RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W RTG1P32607 177 aa5.11□□□□□ -1.59
FOB1YDR110W GSP1P32835 219 aaKnown RBP5.11□□□□□ -1.59
FOB1YDR110W GSP2P32836 220 aaKnown RBP5.11□□□□□ -1.59
FOB1YDR110W NTR2P36118 322 aaPredicted RBP5.11□□□□□ -1.59
FOB1YDR110W ECM13P38195 257 aa5.11□□□□□ -1.59
FOB1YDR110W DIA4P38705 446 aaPredicted RBP5.11□□□□□ -1.59
FOB1YDR110W YHR112CP38716 378 aa5.11□□□□□ -1.59
FOB1YDR110W LCP5P40079 357 aaPredicted RBP5.11□□□□□ -1.59
FOB1YDR110W YFH7P43591 353 aa5.11□□□□□ -1.59
FOB1YDR110W CIN2P46670 268 aa5.11□□□□□ -1.59
FOB1YDR110W ATG27P46989 271 aa5.11□□□□□ -1.59
FOB1YDR110W ADO1P47143 340 aaKnown RBP5.11□□□□□ -1.59
FOB1YDR110W YPT32P51996 222 aaKnown RBP5.11□□□□□ -1.59
FOB1YDR110W VPS73P53142 486 aaKnown RBP5.11□□□□□ -1.59
FOB1YDR110W MSO1P53604 210 aaKnown RBP5.11□□□□□ -1.59
FOB1YDR110W DYN2Q02647 92 aa5.11□□□□□ -1.59
FOB1YDR110W MSC1Q03104 513 aa5.11□□□□□ -1.59
FOB1YDR110W PLB2Q03674 706 aa5.11□□□□□ -1.59
FOB1YDR110W PLM2Q04383 521 aa5.11□□□□□ -1.59
FOB1YDR110W RAD34Q06665 692 aa5.11□□□□□ -1.59
FOB1YDR110W YET3Q07451 203 aa5.11□□□□□ -1.59
FOB1YDR110W FRE5Q08908 694 aa5.11□□□□□ -1.59
FOB1YDR110W SAM4Q08985 325 aaKnown RBP5.11□□□□□ -1.59
FOB1YDR110W FCY22Q12119 530 aa5.11□□□□□ -1.59
FOB1YDR110W RKM5Q12367 367 aa5.11□□□□□ -1.59
FOB1YDR110W FSH3Q99369 266 aa5.11□□□□□ -1.59
FOB1YDR110W RPP0P05317 312 aaKnown RBP5.1□□□□□ -1.59
FOB1YDR110W GAR1P28007 205 aaKnown RBP5.1□□□□□ -1.59
FOB1YDR110W DSS4P32601 143 aa5.1□□□□□ -1.59
FOB1YDR110W REC114P32841 428 aa5.1□□□□□ -1.59
FOB1YDR110W YCR087C-AP37263 153 aa5.1□□□□□ -1.59
FOB1YDR110W RRP4P38792 359 aaKnown RBP5.1□□□□□ -1.59
FOB1YDR110W PAC11P40960 533 aa5.1□□□□□ -1.59
FOB1YDR110W FAR3P46671 204 aa5.1□□□□□ -1.59
FOB1YDR110W NBP1P52919 319 aaPredicted RBP5.1□□□□□ -1.59
FOB1YDR110W VEL1P53058 206 aa5.1□□□□□ -1.59
FOB1YDR110W CWC25P53854 179 aaKnown RBP5.1□□□□□ -1.59
FOB1YDR110W TPS1Q00764 495 aaKnown RBP5.1□□□□□ -1.59
FOB1YDR110W SED5Q01590 340 aa5.1□□□□□ -1.59
FOB1YDR110W RUB1Q03919 77 aa5.1□□□□□ -1.59
FOB1YDR110W SEC13Q04491 297 aaKnown RBP5.1□□□□□ -1.59
FOB1YDR110W NEJ1Q06148 342 aa5.1□□□□□ -1.59
FOB1YDR110W ALE1Q08548 619 aa5.1□□□□□ -1.59
FOB1YDR110W PSK1P31374 1356 aa5.1□□□□□ -1.59
FOB1YDR110W ADE6P38972 1358 aaKnown RBP5.1□□□□□ -1.59
FOB1YDR110W ZWF1P11412 505 aaKnown RBP5.09□□□□□ -1.59
FOB1YDR110W FEN2P25621 512 aaKnown RBP5.09□□□□□ -1.59
FOB1YDR110W POP5P28005 173 aa5.09□□□□□ -1.59
FOB1YDR110W VHC1P38329 1120 aa5.09□□□□□ -1.59
FOB1YDR110W RRP3P38712 501 aaKnown RBP5.09□□□□□ -1.59
FOB1YDR110W PHO90P39535 881 aa5.09□□□□□ -1.59
FOB1YDR110W GAT2P40209 560 aa5.09□□□□□ -1.59
FOB1YDR110W CSM2P40465 213 aa5.09□□□□□ -1.59
FOB1YDR110W MRPL49P40858 161 aaPredicted RBP5.09□□□□□ -1.59
FOB1YDR110W JHD2P47156 728 aaPredicted RBP5.09□□□□□ -1.59
FOB1YDR110W PMT5P52867 743 aa5.09□□□□□ -1.59
FOB1YDR110W ORM1P53224 222 aa5.09□□□□□ -1.59
FOB1YDR110W MRPL22P53881 309 aa5.09□□□□□ -1.59
FOB1YDR110W TIM44Q01852 431 aa5.09□□□□□ -1.59
FOB1YDR110W NUP49Q02199 472 aa5.09□□□□□ -1.59
FOB1YDR110W REC102Q02721 264 aa5.09□□□□□ -1.59
FOB1YDR110W DLT1Q04216 342 aa5.09□□□□□ -1.59
FOB1YDR110W TPO3Q06451 622 aa5.09□□□□□ -1.59
FOB1YDR110W POM33Q12164 279 aa5.09□□□□□ -1.59
FOB1YDR110W RNH203Q12338 110 aa5.09□□□□□ -1.59
FOB1YDR110W BBP1Q12365 385 aa5.09□□□□□ -1.59
FOB1YDR110W YBL029C-AQ3E756 94 aa5.09□□□□□ -1.59
FOB1YDR110W SPT3P06844 337 aa5.09□□□□□ -1.6
FOB1YDR110W ERS1P17261 260 aa5.09□□□□□ -1.6
FOB1YDR110W SGV1P23293 657 aaKnown RBP5.09□□□□□ -1.6
FOB1YDR110W KIN82P25341 720 aa5.09□□□□□ -1.6
FOB1YDR110W ELF1P36053 145 aa5.09□□□□□ -1.6
FOB1YDR110W HEK2P38199 381 aaKnown RBP RIP-Chip data5.09□□□□□ -1.6not detected
FOB1YDR110W YBP1P38315 674 aa5.09□□□□□ -1.6
FOB1YDR110W WSC4P38739 605 aa5.09□□□□□ -1.6
FOB1YDR110W YHR078WP38799 552 aa5.09□□□□□ -1.6
FOB1YDR110W COG3P40094 801 aa5.09□□□□□ -1.6
FOB1YDR110W ASG7P46993 209 aa5.09□□□□□ -1.6
FOB1YDR110W PHB2P50085 310 aa5.09□□□□□ -1.6
FOB1YDR110W SEH1P53011 349 aaKnown RBP5.09□□□□□ -1.6
FOB1YDR110W ERG13P54839 491 aaKnown RBP5.09□□□□□ -1.6
FOB1YDR110W CDC14Q00684 551 aa5.09□□□□□ -1.6
FOB1YDR110W RSM23Q01163 450 aa5.09□□□□□ -1.6
FOB1YDR110W SMP3Q04174 516 aa5.09□□□□□ -1.6
FOB1YDR110W AGC1Q12482 902 aa5.09□□□□□ -1.6
FOB1YDR110W YBR255C-AQ3E776 120 aa5.09□□□□□ -1.6
FOB1YDR110W YRF1-2P40105 1681 aa5.08□□□□□ -1.6
FOB1YDR110W CDC8P00572 216 aa5.08□□□□□ -1.6
FOB1YDR110W PPR1P07272 904 aaPredicted RBP5.08□□□□□ -1.6
FOB1YDR110W GAC1P28006 793 aa5.08□□□□□ -1.6
FOB1YDR110W CAT2P32796 670 aaKnown RBP5.08□□□□□ -1.6
FOB1YDR110W THI80P35202 319 aa5.08□□□□□ -1.6
FOB1YDR110W SOR1P35497 357 aaKnown RBP5.08□□□□□ -1.6
FOB1YDR110W DRE2P36152 348 aa5.08□□□□□ -1.6
FOB1YDR110W MRX3P38172 270 aa5.08□□□□□ -1.6
FOB1YDR110W INM1P38710 295 aa5.08□□□□□ -1.6
FOB1YDR110W CTF8P38877 133 aa5.08□□□□□ -1.6
FOB1YDR110W VPS52P39904 641 aa5.08□□□□□ -1.6
FOB1YDR110W OXA1P39952 402 aa5.08□□□□□ -1.6
FOB1YDR110W TDA10P42938 290 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms