RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C PRB1P09232 635 aa3.77□□□□□ -1.81
NPL4YBR170C CPR4P25334 318 aa3.77□□□□□ -1.81
NPL4YBR170C SUA5P32579 426 aa3.77□□□□□ -1.81
NPL4YBR170C RCK2P38623 610 aa3.77□□□□□ -1.81
NPL4YBR170C RTR1P40084 226 aaPredicted RBP3.77□□□□□ -1.81
NPL4YBR170C SHQ1P40486 507 aaPredicted RBP3.77□□□□□ -1.81
NPL4YBR170C IDP2P41939 412 aa3.77□□□□□ -1.81
NPL4YBR170C HCH1P53834 153 aa3.77□□□□□ -1.81
NPL4YBR170C TRM82Q03774 444 aa3.77□□□□□ -1.81
NPL4YBR170C CFT1Q06632 1357 aaKnown RBP3.77□□□□□ -1.81
NPL4YBR170C YLR012CQ07927 99 aa3.77□□□□□ -1.81
NPL4YBR170C ESA1Q08649 445 aa3.77□□□□□ -1.81
NPL4YBR170C YDL109CQ12103 647 aa3.77□□□□□ -1.81
NPL4YBR170C CHD1P32657 1468 aa3.76□□□□□ -1.81
NPL4YBR170C HEM4P06174 275 aa3.76□□□□□ -1.81
NPL4YBR170C RPL31AP0C2H8 113 aaKnown RBP3.76□□□□□ -1.81
NPL4YBR170C RRT12P25381 491 aa3.76□□□□□ -1.81
NPL4YBR170C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
NPL4YBR170C TCD1P38756 429 aa3.76□□□□□ -1.81
NPL4YBR170C YIL067CP40514 678 aa3.76□□□□□ -1.81
NPL4YBR170C YPL077CQ02831 240 aa3.76□□□□□ -1.81
NPL4YBR170C ASR1Q06834 288 aa3.76□□□□□ -1.81
NPL4YBR170C FRE8Q12209 686 aa3.76□□□□□ -1.81
NPL4YBR170C YDL199CQ12407 687 aa3.76□□□□□ -1.81
NPL4YBR170C ADF1Q2V2Q1 113 aa3.76□□□□□ -1.81
NPL4YBR170C YCL021W-AQ96VH3 125 aa3.76□□□□□ -1.81
NPL4YBR170C REP1P03871 373 aa3.75□□□□□ -1.81
NPL4YBR170C ARG80P07249 177 aa3.75□□□□□ -1.81
NPL4YBR170C RPL23AP0CX41 137 aaKnown RBP3.75□□□□□ -1.81
NPL4YBR170C RPL23BP0CX42 137 aaKnown RBP3.75□□□□□ -1.81
NPL4YBR170C PRO3P32263 286 aaKnown RBP3.75□□□□□ -1.81
NPL4YBR170C COA1P40452 197 aa3.75□□□□□ -1.81
NPL4YBR170C HAC1P41546 238 aa3.75□□□□□ -1.81
NPL4YBR170C PMT4P46971 762 aa3.75□□□□□ -1.81
NPL4YBR170C YJR085CP47131 105 aaKnown RBP3.75□□□□□ -1.81
NPL4YBR170C MTQ1P53944 314 aa3.75□□□□□ -1.81
NPL4YBR170C INP2Q03824 705 aa3.75□□□□□ -1.81
NPL4YBR170C SNX41Q04053 625 aa3.75□□□□□ -1.81
NPL4YBR170C RTN1Q04947 295 aaKnown RBP3.75□□□□□ -1.81
NPL4YBR170C YOR029WQ12243 111 aa3.75□□□□□ -1.81
NPL4YBR170C RPS18AP0CX55 146 aaKnown RBP3.75□□□□□ -1.81
NPL4YBR170C RPS18BP0CX56 146 aaPredicted RBP3.75□□□□□ -1.81
NPL4YBR170C YCR016WP25617 290 aaKnown RBP3.75□□□□□ -1.81
NPL4YBR170C BMH2P34730 273 aaKnown RBP3.75□□□□□ -1.81
NPL4YBR170C BIG1P38813 335 aa3.75□□□□□ -1.81
NPL4YBR170C MSS2P40990 351 aa3.75□□□□□ -1.81
NPL4YBR170C MST27P53176 234 aa3.75□□□□□ -1.81
NPL4YBR170C REX2P54964 269 aaKnown RBP3.75□□□□□ -1.81
NPL4YBR170C RDL2Q08742 149 aaKnown RBP3.75□□□□□ -1.81
NPL4YBR170C YOR387CQ08910 206 aa3.75□□□□□ -1.81
NPL4YBR170C IZH4Q99393 312 aa3.75□□□□□ -1.81
NPL4YBR170C MSI1P13712 422 aa3.74□□□□□ -1.81
NPL4YBR170C MET16P18408 261 aaPredicted RBP3.74□□□□□ -1.81
NPL4YBR170C YKL063CP35725 167 aa3.74□□□□□ -1.81
NPL4YBR170C RPC37P36121 282 aa3.74□□□□□ -1.81
NPL4YBR170C TDA11P38854 504 aa3.74□□□□□ -1.81
NPL4YBR170C TIS11P47977 285 aa3.74□□□□□ -1.81
NPL4YBR170C CWC25P53854 179 aaKnown RBP3.74□□□□□ -1.81
NPL4YBR170C SUR7P54003 302 aa3.74□□□□□ -1.81
NPL4YBR170C YMR010WQ03687 405 aa3.74□□□□□ -1.81
NPL4YBR170C ADH6Q04894 360 aaKnown RBP3.74□□□□□ -1.81
NPL4YBR170C TSR1Q07381 788 aaKnown RBP3.74□□□□□ -1.81
NPL4YBR170C SDO1Q07953 250 aaKnown RBP3.74□□□□□ -1.81
NPL4YBR170C YER078W-AQ3E7A2 54 aa3.74□□□□□ -1.81
NPL4YBR170C RPS8AP0CX39 200 aaKnown RBP3.73□□□□□ -1.81
NPL4YBR170C RPS8BP0CX40 200 aaKnown RBP3.73□□□□□ -1.81
NPL4YBR170C VPS1P21576 704 aaKnown RBP3.73□□□□□ -1.81
NPL4YBR170C DAL82P21705 255 aa3.73□□□□□ -1.81
NPL4YBR170C VPS3P23643 1011 aa3.73□□□□□ -1.81
NPL4YBR170C PRR1P28708 518 aa3.73□□□□□ -1.81
NPL4YBR170C PMT2P31382 759 aa3.73□□□□□ -1.81
NPL4YBR170C KRE6P32486 720 aa3.73□□□□□ -1.81
NPL4YBR170C SDH3P33421 198 aa3.73□□□□□ -1.81
NPL4YBR170C PRS4P38063 326 aaPredicted RBP3.73□□□□□ -1.81
NPL4YBR170C GDS1P41913 522 aa3.73□□□□□ -1.81
NPL4YBR170C OTU1P43558 301 aa3.73□□□□□ -1.81
NPL4YBR170C SHY1P53266 389 aa3.73□□□□□ -1.81
NPL4YBR170C YHC1Q05900 231 aaKnown RBP3.73□□□□□ -1.81
NPL4YBR170C RIF2Q06208 395 aa3.73□□□□□ -1.81
NPL4YBR170C TAF10Q12030 206 aa3.73□□□□□ -1.81
NPL4YBR170C POM33Q12164 279 aa3.73□□□□□ -1.81
NPL4YBR170C YBL111CQ3E7Y5 667 aa3.73□□□□□ -1.81
NPL4YBR170C SPS100P13130 326 aa3.73□□□□□ -1.81
NPL4YBR170C MCH2P36032 473 aa3.73□□□□□ -1.81
NPL4YBR170C YKL071WP36086 256 aa3.73□□□□□ -1.81
NPL4YBR170C ALG11P53954 548 aaKnown RBP3.73□□□□□ -1.81
NPL4YBR170C VBA1Q04301 562 aa3.73□□□□□ -1.81
NPL4YBR170C YLR283WQ05867 314 aa3.73□□□□□ -1.81
NPL4YBR170C GRS2Q06817 618 aa3.73□□□□□ -1.81
NPL4YBR170C PAM18Q07914 168 aa3.73□□□□□ -1.81
NPL4YBR170C UTP23Q12339 254 aaKnown RBP3.73□□□□□ -1.81
NPL4YBR170C SAC3P46674 1301 aa3.72□□□□□ -1.81
NPL4YBR170C ILV1P00927 576 aaKnown RBP3.72□□□□□ -1.81
NPL4YBR170C NAM2P11325 894 aa3.72□□□□□ -1.81
NPL4YBR170C RPB5P20434 215 aa3.72□□□□□ -1.81
NPL4YBR170C MIR1P23641 311 aaKnown RBP3.72□□□□□ -1.81
NPL4YBR170C RPL16BP26785 198 aaKnown RBP3.72□□□□□ -1.81
NPL4YBR170C ZIP1P31111 875 aa3.72□□□□□ -1.81
NPL4YBR170C NUP2P32499 720 aa3.72□□□□□ -1.81
NPL4YBR170C CYM1P32898 989 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 71.9 ms