RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 MTG1Q9BT17 334 aaPredicted RBP9.49□□□□□ -0.89
FARP1-220ENST00000596613 LSG1Q9H089 658 aaKnown RBP9.49□□□□□ -0.89
FARP1-220ENST00000596613 RIOX1Q9H6W3 641 aa9.49□□□□□ -0.89
FARP1-220ENST00000596613 ABCB6Q9NP58 842 aa9.49□□□□□ -0.89
FARP1-220ENST00000596613 PDGFCQ9NRA1 345 aa9.49□□□□□ -0.89
FARP1-220ENST00000596613 RBM28Q9NW13 759 aaKnown RBP9.49□□□□□ -0.89
FARP1-220ENST00000596613 PPP4R2Q9NY27 417 aa9.49□□□□□ -0.89
FARP1-220ENST00000596613 HTTP42858 3142 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.48□□□□□ -0.89
FARP1-220ENST00000596613 KRBA1A5PL33 1030 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 PDE2AO00408 941 aaPredicted RBP9.48□□□□□ -0.89
FARP1-220ENST00000596613 KIAA0355O15063 1070 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 STAM2O75886 525 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 USP17L7P0C7H9 530 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 ALAS2P22557 587 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 CCND2P30279 289 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 CHMP4BP1P59074 171 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 NKX3-2P78367 333 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 AKAP17AQ02040 695 aaKnown RBP9.48□□□□□ -0.89
FARP1-220ENST00000596613 TROAPQ12815 778 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 PPIGQ13427 754 aaKnown RBP eCLIP9.48□□□□□ -0.891e-12■□□□□ 10
FARP1-220ENST00000596613 LRIT3Q3SXY7 679 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 FAM47CQ5HY64 1035 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 ELMSAN1Q6PJG2 1045 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 DHX37Q8IY37 1157 aaKnown RBP9.48□□□□□ -0.89
FARP1-220ENST00000596613 MB21D2Q8IYB1 491 aaPredicted RBP9.48□□□□□ -0.89
FARP1-220ENST00000596613 RPUSD2Q8IZ73 545 aaKnown RBP9.48□□□□□ -0.89
FARP1-220ENST00000596613 TMEM87AQ8NBN3 555 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 NXPE3Q969Y0 559 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 PLD4Q96BZ4 506 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 FGD4Q96M96 766 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 PIGSQ96S52 555 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 LPIN3Q9BQK8 851 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 BHLHE41Q9C0J9 482 aaPredicted RBP9.48□□□□□ -0.89
FARP1-220ENST00000596613 IL25Q9H293 177 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 MRVI1Q9Y6F6 885 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 SMCHD1A6NHR9 2005 aa9.48□□□□□ -0.89
FARP1-220ENST00000596613 TNRC18O15417 2968 aaPredicted RBP9.47□□□□□ -0.89
FARP1-220ENST00000596613 SMNDC1O75940 238 aaKnown RBP eCLIP9.47□□□□□ -0.89
FARP1-220ENST00000596613 TIMP1P01033 207 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 TGFB3P10600 412 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 TCF3P15923 654 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 COL8A1P27658 744 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 GSTT1P30711 240 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 GRIA4P48058 902 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 DGKDQ16760 1214 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 CEP135Q66GS9 1140 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 CCSAPQ6IQ19 270 aaPredicted RBP9.47□□□□□ -0.89
FARP1-220ENST00000596613 PSAPL1Q6NUJ1 521 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 FANCBQ8NB91 859 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 POP1Q99575 1024 aaKnown RBP9.47□□□□□ -0.89
FARP1-220ENST00000596613 KATNAL1Q9BW62 490 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 SPZ1Q9BXG8 430 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 KATNBL1Q9H079 304 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 SMG9Q9H0W8 520 aaKnown RBP9.47□□□□□ -0.89
FARP1-220ENST00000596613 GLT8D2Q9H1C3 349 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 MLXIPQ9HAP2 919 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 LY9Q9HBG7 655 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 PDLIM7Q9NR12 457 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 PXMP2Q9NR77 195 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 FRRS1LQ9P0K9 344 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 LAMA4Q16363 1823 aa9.47□□□□□ -0.89
FARP1-220ENST00000596613 TMEM238LA0A1B0GVL6 79 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 MYADML2A6NDP7 307 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 SPDYE3A6NKU9 549 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 METTL12A8MUP2 240 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 NOP56O00567 594 aaKnown RBP9.46□□□□□ -0.9
FARP1-220ENST00000596613 SH2B2O14492 632 aaPredicted RBP9.46□□□□□ -0.9
FARP1-220ENST00000596613 SCAMP3O14828 347 aaKnown RBP9.46□□□□□ -0.9
FARP1-220ENST00000596613 ZBTB43O43298 467 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.9
FARP1-220ENST00000596613 EDNRBP24530 442 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 CDK7P50613 346 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 HSD17B4P51659 736 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 PTPN11Q06124 597 aaPredicted RBP9.46□□□□□ -0.9
FARP1-220ENST00000596613 FAAP100Q0VG06 881 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 MFSD5Q6N075 450 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 XRRA1Q6P2D8 792 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 STOX1Q6ZVD7 989 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 NLRX1Q86UT6 975 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 MICALL1Q8N3F8 863 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 GIMAP8Q8ND71 665 aaPredicted RBP9.46□□□□□ -0.9
FARP1-220ENST00000596613 C3orf58Q8NDZ4 430 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 TBC1D5Q92609 795 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 MTMR8Q96EF0 704 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 RNPC3Q96LT9 517 aaKnown RBP9.46□□□□□ -0.9
FARP1-220ENST00000596613 PRO3102Q9H379 93 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 PSTPIP2Q9H939 334 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 STARD13Q9Y3M8 1113 aa9.46□□□□□ -0.9
FARP1-220ENST00000596613 TRIM43BA6NCK2 446 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 HOXA13P31271 388 aaPredicted RBP9.45□□□□□ -0.9
FARP1-220ENST00000596613 DGKGP49619 791 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 BFSP2Q13515 415 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 NEDD9Q14511 834 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 LY6KQ17RY6 165 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 NFRKBQ6P4R8 1299 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 SGMS1Q86VZ5 419 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 MICU3Q86XE3 530 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 C7orf31Q8N865 590 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms