RNA–Protein interactions for RNA: YDL208W

NHP2, Transcript of Protein related to mammalian high mobility group (HMG) proteins, yeast

Gene NHP2, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP2	YDL208W	MED1	Q12321	566 aa		0.92	□□□□□ -2.26
NHP2	YDL208W	RTN2	Q12443	393 aa		0.92	□□□□□ -2.26
NHP2	YDL208W	HEM4	P06174	275 aa		0.91	□□□□□ -2.26
NHP2	YDL208W	COQ1	P18900	473 aa		0.91	□□□□□ -2.26
NHP2	YDL208W	OPI1	P21957	404 aa		0.91	□□□□□ -2.26
NHP2	YDL208W	TIP20	P33891	701 aa		0.91	□□□□□ -2.26
NHP2	YDL208W	MYO3	P36006	1272 aa		0.91	□□□□□ -2.26
NHP2	YDL208W	VHS2	P40463	436 aa		0.91	□□□□□ -2.26
NHP2	YDL208W	RPT4	P53549	437 aa	Known RBP	0.91	□□□□□ -2.26
NHP2	YDL208W	ERO1	Q03103	563 aa		0.91	□□□□□ -2.26
NHP2	YDL208W	YMR130W	Q04223	302 aa		0.91	□□□□□ -2.26
NHP2	YDL208W	YOL029C	Q08187	201 aa		0.91	□□□□□ -2.26
NHP2	YDL208W	PDR18	P53756	1333 aa		0.9	□□□□□ -2.26
NHP2	YDL208W	ADH3	P07246	375 aa	Known RBP	0.9	□□□□□ -2.27
NHP2	YDL208W	ARO3	P14843	370 aa	Known RBP	0.9	□□□□□ -2.27
NHP2	YDL208W	FRS2	P15625	503 aa	Known RBP	0.9	□□□□□ -2.27
NHP2	YDL208W	CKA1	P15790	372 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	ERG3	P32353	365 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.9	□□□□□ -2.27	not detected
NHP2	YDL208W	YMR262W	P38430	313 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	YFH7	P43591	353 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	BUD13	P46947	266 aa	Predicted RBP	0.9	□□□□□ -2.27
NHP2	YDL208W	EAF6	P47128	113 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	TOS2	P50078	622 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	ROG1	P53118	685 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	OCA2	P53949	197 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	IRC4	Q03036	179 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	VPS20	Q04272	221 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	DON1	Q05610	365 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	DIB1	Q06819	143 aa	Predicted RBP	0.9	□□□□□ -2.27
NHP2	YDL208W	YPL150W	Q12152	901 aa		0.9	□□□□□ -2.27
NHP2	YDL208W	PRP46	Q12417	451 aa	Predicted RBP	0.9	□□□□□ -2.27
NHP2	YDL208W	TUS1	Q06412	1307 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	TDH2	P00358	332 aa	Known RBP	0.89	□□□□□ -2.27
NHP2	YDL208W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.89	□□□□□ -2.27	not detected
NHP2	YDL208W	MET2	P08465	486 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	RNR2	P09938	399 aa	Known RBP	0.89	□□□□□ -2.27
NHP2	YDL208W	MATALPHA2	P0CY08	210 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	HMLALPHA2	P0CY09	210 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	VPS1	P21576	704 aa	Known RBP	0.89	□□□□□ -2.27
NHP2	YDL208W	RDS1	P25611	832 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	RFT1	P38206	574 aa	Predicted RBP	0.89	□□□□□ -2.27
NHP2	YDL208W	SMC2	P38989	1170 aa	Known RBP	0.89	□□□□□ -2.27
NHP2	YDL208W	CAK1	P43568	368 aa	Predicted RBP	0.89	□□□□□ -2.27
NHP2	YDL208W	IRC6	P43615	237 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	TOM22	P49334	152 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	CUE3	P53137	624 aa	Known RBP	0.89	□□□□□ -2.27
NHP2	YDL208W	CDH1	P53197	566 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	SLT2	Q00772	484 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	PRP3	Q03338	469 aa	Predicted RBP	0.89	□□□□□ -2.27
NHP2	YDL208W	UBX2	Q04228	584 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	MYO5	Q04439	1219 aa	Known RBP	0.89	□□□□□ -2.27
NHP2	YDL208W	INM2	Q05533	292 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	NCB2	Q92317	146 aa		0.89	□□□□□ -2.27
NHP2	YDL208W	STT4	P37297	1900 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	TAO3	P40468	2376 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	MAK31	P23059	88 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	CLB3	P24870	427 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	RSA4	P25382	515 aa	Known RBP	0.88	□□□□□ -2.27
NHP2	YDL208W	RPL16A	P26784	199 aa	Known RBP	0.88	□□□□□ -2.27
NHP2	YDL208W	ICL1	P28240	557 aa	Predicted RBP	0.88	□□□□□ -2.27
NHP2	YDL208W	RPN12	P32496	274 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	PRX1	P34227	261 aa	Known RBP	0.88	□□□□□ -2.27
NHP2	YDL208W	BMH2	P34730	273 aa	Known RBP	0.88	□□□□□ -2.27
NHP2	YDL208W	MPE1	P35728	441 aa	Known RBP	0.88	□□□□□ -2.27
NHP2	YDL208W	OLA1	P38219	394 aa	Known RBP	0.88	□□□□□ -2.27
NHP2	YDL208W	RXT2	P38255	430 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	SHC1	P39000	512 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	PCL7	P40186	285 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	ATM1	P40416	690 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	EPL1	P43572	832 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	YPR063C	Q12160	140 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	RRI2	Q12348	645 aa		0.88	□□□□□ -2.27
NHP2	YDL208W	DDP1	Q99321	188 aa	Known RBP	0.88	□□□□□ -2.27
NHP2	YDL208W	RPL22A	P05749	121 aa	Known RBP	0.87	□□□□□ -2.27
NHP2	YDL208W	CDC21	P06785	304 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	BMH1	P29311	267 aa	Known RBP	0.87	□□□□□ -2.27
NHP2	YDL208W	PHO88	P38264	188 aa	Predicted RBP	0.87	□□□□□ -2.27
NHP2	YDL208W	STN1	P38960	494 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	SER3	P40054	469 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	ABM1	P47146	123 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	MDM1	Q01846	1127 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	ACL4	Q03771	387 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	TAF11	Q04226	346 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	FUS2	Q05670	677 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	PEX30	Q06169	523 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	SUE1	Q06524	206 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	YDL109C	Q12103	647 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	RRG1	Q12167	365 aa	Predicted RBP	0.87	□□□□□ -2.27
NHP2	YDL208W	MTR10	Q99189	972 aa		0.87	□□□□□ -2.27
NHP2	YDL208W	SLH1	P53327	1967 aa	Known RBP	0.87	□□□□□ -2.27
NHP2	YDL208W	DYN1	P36022	4092 aa		0.86	□□□□□ -2.27
NHP2	YDL208W	CYR1	P08678	2026 aa	Known RBP	0.86	□□□□□ -2.27
NHP2	YDL208W	CSF1	Q12150	2958 aa		0.86	□□□□□ -2.27
NHP2	YDL208W	TPK3	P05986	398 aa		0.86	□□□□□ -2.27
NHP2	YDL208W	THR4	P16120	514 aa	Known RBP	0.86	□□□□□ -2.27
NHP2	YDL208W	TPM1	P17536	199 aa	Known RBP	0.86	□□□□□ -2.27
NHP2	YDL208W	PHO13	P19881	312 aa		0.86	□□□□□ -2.27
NHP2	YDL208W	DAL81	P21657	970 aa		0.86	□□□□□ -2.27
NHP2	YDL208W	ERV1	P27882	189 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms