RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 AEBP2Q6ZN18 517 aaPredicted RBP29.75■■■□□ 2.35
FARP1-220ENST00000596613 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
FARP1-220ENST00000596613 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
FARP1-220ENST00000596613 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
FARP1-220ENST00000596613 FOXD1Q16676 465 aa23.67■■□□□ 1.38
FARP1-220ENST00000596613 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
FARP1-220ENST00000596613 MSH5O43196 834 aa22.25■■□□□ 1.15
FARP1-220ENST00000596613 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
FARP1-220ENST00000596613 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
FARP1-220ENST00000596613 ADRA2BP18089 450 aa22.12■■□□□ 1.13
FARP1-220ENST00000596613 POTEDQ86YR6 584 aa21.39■■□□□ 1.01
FARP1-220ENST00000596613 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
FARP1-220ENST00000596613 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
FARP1-220ENST00000596613 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
FARP1-220ENST00000596613 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
FARP1-220ENST00000596613 NISCHQ9Y2I1 1504 aa19.73■□□□□ 0.75
FARP1-220ENST00000596613 CNKSR2Q8WXI2 1034 aa19.66■□□□□ 0.74
FARP1-220ENST00000596613 HOXD11P31277 338 aaPredicted RBP19.54■□□□□ 0.72
FARP1-220ENST00000596613 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
FARP1-220ENST00000596613 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
FARP1-220ENST00000596613 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
FARP1-220ENST00000596613 KCNA4P22459 653 aa19.29■□□□□ 0.68
FARP1-220ENST00000596613 CACNB1Q02641 598 aaPredicted RBP18.97■□□□□ 0.63
FARP1-220ENST00000596613 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
FARP1-220ENST00000596613 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
FARP1-220ENST00000596613 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
FARP1-220ENST00000596613 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
FARP1-220ENST00000596613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.571e-12■□□□□ 8.7
FARP1-220ENST00000596613 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
FARP1-220ENST00000596613 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
FARP1-220ENST00000596613 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
FARP1-220ENST00000596613 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
FARP1-220ENST00000596613 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
FARP1-220ENST00000596613 APLP2Q06481 763 aa17.91■□□□□ 0.46
FARP1-220ENST00000596613 CAPN15O75808 1086 aa17.9■□□□□ 0.46
FARP1-220ENST00000596613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
FARP1-220ENST00000596613 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
FARP1-220ENST00000596613 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
FARP1-220ENST00000596613 ZBTB22O15209 634 aa17.77■□□□□ 0.44
FARP1-220ENST00000596613 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
FARP1-220ENST00000596613 DSG3P32926 999 aa17.74■□□□□ 0.43
FARP1-220ENST00000596613 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
FARP1-220ENST00000596613 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
FARP1-220ENST00000596613 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
FARP1-220ENST00000596613 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
FARP1-220ENST00000596613 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.41
FARP1-220ENST00000596613 ABCC9O60706 1549 aa17.43■□□□□ 0.38
FARP1-220ENST00000596613 ABCB7O75027 752 aa17.42■□□□□ 0.38
FARP1-220ENST00000596613 POLA2Q14181 598 aa17.18■□□□□ 0.34
FARP1-220ENST00000596613 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
FARP1-220ENST00000596613 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
FARP1-220ENST00000596613 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
FARP1-220ENST00000596613 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
FARP1-220ENST00000596613 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
FARP1-220ENST00000596613 POTEHQ6S545 545 aa16.82■□□□□ 0.28
FARP1-220ENST00000596613 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
FARP1-220ENST00000596613 NACADO15069 1562 aa16.64■□□□□ 0.25
FARP1-220ENST00000596613 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
FARP1-220ENST00000596613 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
FARP1-220ENST00000596613 FBLN2P98095 1184 aa16.57■□□□□ 0.24
FARP1-220ENST00000596613 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
FARP1-220ENST00000596613 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
FARP1-220ENST00000596613 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
FARP1-220ENST00000596613 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
FARP1-220ENST00000596613 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
FARP1-220ENST00000596613 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
FARP1-220ENST00000596613 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
FARP1-220ENST00000596613 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
FARP1-220ENST00000596613 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
FARP1-220ENST00000596613 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
FARP1-220ENST00000596613 FKBP8Q14318 412 aa16.23■□□□□ 0.19
FARP1-220ENST00000596613 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
FARP1-220ENST00000596613 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
FARP1-220ENST00000596613 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
FARP1-220ENST00000596613 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
FARP1-220ENST00000596613 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
FARP1-220ENST00000596613 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
FARP1-220ENST00000596613 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
FARP1-220ENST00000596613 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
FARP1-220ENST00000596613 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
FARP1-220ENST00000596613 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
FARP1-220ENST00000596613 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
FARP1-220ENST00000596613 HAX1O00165 279 aa15.86■□□□□ 0.13
FARP1-220ENST00000596613 SP7Q8TDD2 431 aaPredicted RBP15.84■□□□□ 0.13
FARP1-220ENST00000596613 PRKAR2AP13861 404 aaKnown RBP15.83■□□□□ 0.12
FARP1-220ENST00000596613 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
FARP1-220ENST00000596613 PRR29P0C7W0 189 aa15.79■□□□□ 0.12
FARP1-220ENST00000596613 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
FARP1-220ENST00000596613 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
FARP1-220ENST00000596613 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.1
FARP1-220ENST00000596613 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
FARP1-220ENST00000596613 PROM2Q8N271 834 aa15.63■□□□□ 0.09
FARP1-220ENST00000596613 CHADLQ6NUI6 762 aa15.6■□□□□ 0.09
FARP1-220ENST00000596613 C19orf67A6NJJ6 358 aa15.57■□□□□ 0.08
FARP1-220ENST00000596613 EVX2Q03828 476 aa15.53■□□□□ 0.08
FARP1-220ENST00000596613 FBXO3Q9UK99 471 aa15.53■□□□□ 0.08
FARP1-220ENST00000596613 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
FARP1-220ENST00000596613 RTN4Q9NQC3 1192 aaKnown RBP15.5■□□□□ 0.07
FARP1-220ENST00000596613 FARP1Q9Y4F1 1045 aaPredicted RBP15.47■□□□□ 0.07
FARP1-220ENST00000596613 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms