RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W YKL100CP34248 587 aa3.78□□□□□ -1.8
SPT3YDR392W BYE1P36106 594 aa3.78□□□□□ -1.8
SPT3YDR392W EXO84P38261 753 aa3.78□□□□□ -1.8
SPT3YDR392W LAS21P40367 830 aa3.78□□□□□ -1.8
SPT3YDR392W MSS11Q03825 758 aa3.78□□□□□ -1.8
SPT3YDR392W RAD33Q04231 177 aa3.78□□□□□ -1.8
SPT3YDR392W PSR1Q07800 427 aa3.78□□□□□ -1.8
SPT3YDR392W RPL19AP0CX82 189 aaKnown RBP3.77□□□□□ -1.81
SPT3YDR392W RPL19BP0CX83 189 aaPredicted RBP3.77□□□□□ -1.81
SPT3YDR392W NOP1P15646 327 aaKnown RBP3.77□□□□□ -1.81
SPT3YDR392W HNM1P19807 563 aa3.77□□□□□ -1.81
SPT3YDR392W PHO3P24031 467 aa3.77□□□□□ -1.81
SPT3YDR392W GPX1P36014 167 aa3.77□□□□□ -1.81
SPT3YDR392W TCM62P38228 572 aaKnown RBP3.77□□□□□ -1.81
SPT3YDR392W NAB3P38996 802 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
SPT3YDR392W YER084WP40057 128 aa3.77□□□□□ -1.81
SPT3YDR392W RIO2P40160 425 aaKnown RBP3.77□□□□□ -1.81
SPT3YDR392W CAB2P40506 365 aa3.77□□□□□ -1.81
SPT3YDR392W PRM10P42946 383 aa3.77□□□□□ -1.81
SPT3YDR392W AVT4P50944 713 aa3.77□□□□□ -1.81
SPT3YDR392W UBC13P52490 153 aa3.77□□□□□ -1.81
SPT3YDR392W YIP5P53108 310 aa3.77□□□□□ -1.81
SPT3YDR392W SLD3P53135 668 aa3.77□□□□□ -1.81
SPT3YDR392W TPC1P53257 314 aa3.77□□□□□ -1.81
SPT3YDR392W COS1P53822 381 aa3.77□□□□□ -1.81
SPT3YDR392W YMR279CQ03263 540 aa3.77□□□□□ -1.81
SPT3YDR392W CTS2Q06350 511 aa3.77□□□□□ -1.81
SPT3YDR392W LOT6Q07923 191 aa3.77□□□□□ -1.81
SPT3YDR392W GAT3Q07928 141 aa3.77□□□□□ -1.81
SPT3YDR392W HOS1Q12214 470 aa3.77□□□□□ -1.81
SPT3YDR392W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
SPT3YDR392W TIM9O74700 87 aa3.76□□□□□ -1.81
SPT3YDR392W SLM5P25345 492 aaKnown RBP3.76□□□□□ -1.81
SPT3YDR392W SSE2P32590 693 aaKnown RBP3.76□□□□□ -1.81
SPT3YDR392W YBR144CP34215 104 aa3.76□□□□□ -1.81
SPT3YDR392W IMD2P38697 523 aaKnown RBP3.76□□□□□ -1.81
SPT3YDR392W MNN1P39106 762 aa3.76□□□□□ -1.81
SPT3YDR392W NPT1P39683 429 aaKnown RBP3.76□□□□□ -1.81
SPT3YDR392W AAD10P47182 288 aa3.76□□□□□ -1.81
SPT3YDR392W IMD3P50095 523 aaKnown RBP3.76□□□□□ -1.81
SPT3YDR392W YNR064CP53750 290 aa3.76□□□□□ -1.81
SPT3YDR392W YMR102CQ03177 834 aa3.76□□□□□ -1.81
SPT3YDR392W MHF1Q3E835 90 aa3.76□□□□□ -1.81
SPT3YDR392W GCD2P12754 651 aaPredicted RBP3.75□□□□□ -1.81
SPT3YDR392W GCY1P14065 312 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81 RIP-Chip
SPT3YDR392W PBN1P25580 416 aa3.75□□□□□ -1.81
SPT3YDR392W PUP2P32379 260 aa3.75□□□□□ -1.81
SPT3YDR392W MRPL10P36520 322 aa3.75□□□□□ -1.81
SPT3YDR392W MRPL36P36531 177 aa3.75□□□□□ -1.81
SPT3YDR392W SDH4P37298 181 aa3.75□□□□□ -1.81
SPT3YDR392W SEC31P38968 1273 aaKnown RBP3.75□□□□□ -1.81
SPT3YDR392W FIP1P45976 327 aa3.75□□□□□ -1.81
SPT3YDR392W AIP1P46680 615 aaKnown RBP3.75□□□□□ -1.81
SPT3YDR392W ACT1P60010 375 aaKnown RBP3.75□□□□□ -1.81
SPT3YDR392W SPO19Q03029 223 aa3.75□□□□□ -1.81
SPT3YDR392W MSC3Q05812 728 aa3.75□□□□□ -1.81
SPT3YDR392W GRE1Q08969 168 aa3.75□□□□□ -1.81
SPT3YDR392W PUT2P07275 575 aa3.74□□□□□ -1.81
SPT3YDR392W RNR2P09938 399 aaKnown RBP3.74□□□□□ -1.81
SPT3YDR392W CMK2P22517 447 aa3.74□□□□□ -1.81
SPT3YDR392W EHD3P28817 500 aa3.74□□□□□ -1.81
SPT3YDR392W SUA7P29055 345 aaPredicted RBP3.74□□□□□ -1.81
SPT3YDR392W PPG1P32838 368 aa3.74□□□□□ -1.81
SPT3YDR392W SDH8P38345 138 aa3.74□□□□□ -1.81
SPT3YDR392W PEX18P38855 283 aa3.74□□□□□ -1.81
SPT3YDR392W SGN1P40561 250 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
SPT3YDR392W YJR012CP47087 207 aa3.74□□□□□ -1.81
SPT3YDR392W COG2P53271 262 aa3.74□□□□□ -1.81
SPT3YDR392W RSM27P53305 110 aa3.74□□□□□ -1.81
SPT3YDR392W RHO5P53879 331 aaKnown RBP3.74□□□□□ -1.81
SPT3YDR392W VPS20Q04272 221 aa3.74□□□□□ -1.81
SPT3YDR392W GTB1Q04924 702 aa3.74□□□□□ -1.81
SPT3YDR392W SML1Q04964 104 aa3.74□□□□□ -1.81
SPT3YDR392W YPR078CQ06813 372 aa3.74□□□□□ -1.81
SPT3YDR392W NUS1Q12063 375 aa3.74□□□□□ -1.81
SPT3YDR392W RPL22AP05749 121 aaKnown RBP3.73□□□□□ -1.81
SPT3YDR392W CDC37P06101 506 aaKnown RBP3.73□□□□□ -1.81
SPT3YDR392W KGD1P20967 1014 aaKnown RBP3.73□□□□□ -1.81
SPT3YDR392W PRX1P34227 261 aaKnown RBP3.73□□□□□ -1.81
SPT3YDR392W SCO2P38072 301 aa3.73□□□□□ -1.81
SPT3YDR392W NIT2P47016 307 aa3.73□□□□□ -1.81
SPT3YDR392W PXR1P53335 271 aaPredicted RBP3.73□□□□□ -1.81
SPT3YDR392W SPP2Q02521 185 aa3.73□□□□□ -1.81
SPT3YDR392W YPL225WQ08971 146 aaKnown RBP3.73□□□□□ -1.81
SPT3YDR392W RUD3Q12234 484 aaKnown RBP3.73□□□□□ -1.81
SPT3YDR392W STE7P06784 515 aa3.72□□□□□ -1.81
SPT3YDR392W ART10P18634 518 aaKnown RBP3.72□□□□□ -1.81
SPT3YDR392W AMD2P22580 549 aa3.72□□□□□ -1.81
SPT3YDR392W ACH1P32316 526 aa3.72□□□□□ -1.81
SPT3YDR392W CLB6P32943 380 aa3.72□□□□□ -1.81
SPT3YDR392W RPC25P35718 212 aa3.72□□□□□ -1.81
SPT3YDR392W CBP4P37267 147 aa3.72□□□□□ -1.81
SPT3YDR392W GPI18P38211 433 aa3.72□□□□□ -1.81
SPT3YDR392W MET18P40469 1032 aa3.72□□□□□ -1.81
SPT3YDR392W SOL1P50278 321 aa3.72□□□□□ -1.81
SPT3YDR392W SYF2P53277 215 aaPredicted RBP3.72□□□□□ -1.81
SPT3YDR392W RNH70P53331 553 aa3.72□□□□□ -1.81
SPT3YDR392W NCE101Q02820 53 aa3.72□□□□□ -1.81
SPT3YDR392W IRC25Q07951 179 aa3.72□□□□□ -1.81
SPT3YDR392W RDL2Q08742 149 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms