RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.03□□□□□ -0.32
SYMPK-207ENST00000596824 GAS2O43903 313 aaKnown RBP13.03□□□□□ -0.32
SYMPK-207ENST00000596824 ST18O60284 1047 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 CD2BP2O95400 341 aaKnown RBP13.03□□□□□ -0.32
SYMPK-207ENST00000596824 ITGB1P05556 798 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 SFPQP23246 707 aaKnown RBP eCLIP13.03□□□□□ -0.32
SYMPK-207ENST00000596824 ORC2Q13416 577 aaPredicted RBP13.03□□□□□ -0.32
SYMPK-207ENST00000596824 CAMK1Q14012 370 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 COL19A1Q14993 1142 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 ZNF598Q86UK7 904 aaKnown RBP13.03□□□□□ -0.32
SYMPK-207ENST00000596824 NOSTRINQ8IVI9 506 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 KLHL23Q8NBE8 558 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 IL27Q8NEV9 243 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 TMEM143Q96AN5 459 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 NLRP4Q96MN2 994 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 CWH43Q9H720 699 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 UPF2Q9HAU5 1272 aaKnown RBP13.03□□□□□ -0.32
SYMPK-207ENST00000596824 IFT122Q9HBG6 1241 aa13.03□□□□□ -0.32
SYMPK-207ENST00000596824 ALG13Q9NP73 1137 aaKnown RBP13.03□□□□□ -0.32
SYMPK-207ENST00000596824 PDCD11Q14690 1871 aaKnown RBP13.02□□□□□ -0.32
SYMPK-207ENST00000596824 A0A0U1RQF3 1178 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 HOXA2O43364 376 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 OR52Z1P0C646 297 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 ATF7P17544 494 aaPredicted RBP13.02□□□□□ -0.33
SYMPK-207ENST00000596824 DNAJB1P25685 340 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 U2AF2P26368 475 aaKnown RBP eCLIP13.02□□□□□ -0.33
SYMPK-207ENST00000596824 ZNF174Q15697 407 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 CLLU1OSQ5K130 101 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 TTC38Q5R3I4 469 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 FERMT3Q86UX7 667 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 SPPL3Q8TCT6 385 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 TCP11Q8WWU5 503 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 PRPF31Q8WWY3 499 aaKnown RBP13.02□□□□□ -0.33
SYMPK-207ENST00000596824 PSPC1Q8WXF1 523 aaKnown RBP13.02□□□□□ -0.33
SYMPK-207ENST00000596824 TMX3Q96JJ7 454 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 TBC1D32Q96NH3 1257 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 CASD1Q96PB1 797 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 MTRQ99707 1265 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 INO80BQ9C086 356 aaPredicted RBP13.02□□□□□ -0.33
SYMPK-207ENST00000596824 TMEM117Q9H0C3 514 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 XPNPEP1Q9NQW7 623 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 CHST12Q9NRB3 414 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 ANKEF1Q9NU02 776 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 TYW1Q9NV66 732 aaKnown RBP13.02□□□□□ -0.33
SYMPK-207ENST00000596824 DACT1Q9NYF0 836 aa13.02□□□□□ -0.33
SYMPK-207ENST00000596824 TNFRSF10AO00220 468 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 EOMESO95936 686 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 SPATA31C1P0DKV0 1188 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 TRAPPC10P48553 1259 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 LAMTOR4Q0VGL1 99 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 GNL2Q13823 731 aaKnown RBP13.01□□□□□ -0.33
SYMPK-207ENST00000596824 LEXMQ3ZCV2 418 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 SPOUT1Q5T280 376 aaKnown RBP13.01□□□□□ -0.33
SYMPK-207ENST00000596824 LRRC55Q6ZSA7 311 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 CATSPER4Q7RTX7 472 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 LRRC43Q8N309 656 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 COLGALT1Q8NBJ5 622 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 PABPC5Q96DU9 382 aaKnown RBP13.01□□□□□ -0.33
SYMPK-207ENST00000596824 NECAB3Q96P71 396 aaPredicted RBP13.01□□□□□ -0.33
SYMPK-207ENST00000596824 UHRF1Q96T88 793 aaPredicted RBP13.01□□□□□ -0.33
SYMPK-207ENST00000596824 TRAIPQ9BWF2 469 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 MINDY3Q9H8M7 445 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 AGPAT5Q9NUQ2 364 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 PIN4Q9Y237 131 aaKnown RBP13.01□□□□□ -0.33
SYMPK-207ENST00000596824 PCDHB12Q9Y5F1 795 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 CITO14578 2027 aa13.01□□□□□ -0.33
SYMPK-207ENST00000596824 MTCL1Q9Y4B5 1905 aaKnown RBP13□□□□□ -0.33
SYMPK-207ENST00000596824 PLXNA3P51805 1871 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 ASAP2O43150 1006 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 MED24O75448 989 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 DGAT1O75907 488 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 CSPG5O95196 566 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 SRGAP2CP0DJJ0 459 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 LAG3P18627 525 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 KCNA5P22460 613 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 TECP42680 631 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 PHKA2P46019 1235 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 RARRES1P49788 294 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 HYAL1Q12794 435 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 NBR1Q14596 966 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 TWF2Q6IBS0 349 aaKnown RBP13□□□□□ -0.33
SYMPK-207ENST00000596824 SRGAP1Q7Z6B7 1085 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 CATSPER3Q86XQ3 398 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 ABI1Q8IZP0 508 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 C4orf32Q8N8J7 132 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 RNF169Q8NCN4 708 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 POF1BQ8WVV4 589 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 TUFT1Q9NNX1 390 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 AAASQ9NRG9 546 aa13□□□□□ -0.33
SYMPK-207ENST00000596824 NOL7Q9UMY1 257 aaKnown RBP13□□□□□ -0.33
SYMPK-207ENST00000596824 A0A087WWV3 80 aa12.99□□□□□ -0.33
SYMPK-207ENST00000596824 FGF18O76093 207 aa12.99□□□□□ -0.33
SYMPK-207ENST00000596824 XRCC6P12956 609 aaKnown RBP eCLIP12.99□□□□□ -0.33
SYMPK-207ENST00000596824 IRS1P35568 1242 aa12.99□□□□□ -0.33
SYMPK-207ENST00000596824 TOB1P50616 345 aaPredicted RBP12.99□□□□□ -0.33
SYMPK-207ENST00000596824 RAB27AP51159 221 aa12.99□□□□□ -0.33
SYMPK-207ENST00000596824 UBE3AQ05086 875 aa12.99□□□□□ -0.33
SYMPK-207ENST00000596824 MXD4Q14582 209 aaPredicted RBP12.99□□□□□ -0.33
SYMPK-207ENST00000596824 CSPP1Q1MSJ5 1256 aa12.99□□□□□ -0.33
SYMPK-207ENST00000596824 CTC1Q2NKJ3 1217 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms