RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 RNF14Q9UBS8 474 aa9.07□□□□□ -0.96
PNKP-231ENST00000640501 SEPT9Q9UHD8 586 aaPredicted RBP9.07□□□□□ -0.96
PNKP-231ENST00000640501 KIAA1217Q5T5P2 1943 aa9.07□□□□□ -0.96
PNKP-231ENST00000640501 BTNL10A8MVZ5 291 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 IRF6O14896 467 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 ZBTB39O15060 712 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 PMM2O15305 246 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 GAS2O43903 313 aaKnown RBP9.06□□□□□ -0.96
PNKP-231ENST00000640501 GRIN3BO60391 1043 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 ATP9AO75110 1047 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 CCNE2O96020 404 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 GTF2H1P32780 548 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 PRKCIP41743 596 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 PAFAH1B1P43034 410 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 VAMP7P51809 220 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 POLGP54098 1239 aaPredicted RBP9.06□□□□□ -0.96
PNKP-231ENST00000640501 PRKCEQ02156 737 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 MAPK7Q13164 816 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 GPS2Q13227 327 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 SNAPC2Q13487 334 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 BMS1Q14692 1282 aaKnown RBP9.06□□□□□ -0.96
PNKP-231ENST00000640501 ERCC6LQ2NKX8 1250 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 BRDTQ58F21 947 aaPredicted RBP9.06□□□□□ -0.96
PNKP-231ENST00000640501 TEX35Q5T0J7 233 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 CCDC181Q5TID7 509 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 PAPD7Q5XG87 772 aaKnown RBP9.06□□□□□ -0.96
PNKP-231ENST00000640501 SLFN12LQ6IEE8 588 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 SWSAP1Q6NVH7 229 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 MAEAQ7L5Y9 396 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 MAP4K3Q8IVH8 894 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 SYCE1Q8N0S2 351 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 CDCA5Q96FF9 252 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 OTUD5Q96G74 571 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 PURBQ96QR8 312 aaKnown RBP9.06□□□□□ -0.96
PNKP-231ENST00000640501 FIZ1Q96SL8 496 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 CRACR2AQ9BSW2 395 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 SYT17Q9BSW7 474 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 GANQ9H2C0 597 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 ELP3Q9H9T3 547 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 CYP26B1Q9NR63 512 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 APEX2Q9UBZ4 518 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 INTUQ9ULD6 942 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 TBX20Q9UMR3 447 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 KCNH4Q9UQ05 1017 aa9.06□□□□□ -0.96
PNKP-231ENST00000640501 REXO2Q9Y3B8 237 aaKnown RBP9.06□□□□□ -0.96
PNKP-231ENST00000640501 POLR2AP24928 1970 aaKnown RBP9.06□□□□□ -0.96
PNKP-231ENST00000640501 MYH9P35579 1960 aaKnown RBP9.05□□□□□ -0.96
PNKP-231ENST00000640501 MACROD2A1Z1Q3 448 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 DENND3A2RUS2 1198 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 ADM5C9JUS6 153 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 NOL4O94818 638 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 LDHAP00338 332 aaKnown RBP9.05□□□□□ -0.96
PNKP-231ENST00000640501 OATP04181 439 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 ERCC3P19447 782 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 GARTP22102 1010 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 CASP4P49662 377 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 SLC26A2P50443 739 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 BRD3Q15059 726 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 NAB2Q15742 525 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 CLUL1Q15846 466 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 MAP9Q49MG5 647 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 UTP14CQ5TAP6 766 aaKnown RBP9.05□□□□□ -0.96
PNKP-231ENST00000640501 HGSNATQ68CP4 663 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 ABHD15Q6UXT9 468 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 ANO5Q75V66 913 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 DAW1Q8N136 415 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 ZNF710Q8N1W2 664 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 FAM133AQ8N9E0 248 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 SHCBP1Q8NEM2 672 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 TCP11Q8WWU5 503 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 RUBCNQ92622 972 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 BICD1Q96G01 975 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 BORCS6Q96GS4 357 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 WNK4Q96J92 1243 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 PAGR1Q9BTK6 254 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 ASCC2Q9H1I8 757 aaPredicted RBP9.05□□□□□ -0.96
PNKP-231ENST00000640501 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 MLXIPQ9HAP2 919 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 HSPBP1Q9NZL4 362 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 HYOU1Q9Y4L1 999 aa9.05□□□□□ -0.96
PNKP-231ENST00000640501 WDR81Q562E7 1941 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 CCDC151A5D8V7 595 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 ASB14A6NK59 587 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 NOP56O00567 594 aaKnown RBP9.04□□□□□ -0.96
PNKP-231ENST00000640501 HNRNPDLO14979 420 aaKnown RBP9.04□□□□□ -0.96
PNKP-231ENST00000640501 EPHB6O15197 1021 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 SLC16A4O15374 487 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 ATG7O95352 703 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 SLC9A1P19634 815 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 EDNRBP24530 442 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 SOX5P35711 763 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 NAMPTP43490 491 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 NPTX2P47972 431 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 LIG4P49917 911 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 MXI1P50539 228 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 FKBP1BP68106 108 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 CYP27A1Q02318 531 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 ARID5AQ03989 594 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 ITIH3Q06033 890 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 GFPT1Q06210 699 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms