RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM8, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM8	YDL201W	POP5	P28005	173 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	DEP1	P31385	405 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	VAM7	P32912	316 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	VPS21	P36017	210 aa	Known RBP	4.37	□□□□□ -1.71
TRM8	YDL201W	ROT2	P38138	954 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	MIC12	P38341	106 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	STP2	P38704	541 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	DDI1	P40087	428 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	SYG1	P40528	902 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	PMT6	P42934	759 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	TRS85	P46944	698 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	LSM1	P47017	172 aa	Known RBP	4.37	□□□□□ -1.71
TRM8	YDL201W	AIM24	P47127	394 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	IBA57	P47158	497 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	UBP8	P50102	471 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	SEH1	P53011	349 aa	Known RBP	4.37	□□□□□ -1.71
TRM8	YDL201W	PKP2	P53170	491 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	OKP1	P53298	406 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	YIF1	P53845	314 aa	Known RBP	4.37	□□□□□ -1.71
TRM8	YDL201W	MRS2	Q01926	470 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	RNT1	Q02555	471 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	YML122C	Q03207	126 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	ECM11	Q04110	302 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	YDR387C	Q04162	555 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	NAT4	Q04751	285 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	THI7	Q05998	598 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	CSM4	Q08955	156 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	PER33	Q12144	273 aa		4.37	□□□□□ -1.71
TRM8	YDL201W	ATP6	P00854	259 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	YPT1	P01123	206 aa	Known RBP	4.36	□□□□□ -1.71
TRM8	YDL201W	HTB1	P02293	131 aa	Known RBP	4.36	□□□□□ -1.71
TRM8	YDL201W	HTB2	P02294	131 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	TEF1	P02994	458 aa	Known RBP	4.36	□□□□□ -1.71
TRM8	YDL201W	OPI3	P05375	206 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	RAD52	P06778	471 aa	Known RBP	4.36	□□□□□ -1.71
TRM8	YDL201W	QCR2	P07257	368 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	YMR31	P19955	123 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	KIN3	P22209	435 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	RNA15	P25299	296 aa	Predicted RBP	4.36	□□□□□ -1.71
TRM8	YDL201W	PPZ1	P26570	692 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	BMH1	P29311	267 aa	Known RBP	4.36	□□□□□ -1.71
TRM8	YDL201W	ITR2	P30606	609 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	NDC1	P32500	655 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	SSO1	P32867	290 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	MRPS5	P33759	307 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	LAG1	P38703	411 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	FRT2	P39734	528 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	ARG2	P40360	574 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	PCI8	P40512	444 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	TAD2	P47058	250 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	LYS20	P48570	428 aa	Known RBP	4.36	□□□□□ -1.71
TRM8	YDL201W	PMT5	P52867	743 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	SMM1	P53720	384 aa	Known RBP	4.36	□□□□□ -1.71
TRM8	YDL201W	SED5	Q01590	340 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	CTF19	Q02732	369 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	YPL077C	Q02831	240 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	HRD3	Q05787	833 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	CDD1	Q06549	142 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	NDE2	Q07500	545 aa		4.36	□□□□□ -1.71
TRM8	YDL201W	RIO1	Q12196	484 aa	Known RBP	4.36	□□□□□ -1.71
TRM8	YDL201W	ILV1	P00927	576 aa	Known RBP	4.35	□□□□□ -1.71
TRM8	YDL201W	TPK3	P05986	398 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	ATP1	P07251	545 aa	Known RBP	4.35	□□□□□ -1.71
TRM8	YDL201W	CHO1	P08456	276 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	POX1	P13711	748 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	DCC1	P25559	380 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	SPS19	P32573	292 aa	Known RBP	4.35	□□□□□ -1.71
TRM8	YDL201W	IES6	P32617	166 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	YBR056W	P38081	501 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	MRX3	P38172	270 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	SOP4	P39543	234 aa	Predicted RBP	4.35	□□□□□ -1.71
TRM8	YDL201W	CSM2	P40465	213 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	AZR1	P50080	613 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	NAS6	P50086	228 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	YPT32	P51996	222 aa	Known RBP	4.35	□□□□□ -1.71
TRM8	YDL201W	CWC23	P52868	283 aa	Predicted RBP	4.35	□□□□□ -1.71
TRM8	YDL201W	GPI15	P53961	229 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	YDR209C	Q03480	137 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	SGT1	Q08446	395 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	YPQ1	Q12010	308 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	YKL183C-A	Q3E765	70 aa		4.35	□□□□□ -1.71
TRM8	YDL201W	MYO1	P08964	1928 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	IMA3	P0CW40	589 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	IMA4	P0CW41	589 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	SEN2	P16658	377 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	NAM9	P27929	486 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	VPH2	P32341	215 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	SRP102	P36057	244 aa	Predicted RBP	4.34	□□□□□ -1.71
TRM8	YDL201W	DTR1	P38125	572 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	RIM2	P38127	377 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	FIG1	P38224	298 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	PRS2	P38620	318 aa	Known RBP	4.34	□□□□□ -1.71
TRM8	YDL201W	NPT1	P39683	429 aa	Known RBP	4.34	□□□□□ -1.71
TRM8	YDL201W	RBG1	P39729	369 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	ISC1	P40015	477 aa	Known RBP	4.34	□□□□□ -1.71
TRM8	YDL201W	FAU1	P40099	211 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	YNL194C	P40169	301 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	PRE6	P40303	254 aa	Known RBP	4.34	□□□□□ -1.71
TRM8	YDL201W	NDC80	P40460	691 aa		4.34	□□□□□ -1.71
TRM8	YDL201W	POG1	P40473	351 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms