RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C UFE1P41834 346 aa2.23□□□□□ -2.05
PBP4YDL053C NAS6P50086 228 aa2.23□□□□□ -2.05
PBP4YDL053C HST4P53688 370 aa2.23□□□□□ -2.05
PBP4YDL053C NRM1P53718 249 aa2.23□□□□□ -2.05
PBP4YDL053C PDR16P53860 351 aaKnown RBP2.23□□□□□ -2.05
PBP4YDL053C RGS2Q99188 309 aa2.23□□□□□ -2.05
PBP4YDL053C VPH1P32563 840 aaKnown RBP2.22□□□□□ -2.05
PBP4YDL053C YEL043WP32618 956 aa2.22□□□□□ -2.05
PBP4YDL053C AGA2P32781 87 aa2.22□□□□□ -2.05
PBP4YDL053C BLI1P35727 113 aa2.22□□□□□ -2.05
PBP4YDL053C MYO3P36006 1272 aa2.22□□□□□ -2.05
PBP4YDL053C MMS21P38632 267 aa2.22□□□□□ -2.05
PBP4YDL053C PRP39P39682 629 aaKnown RBP2.22□□□□□ -2.05
PBP4YDL053C RRB1Q04225 511 aaKnown RBP2.22□□□□□ -2.05
PBP4YDL053C FAR10Q06001 478 aa2.22□□□□□ -2.05
PBP4YDL053C YPR195CQ06594 109 aa2.22□□□□□ -2.05
PBP4YDL053C RFM1Q12192 310 aa2.22□□□□□ -2.05
PBP4YDL053C PSY3Q12318 242 aa2.22□□□□□ -2.05
PBP4YDL053C SAL1D6W196 494 aa2.21□□□□□ -2.06
PBP4YDL053C VPS63O13549 108 aa2.21□□□□□ -2.06
PBP4YDL053C COX10P21592 462 aa2.21□□□□□ -2.06
PBP4YDL053C DCC1P25559 380 aa2.21□□□□□ -2.06
PBP4YDL053C SKG6P32900 734 aaPredicted RBP2.21□□□□□ -2.06
PBP4YDL053C BDH1P39714 382 aa2.21□□□□□ -2.06
PBP4YDL053C YIR035CP40579 254 aa2.21□□□□□ -2.06
PBP4YDL053C TPC1P53257 314 aa2.21□□□□□ -2.06
PBP4YDL053C INP2Q03824 705 aa2.21□□□□□ -2.06
PBP4YDL053C BI3Q9ZZW7 517 aa2.21□□□□□ -2.06
PBP4YDL053C SPT7P35177 1332 aa2.2□□□□□ -2.06
PBP4YDL053C CKA2P19454 339 aa2.2□□□□□ -2.06
PBP4YDL053C SLX1P38324 304 aa2.2□□□□□ -2.06
PBP4YDL053C BTT1P40314 149 aaPredicted RBP2.2□□□□□ -2.06
PBP4YDL053C HIT1P46973 164 aa2.2□□□□□ -2.06
PBP4YDL053C CPR7P47103 393 aa2.2□□□□□ -2.06
PBP4YDL053C YGL114WP53134 725 aa2.2□□□□□ -2.06
PBP4YDL053C ZRG17P53735 605 aa2.2□□□□□ -2.06
PBP4YDL053C YNL146WP53906 100 aa2.2□□□□□ -2.06
PBP4YDL053C UTP15Q04305 513 aaKnown RBP2.2□□□□□ -2.06
PBP4YDL053C APC4Q04601 652 aa2.2□□□□□ -2.06
PBP4YDL053C SPH1Q06160 661 aa2.2□□□□□ -2.06
PBP4YDL053C YDL211CQ12121 372 aa2.2□□□□□ -2.06
PBP4YDL053C MHP1P43638 1398 aa2.2□□□□□ -2.06
PBP4YDL053C SMI1P32566 505 aa2.19□□□□□ -2.06
PBP4YDL053C CBF5P33322 483 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
PBP4YDL053C AST1P35183 429 aa2.19□□□□□ -2.06
PBP4YDL053C SMF2P38778 549 aa2.19□□□□□ -2.06
PBP4YDL053C RRG9P40156 214 aa2.19□□□□□ -2.06
PBP4YDL053C YIL089WP40500 205 aa2.19□□□□□ -2.06
PBP4YDL053C HCH1P53834 153 aa2.19□□□□□ -2.06
PBP4YDL053C INP1Q03694 420 aa2.19□□□□□ -2.06
PBP4YDL053C YMR244WQ04018 355 aa2.19□□□□□ -2.06
PBP4YDL053C REP1P03871 373 aa2.18□□□□□ -2.06
PBP4YDL053C UIP5P36137 443 aa2.18□□□□□ -2.06
PBP4YDL053C YMR262WP38430 313 aa2.18□□□□□ -2.06
PBP4YDL053C LIN1P38852 340 aaPredicted RBP2.18□□□□□ -2.06
PBP4YDL053C NAS2P40555 220 aa2.18□□□□□ -2.06
PBP4YDL053C PXR1P53335 271 aaPredicted RBP2.18□□□□□ -2.06
PBP4YDL053C ECM19Q06011 112 aa2.18□□□□□ -2.06
PBP4YDL053C DFM1Q12743 341 aaKnown RBP2.18□□□□□ -2.06
PBP4YDL053C SPS100P13130 326 aa2.17□□□□□ -2.06
PBP4YDL053C CTA1P15202 515 aa2.17□□□□□ -2.06
PBP4YDL053C RBK1P25332 333 aa2.17□□□□□ -2.06
PBP4YDL053C RPB9P27999 122 aa2.17□□□□□ -2.06
PBP4YDL053C ZRT3P34240 503 aa2.17□□□□□ -2.06
PBP4YDL053C KTI12P34253 313 aaKnown RBP2.17□□□□□ -2.06
PBP4YDL053C RFT1P38206 574 aaPredicted RBP2.17□□□□□ -2.06
PBP4YDL053C RCK1P38622 512 aa2.17□□□□□ -2.06
PBP4YDL053C COS4P43542 379 aa2.17□□□□□ -2.06
PBP4YDL053C TAF6P53040 516 aa2.17□□□□□ -2.06
PBP4YDL053C FMP48P53233 369 aa2.17□□□□□ -2.06
PBP4YDL053C SMD1Q02260 146 aaPredicted RBP2.17□□□□□ -2.06
PBP4YDL053C GMC1Q04399 608 aa2.17□□□□□ -2.06
PBP4YDL053C YDR262WQ12331 272 aa2.17□□□□□ -2.06
PBP4YDL053C RNR2P09938 399 aaKnown RBP2.16□□□□□ -2.06
PBP4YDL053C CPT1P17898 393 aa2.16□□□□□ -2.06
PBP4YDL053C IME2P32581 645 aa2.16□□□□□ -2.06
PBP4YDL053C YIL059CP40520 121 aa2.16□□□□□ -2.06
PBP4YDL053C SHE4P51534 789 aa2.16□□□□□ -2.06
PBP4YDL053C SDS23P53172 527 aa2.16□□□□□ -2.06
PBP4YDL053C YGR016WP53209 190 aa2.16□□□□□ -2.06
PBP4YDL053C RVB1Q03940 463 aaKnown RBP2.16□□□□□ -2.06
PBP4YDL053C VTI1Q04338 217 aa2.16□□□□□ -2.06
PBP4YDL053C YDR286CQ05530 114 aa2.16□□□□□ -2.06
PBP4YDL053C BUR2Q05949 395 aa2.16□□□□□ -2.06
PBP4YDL053C MRX9Q07349 420 aaKnown RBP2.16□□□□□ -2.06
PBP4YDL053C MIM1Q08176 113 aa2.16□□□□□ -2.06
PBP4YDL053C RDL2Q08742 149 aaKnown RBP2.16□□□□□ -2.06
PBP4YDL053C CUP2P15315 225 aa2.15□□□□□ -2.07
PBP4YDL053C VMA5P31412 392 aaKnown RBP2.15□□□□□ -2.07
PBP4YDL053C MEI5P32489 222 aa2.15□□□□□ -2.07
PBP4YDL053C SRB2P34162 210 aa2.15□□□□□ -2.07
PBP4YDL053C YKL187CP34231 750 aa2.15□□□□□ -2.07
PBP4YDL053C DSE1P40077 573 aa2.15□□□□□ -2.07
PBP4YDL053C FYV8P46949 817 aaKnown RBP2.15□□□□□ -2.07
PBP4YDL053C PMT4P46971 762 aa2.15□□□□□ -2.07
PBP4YDL053C DIB1Q06819 143 aaPredicted RBP2.15□□□□□ -2.07
PBP4YDL053C APC2Q12440 853 aa2.15□□□□□ -2.07
PBP4YDL053C PRM4Q12498 284 aa2.15□□□□□ -2.07
PBP4YDL053C GAL3P13045 520 aa2.14□□□□□ -2.07
PBP4YDL053C ITR2P30606 609 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms