RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 RNPC3Q96LT9 517 aaKnown RBP22.54■■□□□ 1.2
PNKP-211ENST00000598020 NLRP4Q96MN2 994 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 SCLT1Q96NL6 688 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 FTHL17Q9BXU8 183 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 NFKBIZQ9BYH8 718 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 GPRC5CQ9NQ84 441 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 FAM13BQ9NYF5 915 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 MICAL3Q7RTP6 2002 aa22.53■■□□□ 1.2
PNKP-211ENST00000598020 RANBP2P49792 3224 aaKnown RBP22.53■■□□□ 1.2
PNKP-211ENST00000598020 SSBP05455 408 aaKnown RBP eCLIP22.53■■□□□ 1.2
PNKP-211ENST00000598020 PTENP60484 403 aa22.53■■□□□ 1.2
PNKP-211ENST00000598020 MCM6Q14566 821 aa22.53■■□□□ 1.2
PNKP-211ENST00000598020 ARSHQ5FYA8 562 aa22.53■■□□□ 1.2
PNKP-211ENST00000598020 MAEAQ7L5Y9 396 aa22.53■■□□□ 1.2
PNKP-211ENST00000598020 FAM228AQ86W67 206 aa22.53■■□□□ 1.2
PNKP-211ENST00000598020 RNF149Q8NC42 400 aa22.53■■□□□ 1.2
PNKP-211ENST00000598020 ZNF668Q96K58 619 aaPredicted RBP22.53■■□□□ 1.2
PNKP-211ENST00000598020 CXXC1Q9P0U4 656 aaPredicted RBP22.53■■□□□ 1.2
PNKP-211ENST00000598020 ST3GAL5Q9UNP4 418 aa22.53■■□□□ 1.2
PNKP-211ENST00000598020 FAM237AA0A1B0GTK4 181 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 A0A1W2PQ27 194 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 A0A1W2PQ64 194 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 A0A1W2PQD8 194 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 SRGAP2CP0DJJ0 459 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 STAT6P42226 847 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 MAPK7Q13164 816 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 CAPSQ13938 189 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 PCBP1Q15365 356 aaKnown RBP eCLIP22.52■■□□□ 1.2
PNKP-211ENST00000598020 E2F4Q16254 413 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 DAW1Q8N136 415 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 DRC1Q96MC2 740 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 PYM1Q9BRP8 204 aaKnown RBP22.52■■□□□ 1.2
PNKP-211ENST00000598020 PANK2Q9BZ23 570 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 CUEDC2Q9H467 287 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 C17orf75Q9HAS0 396 aa22.52■■□□□ 1.2
PNKP-211ENST00000598020 HIP1RO75146 1068 aa22.51■■□□□ 1.19
PNKP-211ENST00000598020 PHKA2P46019 1235 aa22.51■■□□□ 1.19
PNKP-211ENST00000598020 PPP2R5AQ15172 486 aa22.51■■□□□ 1.19
PNKP-211ENST00000598020 LRIT3Q3SXY7 679 aa22.51■■□□□ 1.19
PNKP-211ENST00000598020 GPBP1Q86WP2 473 aa22.51■■□□□ 1.19
PNKP-211ENST00000598020 IQUBQ8NA54 791 aa22.51■■□□□ 1.19
PNKP-211ENST00000598020 PHOSPHO2Q8TCD6 241 aa22.51■■□□□ 1.19
PNKP-211ENST00000598020 TMX1Q9H3N1 280 aa22.51■■□□□ 1.19
PNKP-211ENST00000598020 GDPD2Q9HCC8 539 aa22.51■■□□□ 1.19
PNKP-211ENST00000598020 SFPQP23246 707 aaKnown RBP eCLIP22.5■■□□□ 1.19
PNKP-211ENST00000598020 NAMPTP43490 491 aa22.5■■□□□ 1.19
PNKP-211ENST00000598020 WDR5P61964 334 aaKnown RBP22.5■■□□□ 1.19
PNKP-211ENST00000598020 NFX1Q12986 1120 aaKnown RBP22.5■■□□□ 1.19
PNKP-211ENST00000598020 CDCA2Q69YH5 1023 aaPredicted RBP22.5■■□□□ 1.19
PNKP-211ENST00000598020 SV2BQ7L1I2 683 aa22.5■■□□□ 1.19
PNKP-211ENST00000598020 PDILTQ8N807 584 aa22.5■■□□□ 1.19
PNKP-211ENST00000598020 BSNDQ8WZ55 320 aa22.5■■□□□ 1.19
PNKP-211ENST00000598020 IFT74Q96LB3 600 aa22.5■■□□□ 1.19
PNKP-211ENST00000598020 KCNG1Q9UIX4 513 aa22.5■■□□□ 1.19
PNKP-211ENST00000598020 KCNH3Q9ULD8 1083 aa22.5■■□□□ 1.19
PNKP-211ENST00000598020 ODF2LQ9ULJ1 636 aa22.5■■□□□ 1.19
PNKP-211ENST00000598020 HPSEQ9Y251 543 aa22.5■■□□□ 1.19
PNKP-211ENST00000598020 SLC4A7Q9Y6M7 1214 aa22.5■■□□□ 1.19
PNKP-211ENST00000598020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.49■■□□□ 1.19
PNKP-211ENST00000598020 SLC9A7Q96T83 725 aa22.49■■□□□ 1.19
PNKP-211ENST00000598020 TSPYL2Q9H2G4 693 aaPredicted RBP22.49■■□□□ 1.19
PNKP-211ENST00000598020 MINDY3Q9H8M7 445 aa22.49■■□□□ 1.19
PNKP-211ENST00000598020 MYH11P35749 1972 aa22.49■■□□□ 1.19
PNKP-211ENST00000598020 TTC3P53804 2025 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 ZBBXA8MT70 800 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 ENPP3O14638 875 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 POLR2DO15514 142 aaKnown RBP22.48■■□□□ 1.19
PNKP-211ENST00000598020 KCNJ6P48051 423 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 GIT2Q14161 759 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 DHX8Q14562 1220 aaKnown RBP22.48■■□□□ 1.19
PNKP-211ENST00000598020 DSC3Q14574 896 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 RTN4RL1Q86UN2 441 aaPredicted RBP22.48■■□□□ 1.19
PNKP-211ENST00000598020 NTPCRQ9BSD7 190 aaKnown RBP22.48■■□□□ 1.19
PNKP-211ENST00000598020 C2orf40Q9H1Z8 148 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 TNMDQ9H2S6 317 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 MAGEF1Q9HAY2 307 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 POLD4Q9HCU8 107 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 CHST12Q9NRB3 414 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 KBTBD4Q9NVX7 518 aa22.48■■□□□ 1.19
PNKP-211ENST00000598020 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.47■■□□□ 1.19
PNKP-211ENST00000598020 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.47■■□□□ 1.19
PNKP-211ENST00000598020 LRRIQ4A6NIV6 560 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 RBAK-RBAKDNI3L0D1 243 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 CSDE1O75534 798 aaKnown RBP22.47■■□□□ 1.19
PNKP-211ENST00000598020 PFKFB1P16118 471 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 ZNF131P52739 623 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 MBTD1Q05BQ5 628 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 CSPP1Q1MSJ5 1256 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 SPIRE2Q8WWL2 714 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 LINC01599Q8WXQ3 324 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 DHX58Q96C10 678 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 REEP2Q9BRK0 252 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 LRRC27Q9C0I9 530 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 USP25Q9UHP3 1055 aa22.47■■□□□ 1.19
PNKP-211ENST00000598020 NPHP3-ACAD11A0A0J9YXS1 232 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 A0A1B0GVL5 298 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 MYMKA6NI61 221 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 AMHP03971 560 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 PLS3P13797 630 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 NPTX2P47972 431 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms