa5.88□□□□□ -1.47
SHO1YER118C AIM39Q08223 395 aa5.88□□□□□ -1.47
SHO1YER118C PER33Q12144 273 aa5.88□□□□□ -1.47
SHO1YER118C IZH4Q99393 312 aa5.88□□□□□ -1.47
SHO1YER118C RPL31AP0C2H8 113 aaKnown RBP5.87□□□□□ -1.47
SHO1YER118C SPO11P23179 398 aa5.87□□□□□ -1.47
SHO1YER118C MEI4P29467 408 aa5.87□□□□□ -1.47
SHO1YER118C PRX1P34227 261 aaKnown RBP5.87□□□□□ -1.47
SHO1YER118C BMT2P38278 337 aa5.87□□□□□ -1.47
SHO1YER118C POP7P38291 140 aa5.87□□□□□ -1.47
SHO1YER118C IKI1P38874 309 aa5.87□□□□□ -1.47
SHO1YER118C YER121WP40076 114 aa5.87□□□□□ -1.47
SHO1YER118C YNR048WP53740 393 aa5.87□□□□□ -1.47
SHO1YER118C CDC14Q00684 551 aa5.87□□□□□ -1.47
SHO1YER118C GIS1Q03833 894 aa5.87□□□□□ -1.47
SHO1YER118C YDL109CQ12103 647 aa5.87□□□□□ -1.47
SHO1YER118C MEX67Q99257 599 aaKnown RBP5.87□□□□□ -1.47
SHO1YER118C POM152P39685 1337 aa5.87□□□□□ -1.47
SHO1YER118C SSC1P0CS90 654 aaKnown RBP5.86□□□□□ -1.47
SHO1YER118C YAR066WP0CX18 203 aa5.86□□□□□ -1.47
SHO1YER118C YHR214WP0CX19 203 aa5.86□□□□□ -1.47
SHO1YER118C YEF1P32622 495 aa5.86□□□□□ -1.47
SHO1YER118C LOS1P33418 1100 aaPredicted RBP5.86□□□□□ -1.47
SHO1YER118C YKL187CP34231 750 aa5.86□□□□□ -1.47
SHO1YER118C FZO1P38297 855 aa5.86□□□□□ -1.47
SHO1YER118C AME1P38313 324 aa5.86□□□□□ -1.47
SHO1YER118C YIA6P40556 373 aa5.86□□□□□ -1.47
SHO1YER118C SNZ3P43545 298 aa5.86□□□□□ -1.47
SHO1YER118C ASG7P46993 209 aa5.86□□□□□ -1.47
SHO1YER118C MGA1P53050 456 aa5.86□□□□□ -1.47
SHO1YER118C SNZ2P53824 298 aa5.86□□□□□ -1.47
SHO1YER118C MRS2Q01926 470 aa5.86□□□□□ -1.47
SHO1YER118C RDL1Q12305 139 aaKnown RBP5.86□□□□□ -1.47
SHO1YER118C MON2P48563 1636 aaPredicted RBP5.85□□□□□ -1.47
SHO1YER118C QCR2P07257 368 aa5.85□□□□□ -1.47
SHO1YER118C POF1P25576 258 aa5.85□□□□□ -1.47
SHO1YER118C YCR102CP25608 368 aa5.85□□□□□ -1.47
SHO1YER118C TSA1P34760 196 aaKnown RBP5.85□□□□□ -1.47
SHO1YER118C YNK1P36010 153 aaKnown RBP5.85□□□□□ -1.47
SHO1YER118C GPX2P38143 162 aa5.85□□□□□ -1.47
SHO1YER118C OSH3P38713 996 aaKnown RBP5.85□□□□□ -1.47
SHO1YER118C GEP4P38812 185 aa5.85□□□□□ -1.47
SHO1YER118C YPT35P38815 214 aaKnown RBP5.85□□□□□ -1.47
SHO1YER118C SOP4P39543 234 aaPredicted RBP5.85□□□□□ -1.47
SHO1YER118C FRT2P39734 528 aa5.85□□□□□ -1.47
SHO1YER118C GAB1P41733 394 aa5.85□□□□□ -1.47
SHO1YER118C LSM1P47017 172 aaKnown RBP5.85□□□□□ -1.47
SHO1YER118C YJR079WP47126 109 aa5.85□□□□□ -1.47
SHO1YER118C MST27P53176 234 aa5.85□□□□□ -1.47
SHO1YER118C STP1Q00947 519 aa5.85□□□□□ -1.47
SHO1YER118C CTF19Q02732 369 aa5.85□□□□□ -1.47
SHO1YER118C CTL1Q03220 320 aaKnown RBP5.85□□□□□ -1.47
SHO1YER118C BNA5Q05979 453 aa5.85□□□□□ -1.47
SHO1YER118C YOL073CQ08232 322 aa5.85□□□□□ -1.47
SHO1YER118C TPT1Q12272 230 aaKnown RBP5.85□□□□□ -1.47
SHO1YER118C EXO70P19658 623 aa5.84□□□□□ -1.47
SHO1YER118C YCR100CP25606 316 aa5.84□□□□□ -1.47
SHO1YER118C MUD1P32605 298 aaKnown RBP5.84□□□□□ -1.47
SHO1YER118C CDC13P32797 924 aaKnown RBP5.84□□□□□ -1.47
SHO1YER118C TOD6P34219 525 aa5.84□□□□□ -1.47
SHO1YER118C FRE2P36033 711 aa5.84□□□□□ -1.47
SHO1YER118C FIG1P38224 298 aa5.84□□□□□ -1.47
SHO1YER118C YHK8P38776 514 aa5.84□□□□□ -1.47
SHO1YER118C SRP14P38985 146 aa5.84□□□□□ -1.47
SHO1YER118C PAC2P39937 518 aa5.84□□□□□ -1.47
SHO1YER118C GDS1P41913 522 aa5.84□□□□□ -1.47
SHO1YER118C YFR057WP43625 151 aa5.84□□□□□ -1.47
SHO1YER118C MIC26P50087 233 aa5.84□□□□□ -1.47
SHO1YER118C PHO23P50947 330 aa5.84□□□□□ -1.47
SHO1YER118C SEC10Q06245 871 aa5.84□□□□□ -1.47
SHO1YER118C TMS1Q12116 473 aa5.84□□□□□ -1.47
SHO1YER118C TEF1P02994 458 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms