RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A UFD1P53044 361 aa-0.22□□□□□ -2.44
TFB5YDR079C-A MDM34P53083 459 aa-0.22□□□□□ -2.44
TFB5YDR079C-A YGL138CP53122 345 aa-0.22□□□□□ -2.44
TFB5YDR079C-A COG7P53195 279 aa-0.22□□□□□ -2.44
TFB5YDR079C-A ARP5P53946 755 aa-0.22□□□□□ -2.44
TFB5YDR079C-A YNL046WP53956 172 aa-0.22□□□□□ -2.44
TFB5YDR079C-A RHO3Q00245 231 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A COX12Q01519 83 aa-0.22□□□□□ -2.44
TFB5YDR079C-A LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.22□□□□□ -2.44not detected
TFB5YDR079C-A SED5Q01590 340 aa-0.22□□□□□ -2.44
TFB5YDR079C-A MRS2Q01926 470 aa-0.22□□□□□ -2.44
TFB5YDR079C-A SKO1Q02100 647 aa-0.22□□□□□ -2.44
TFB5YDR079C-A SKI8Q02793 397 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A NGL3Q03210 505 aa-0.22□□□□□ -2.44
TFB5YDR079C-A TDA1Q03533 586 aa-0.22□□□□□ -2.44
TFB5YDR079C-A CGI121Q03705 181 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A YDR131CQ03899 556 aa-0.22□□□□□ -2.44
TFB5YDR079C-A RAV2Q03956 351 aa-0.22□□□□□ -2.44
TFB5YDR079C-A YHP1Q04116 353 aa-0.22□□□□□ -2.44
TFB5YDR079C-A UTP14Q04500 899 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A YDR222WQ04925 415 aa-0.22□□□□□ -2.44
TFB5YDR079C-A COG4Q06096 861 aa-0.22□□□□□ -2.44
TFB5YDR079C-A ATG39Q06159 398 aa-0.22□□□□□ -2.44
TFB5YDR079C-A CTS2Q06350 511 aa-0.22□□□□□ -2.44
TFB5YDR079C-A VPS74Q06385 345 aa-0.22□□□□□ -2.44
TFB5YDR079C-A TAZ1Q06510 381 aa-0.22□□□□□ -2.44
TFB5YDR079C-A ARR1Q06596 294 aa-0.22□□□□□ -2.44
TFB5YDR079C-A VAC14Q06708 880 aa-0.22□□□□□ -2.44
TFB5YDR079C-A ASR1Q06834 288 aa-0.22□□□□□ -2.44
TFB5YDR079C-A ATG10Q07879 167 aa-0.22□□□□□ -2.44
TFB5YDR079C-A LDS2Q08218 356 aa-0.22□□□□□ -2.44
TFB5YDR079C-A VAM10Q08474 114 aa-0.22□□□□□ -2.44
TFB5YDR079C-A PRM3Q08931 133 aa-0.22□□□□□ -2.44
TFB5YDR079C-A FMP40Q08968 688 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A YPL264CQ08980 353 aa-0.22□□□□□ -2.44
TFB5YDR079C-A VPS68Q12016 184 aa-0.22□□□□□ -2.44
TFB5YDR079C-A VPS54Q12071 889 aa-0.22□□□□□ -2.44
TFB5YDR079C-A YPR022CQ12139 1133 aa-0.22□□□□□ -2.44
TFB5YDR079C-A YDL180WQ12301 547 aa-0.22□□□□□ -2.44
TFB5YDR079C-A HIF1Q12373 385 aa-0.22□□□□□ -2.44
TFB5YDR079C-A FRE6Q12473 712 aa-0.22□□□□□ -2.44
TFB5YDR079C-A AVL9Q12500 764 aa-0.22□□□□□ -2.44
TFB5YDR079C-A KSH1Q8TGJ3 72 aa-0.22□□□□□ -2.44
TFB5YDR079C-A LAG2Q92325 660 aa-0.22□□□□□ -2.44
TFB5YDR079C-A YOS9Q99220 542 aa-0.22□□□□□ -2.44
TFB5YDR079C-A FSH3Q99369 266 aa-0.22□□□□□ -2.44
TFB5YDR079C-A RAD50P12753 1312 aa-0.22□□□□□ -2.44
TFB5YDR079C-A BLM10P43583 2143 aa-0.22□□□□□ -2.44
TFB5YDR079C-A TY1B-HO13535 1793 aa-0.22□□□□□ -2.45
TFB5YDR079C-A PMD1P32634 1753 aa-0.22□□□□□ -2.45
TFB5YDR079C-A APC1P53886 1748 aa-0.23□□□□□ -2.45
TFB5YDR079C-A TY1B-DR5P0C2I2 1755 aa-0.23□□□□□ -2.45
TFB5YDR079C-A TY1B-ER2Q03619 1755 aa-0.23□□□□□ -2.45
TFB5YDR079C-A TY1B-DR1Q03855 1755 aa-0.23□□□□□ -2.45
TFB5YDR079C-A TY1B-MR2Q04670 1755 aaKnown RBP-0.23□□□□□ -2.45
TFB5YDR079C-A TY1B-LR1Q12088 1755 aaKnown RBP-0.23□□□□□ -2.45
TFB5YDR079C-A TY1B-NL1Q12112 1755 aa-0.23□□□□□ -2.45
TFB5YDR079C-A TY1B-GR2Q12269 1755 aa-0.23□□□□□ -2.45
TFB5YDR079C-A TY1B-GR3Q12316 1755 aa-0.23□□□□□ -2.45
TFB5YDR079C-A TY1B-ORQ92393 1755 aa-0.23□□□□□ -2.45
TFB5YDR079C-A TY1B-DR3Q99231 1755 aa-0.23□□□□□ -2.45
TFB5YDR079C-A ARG4P04076 463 aaPredicted RBP-0.23□□□□□ -2.45
TFB5YDR079C-A GAL80P04387 435 aa-0.23□□□□□ -2.45
TFB5YDR079C-A RPS3P05750 240 aaKnown RBP-0.23□□□□□ -2.45
TFB5YDR079C-A CDC7P06243 507 aa-0.23□□□□□ -2.45
TFB5YDR079C-A PUT1P09368 476 aa-0.23□□□□□ -2.45
TFB5YDR079C-A IMA3P0CW40 589 aa-0.23□□□□□ -2.45
TFB5YDR079C-A IMA4P0CW41 589 aa-0.23□□□□□ -2.45
TFB5YDR079C-A SST2P11972 698 aaKnown RBP-0.23□□□□□ -2.45
TFB5YDR079C-A TFS1P14306 219 aa-0.23□□□□□ -2.45
TFB5YDR079C-A PUT4P15380 627 aa-0.23□□□□□ -2.45
TFB5YDR079C-A UBC4P15731 148 aa-0.23□□□□□ -2.45
TFB5YDR079C-A UBC5P15732 148 aa-0.23□□□□□ -2.45
TFB5YDR079C-A UGA1P17649 471 aa-0.23□□□□□ -2.45
TFB5YDR079C-A ATP10P18496 279 aa-0.23□□□□□ -2.45
TFB5YDR079C-A SNF6P18888 332 aa-0.23□□□□□ -2.45
TFB5YDR079C-A TOM40P23644 387 aaKnown RBP-0.23□□□□□ -2.45
TFB5YDR079C-A SCO1P23833 295 aa-0.23□□□□□ -2.45
TFB5YDR079C-A PEP3P27801 918 aa-0.23□□□□□ -2.45
TFB5YDR079C-A NDI1P32340 513 aa-0.23□□□□□ -2.45
TFB5YDR079C-A MDH3P32419 343 aaKnown RBP RIP-Chip data-0.23□□□□□ -2.45not detected
TFB5YDR079C-A DPH5P32469 300 aaPredicted RBP-0.23□□□□□ -2.45
TFB5YDR079C-A CAT2P32796 670 aaKnown RBP-0.23□□□□□ -2.45
TFB5YDR079C-A SGE1P33335 543 aa-0.23□□□□□ -2.45
TFB5YDR079C-A YBL055CP34220 418 aaPredicted RBP-0.23□□□□□ -2.45
TFB5YDR079C-A KDX1P36005 433 aa-0.23□□□□□ -2.45
TFB5YDR079C-A MYO3P36006 1272 aa-0.23□□□□□ -2.45
TFB5YDR079C-A STB6P36085 766 aa-0.23□□□□□ -2.45
TFB5YDR079C-A MRPL37P36532 105 aa-0.23□□□□□ -2.45
TFB5YDR079C-A RPL32P38061 130 aaKnown RBP-0.23□□□□□ -2.45
TFB5YDR079C-A MRX3P38172 270 aa-0.23□□□□□ -2.45
TFB5YDR079C-A GPI18P38211 433 aa-0.23□□□□□ -2.45
TFB5YDR079C-A RTC2P38279 296 aa-0.23□□□□□ -2.45
TFB5YDR079C-A PRS2P38620 318 aaKnown RBP-0.23□□□□□ -2.45
TFB5YDR079C-A SRP72P38688 640 aaKnown RBP-0.23□□□□□ -2.45
TFB5YDR079C-A MSR1P38714 643 aa-0.23□□□□□ -2.45
TFB5YDR079C-A GRE3P38715 327 aaKnown RBP RIP-Chip data-0.23□□□□□ -2.45not detected
TFB5YDR079C-A SPC72P39723 622 aa-0.23□□□□□ -2.45
TFB5YDR079C-A AVT2P39981 480 aa-0.23□□□□□ -2.45
TFB5YDR079C-A IRC22P40006 225 aa-0.23□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms