RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 EFCAB12Q6NXP0 572 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 RRAGAQ7L523 313 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 METTL23Q86XA0 190 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 CD302Q8IX05 232 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 ETNPPLQ8TBG4 499 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 GOLGA1Q92805 767 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 TRIM11Q96F44 468 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 MTIF3Q9H2K0 278 aaKnown RBP8.13□□□□□ -1.11
ZNF554-202ENST00000588534 SLITRK3O94933 977 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 SHROOM1Q2M3G4 852 aaPredicted RBP8.13□□□□□ -1.11
ZNF554-202ENST00000588534 BEST2Q8NFU1 509 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 AFG1LQ8WV93 481 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 RBPJLQ9UBG7 517 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 AGO2Q9UKV8 859 aaKnown RBP8.13□□□□□ -1.11
ZNF554-202ENST00000588534 IL18RAPO95256 599 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 SLC10A3P09131 477 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 TNNT1P13805 278 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 UBA1P22314 1058 aaKnown RBP8.13□□□□□ -1.11
ZNF554-202ENST00000588534 BFSP2Q13515 415 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 C10orf76Q5T2E6 689 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 GAS2L3Q86XJ1 694 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 FAM133AQ8N9E0 248 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 REPS2Q8NFH8 660 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 IPO4Q8TEX9 1081 aaKnown RBP8.13□□□□□ -1.11
ZNF554-202ENST00000588534 HAS1Q92839 578 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 BTBD7Q9P203 1132 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 HESX1Q9UBX0 185 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 NUB1Q9Y5A7 615 aa8.13□□□□□ -1.11
ZNF554-202ENST00000588534 SPDYE4A6NLX3 237 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 ADCY3O60266 1144 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 TBXAS1P24557 533 aaPredicted RBP8.12□□□□□ -1.11
ZNF554-202ENST00000588534 MAGEA1P43355 309 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 RARRES1P49788 294 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 PDE6CP51160 858 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 RTP1P59025 263 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 GNG11P61952 73 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 NFX1Q12986 1120 aaKnown RBP8.12□□□□□ -1.11
ZNF554-202ENST00000588534 KRT31Q15323 416 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 DUSP28Q4G0W2 176 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 NT5DC1Q5TFE4 455 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 TWF2Q6IBS0 349 aaKnown RBP8.12□□□□□ -1.11
ZNF554-202ENST00000588534 FOXR2Q6PJQ5 311 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 SRGAP1Q7Z6B7 1085 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 TLK2Q86UE8 772 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 RASAL3Q86YV0 1011 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 CALR3Q96L12 384 aaKnown RBP8.12□□□□□ -1.11
ZNF554-202ENST00000588534 CREBZFQ9NS37 354 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.12□□□□□ -1.11
ZNF554-202ENST00000588534 FRMPD4Q14CM0 1322 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 MED7O43513 233 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 ERLIN1O75477 346 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 ITGB5P18084 799 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 GARTP22102 1010 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 VAMP7P51809 220 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 GRIN1Q05586 938 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 TAF12Q16514 161 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 DCAF4L1Q3SXM0 396 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 GLIPR1L2Q4G1C9 344 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 KRT39Q6A163 491 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 ZNF410Q86VK4 478 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 SYCE1Q8N0S2 351 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 PPM1KQ8N3J5 372 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 NME8Q8N427 588 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 SLAIN1Q8ND83 568 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 URGCPQ8TCY9 931 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 PCIF1Q9H4Z3 704 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 SAMSN1Q9NSI8 373 aaKnown RBP8.12□□□□□ -1.11
ZNF554-202ENST00000588534 LIMA1Q9UHB6 759 aaKnown RBP8.12□□□□□ -1.11
ZNF554-202ENST00000588534 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 ARAP2Q8WZ64 1704 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 COL1A2P08123 1366 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 GOLGA6L10A0A0M3HER8 536 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 TMCO5BA8MYB1 307 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 CD19P15391 556 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 GPC3P51654 580 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 POLR2FP61218 127 aaKnown RBP8.12□□□□□ -1.11
ZNF554-202ENST00000588534 TFAMQ00059 246 aaKnown RBP8.12□□□□□ -1.11
ZNF554-202ENST00000588534 GIT2Q14161 759 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 DUOXA2Q1HG44 320 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 VSTM4Q8IW00 320 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 CCDC170Q8IYT3 715 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 RNF169Q8NCN4 708 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 XPNPEP3Q9NQH7 507 aa8.12□□□□□ -1.11
ZNF554-202ENST00000588534 TNS1Q9HBL0 1735 aaKnown RBP8.11□□□□□ -1.11
ZNF554-202ENST00000588534 HMGCRP04035 888 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
ZNF554-202ENST00000588534 FSCN1Q16658 493 aaKnown RBP8.11□□□□□ -1.11
ZNF554-202ENST00000588534 SPOUT1Q5T280 376 aaKnown RBP8.11□□□□□ -1.11
ZNF554-202ENST00000588534 CYP4F22Q6NT55 531 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 CYP2W1Q8TAV3 490 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 TMEM143Q96AN5 459 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 PNMA5Q96PV4 448 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 HSD17B14Q9BPX1 270 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 TRMT1Q9NXH9 659 aaKnown RBP8.11□□□□□ -1.11
ZNF554-202ENST00000588534 Q9Y3F1 56 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 ATP8B3O60423 1300 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 NRCAMQ92823 1304 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 TIAM2Q8IVF5 1701 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 CARNS1A5YM72 827 aa8.11□□□□□ -1.11
ZNF554-202ENST00000588534 DCDC2CA8MYV0 355 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms