RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W ALG3P38179 458 aa8.68□□□□□ -1.02
SED1YDR077W NAB3P38996 802 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
SED1YDR077W FMC1P40491 155 aa8.68□□□□□ -1.02
SED1YDR077W SNO3P43544 222 aa8.68□□□□□ -1.02
SED1YDR077W MKC7P53379 596 aa8.68□□□□□ -1.02
SED1YDR077W YMR315WQ04869 349 aaKnown RBP8.68□□□□□ -1.02
SED1YDR077W YPS7Q06325 596 aa8.68□□□□□ -1.02
SED1YDR077W IPK1Q06667 281 aa8.68□□□□□ -1.02
SED1YDR077W NGL1Q08213 363 aaKnown RBP8.68□□□□□ -1.02
SED1YDR077W AVO1Q08236 1176 aa8.68□□□□□ -1.02
SED1YDR077W YOR289WQ12012 251 aaPredicted RBP8.68□□□□□ -1.02
SED1YDR077W PRP46Q12417 451 aaPredicted RBP8.68□□□□□ -1.02
SED1YDR077W YOS9Q99220 542 aa8.68□□□□□ -1.02
SED1YDR077W FAS1P07149 2051 aaKnown RBP8.68□□□□□ -1.02
SED1YDR077W COX1P00401 534 aa8.67□□□□□ -1.02
SED1YDR077W NUP1P20676 1076 aa8.67□□□□□ -1.02
SED1YDR077W CWH43P25618 953 aa8.67□□□□□ -1.02
SED1YDR077W SLC1P33333 303 aa8.67□□□□□ -1.02
SED1YDR077W HIS7P33734 552 aaKnown RBP8.67□□□□□ -1.02
SED1YDR077W NIC96P34077 839 aa8.67□□□□□ -1.02
SED1YDR077W GPX1P36014 167 aa8.67□□□□□ -1.02
SED1YDR077W YKL071WP36086 256 aa8.67□□□□□ -1.02
SED1YDR077W RRP4P38792 359 aaKnown RBP8.67□□□□□ -1.02
SED1YDR077W YJL193WP39542 402 aa8.67□□□□□ -1.02
SED1YDR077W FCY21P40039 528 aa8.67□□□□□ -1.02
SED1YDR077W CIN1P40987 1014 aa8.67□□□□□ -1.02
SED1YDR077W YAE1P47118 141 aaPredicted RBP8.67□□□□□ -1.02
SED1YDR077W RHO5P53879 331 aaKnown RBP8.67□□□□□ -1.02
SED1YDR077W PAL1Q05518 499 aaKnown RBP8.67□□□□□ -1.02
SED1YDR077W HDA2Q06629 674 aa8.67□□□□□ -1.02
SED1YDR077W YDL109CQ12103 647 aa8.67□□□□□ -1.02
SED1YDR077W YDL177CQ12257 170 aa8.67□□□□□ -1.02
SED1YDR077W PAR32Q12515 295 aaKnown RBP8.67□□□□□ -1.02
SED1YDR077W CDC31P06704 161 aaKnown RBP8.66□□□□□ -1.02
SED1YDR077W ADE5,7P07244 802 aaKnown RBP8.66□□□□□ -1.02
SED1YDR077W DAT1P13483 248 aaKnown RBP8.66□□□□□ -1.02
SED1YDR077W NCP1P16603 691 aaKnown RBP8.66□□□□□ -1.02
SED1YDR077W FPS1P23900 669 aa8.66□□□□□ -1.02
SED1YDR077W PRE2P30656 287 aaKnown RBP8.66□□□□□ -1.02
SED1YDR077W PUB1P32588 453 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02 RIP-Chip
SED1YDR077W YEF1P32622 495 aa8.66□□□□□ -1.02
SED1YDR077W MTC2P34246 357 aa8.66□□□□□ -1.02
SED1YDR077W RSM22P36056 628 aa8.66□□□□□ -1.02
SED1YDR077W SKN7P38889 622 aa8.66□□□□□ -1.02
SED1YDR077W FET3P38993 636 aa8.66□□□□□ -1.02
SED1YDR077W HXT9P40885 567 aa8.66□□□□□ -1.02
SED1YDR077W YJL218WP40892 196 aaKnown RBP8.66□□□□□ -1.02
SED1YDR077W YJL055WP47044 245 aa8.66□□□□□ -1.02
SED1YDR077W CWC23P52868 283 aaPredicted RBP8.66□□□□□ -1.02
SED1YDR077W LCL3P53153 274 aa8.66□□□□□ -1.02
SED1YDR077W SCW11P53189 542 aa8.66□□□□□ -1.02
SED1YDR077W HXT11P54862 567 aa8.66□□□□□ -1.02
SED1YDR077W YKR005CQ02203 525 aa8.66□□□□□ -1.02
SED1YDR077W EKI1Q03764 534 aa8.66□□□□□ -1.02
SED1YDR077W SEI1Q06058 285 aa8.66□□□□□ -1.02
SED1YDR077W BDS1Q08347 646 aa8.66□□□□□ -1.02
SED1YDR077W THP3Q12049 470 aaKnown RBP8.66□□□□□ -1.02
SED1YDR077W YOL114CQ12322 202 aa8.66□□□□□ -1.02
SED1YDR077W YGR161W-CQ3E744 92 aa8.66□□□□□ -1.02
SED1YDR077W YBL113CQ7M4S9 792 aa8.66□□□□□ -1.02
SED1YDR077W TAD3Q9URQ3 322 aa8.66□□□□□ -1.02
SED1YDR077W HFA1P32874 2273 aa8.66□□□□□ -1.02
SED1YDR077W YEL009C-AA0A023PZF2 135 aa8.65□□□□□ -1.02
SED1YDR077W NFT1P0CE68 1218 aa8.65□□□□□ -1.02
SED1YDR077W TRS65P32893 560 aa8.65□□□□□ -1.02
SED1YDR077W DTR1P38125 572 aa8.65□□□□□ -1.02
SED1YDR077W MTC4P38335 694 aaKnown RBP8.65□□□□□ -1.02
SED1YDR077W YHR180WP38868 163 aa8.65□□□□□ -1.02
SED1YDR077W UME6P39001 836 aa8.65□□□□□ -1.02
SED1YDR077W HIS6P40545 261 aa8.65□□□□□ -1.02
SED1YDR077W IMD3P50095 523 aaKnown RBP8.65□□□□□ -1.02
SED1YDR077W RAI1P53063 387 aaKnown RBP8.65□□□□□ -1.02
SED1YDR077W BUD9P53226 547 aa8.65□□□□□ -1.02
SED1YDR077W OGG1P53397 376 aaPredicted RBP8.65□□□□□ -1.02
SED1YDR077W COQ10Q08058 207 aa8.65□□□□□ -1.02
SED1YDR077W FRE5Q08908 694 aa8.65□□□□□ -1.02
SED1YDR077W TY1A-NL1Q12391 440 aaKnown RBP8.65□□□□□ -1.02
SED1YDR077W SUS1Q6WNK7 96 aa8.65□□□□□ -1.02
SED1YDR077W RPP2BP02400 110 aaKnown RBP8.64□□□□□ -1.03
SED1YDR077W KIN28P06242 306 aa8.64□□□□□ -1.03
SED1YDR077W ARF1P11076 181 aaKnown RBP8.64□□□□□ -1.03
SED1YDR077W YCL002CP25565 263 aa8.64□□□□□ -1.03
SED1YDR077W ECT1P33412 323 aa8.64□□□□□ -1.03
SED1YDR077W SEC66P33754 206 aa8.64□□□□□ -1.03
SED1YDR077W SDS22P36047 338 aa8.64□□□□□ -1.03
SED1YDR077W CHK1P38147 527 aa8.64□□□□□ -1.03
SED1YDR077W OCA5P38738 679 aa8.64□□□□□ -1.03
SED1YDR077W RTT105P40063 208 aa8.64□□□□□ -1.03
SED1YDR077W YIL165CP40446 119 aa8.64□□□□□ -1.03
SED1YDR077W BAP3P41815 604 aa8.64□□□□□ -1.03
SED1YDR077W CUP9P41817 306 aa8.64□□□□□ -1.03
SED1YDR077W GDS1P41913 522 aa8.64□□□□□ -1.03
SED1YDR077W PMT3P47190 753 aa8.64□□□□□ -1.03
SED1YDR077W RRN9P53437 365 aa8.64□□□□□ -1.03
SED1YDR077W CUZ1P53899 274 aa8.64□□□□□ -1.03
SED1YDR077W DCR2Q05924 578 aa8.64□□□□□ -1.03
SED1YDR077W YOL073CQ08232 322 aa8.64□□□□□ -1.03
SED1YDR077W MCP1Q12106 302 aa8.64□□□□□ -1.03
SED1YDR077W RLM1Q12224 676 aa8.64□□□□□ -1.03
SED1YDR077W AHC2P25649 128 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms