RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SMTNP53814 917 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 SREBF2Q12772 1141 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 WHAMMP3Q1A5X7 153 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 C12orf56Q8IXR9 622 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 GOLGA1Q92805 767 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 SECISBP2LQ93073 1101 aaKnown RBP24.75■■□□□ 1.55
CCDC47-204ENST00000582252 SPAG5Q96R06 1193 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 MROH8Q9H579 483 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 C17orf75Q9HAS0 396 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 GABBR1Q9UBS5 961 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 EXOC7Q9UPT5 735 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 BZW2Q9Y6E2 419 aaKnown RBP24.75■■□□□ 1.55
CCDC47-204ENST00000582252 EXOC3O60645 756 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 EIF3JO75822 258 aaKnown RBP24.75■■□□□ 1.55
CCDC47-204ENST00000582252 ABL1P00519 1130 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 PON1P27169 355 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 ICAM3P32942 547 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 CYP2J2P51589 502 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 Q3C1V9 767 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 KLHDC7AQ5VTJ3 777 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 HGSNATQ68CP4 663 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 MIS18BP1Q6P0N0 1132 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 GCNT4Q9P109 453 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 MORF4L1Q9UBU8 362 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 TRIM10Q9UDY6 481 aa24.75■■□□□ 1.55
CCDC47-204ENST00000582252 PLXNB2O15031 1838 aa24.74■■□□□ 1.55
CCDC47-204ENST00000582252 IGF2BP3O00425 579 aaKnown RBP eCLIP24.74■■□□□ 1.55
CCDC47-204ENST00000582252 KRT13P13646 458 aa24.74■■□□□ 1.55
CCDC47-204ENST00000582252 MAGEA1P43355 309 aa24.74■■□□□ 1.55
CCDC47-204ENST00000582252 NCKAP1LP55160 1127 aa24.74■■□□□ 1.55
CCDC47-204ENST00000582252 GTF2BQ00403 316 aa24.74■■□□□ 1.55
CCDC47-204ENST00000582252 CYP27A1Q02318 531 aa24.74■■□□□ 1.55
CCDC47-204ENST00000582252 ASTE1Q2TB18 679 aaPredicted RBP24.74■■□□□ 1.55
CCDC47-204ENST00000582252 UTP14CQ5TAP6 766 aaKnown RBP24.74■■□□□ 1.55
CCDC47-204ENST00000582252 SRGAP1Q7Z6B7 1085 aa24.74■■□□□ 1.55
CCDC47-204ENST00000582252 FMNL3Q8IVF7 1028 aa24.74■■□□□ 1.55
CCDC47-204ENST00000582252 KSR1Q8IVT5 923 aa24.74■■□□□ 1.55
CCDC47-204ENST00000582252 KIFAP3Q92845 792 aa24.74■■□□□ 1.55
CCDC47-204ENST00000582252 ARGLU1Q9NWB6 273 aaPredicted RBP24.74■■□□□ 1.55
CCDC47-204ENST00000582252 ANO9A1A5B4 782 aa24.73■■□□□ 1.55
CCDC47-204ENST00000582252 RBAK-RBAKDNI3L0D1 243 aa24.73■■□□□ 1.55
CCDC47-204ENST00000582252 RGS20O76081 388 aa24.73■■□□□ 1.55
CCDC47-204ENST00000582252 UCHL3P15374 230 aa24.73■■□□□ 1.55
CCDC47-204ENST00000582252 KLHL30Q0D2K2 578 aa24.73■■□□□ 1.55
CCDC47-204ENST00000582252 FAM102BQ5T8I3 360 aa24.73■■□□□ 1.55
CCDC47-204ENST00000582252 HAUS6Q7Z4H7 955 aa24.73■■□□□ 1.55
CCDC47-204ENST00000582252 LRRN4CLQ8ND94 238 aa24.73■■□□□ 1.55
CCDC47-204ENST00000582252 TRIM58Q8NG06 486 aa24.73■■□□□ 1.55
CCDC47-204ENST00000582252 ZNF263O14978 683 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 PJA2O43164 708 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 TACC1O75410 805 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 SLC9A1P19634 815 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 ABCD1P33897 745 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 PLA2G4FQ68DD2 849 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 PAXIP1Q6ZW49 1069 aaPredicted RBP24.72■■□□□ 1.55
CCDC47-204ENST00000582252 ANKRD13CQ8N6S4 541 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 MCPH1Q8NEM0 835 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 CEP170P1Q96L14 293 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 MPHOSPH6Q99547 160 aaKnown RBP24.72■■□□□ 1.55
CCDC47-204ENST00000582252 LACRTQ9GZZ8 138 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 KCNG1Q9UIX4 513 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 MAPK13O15264 365 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 ANXA13P27216 316 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 FMO5P49326 533 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 PEX3P56589 373 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 ACTR2P61160 394 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 DMP1Q13316 513 aaPredicted RBP24.72■■□□□ 1.55
CCDC47-204ENST00000582252 FAM110CQ1W6H9 321 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 INTS8Q75QN2 995 aaKnown RBP24.72■■□□□ 1.55
CCDC47-204ENST00000582252 ANO5Q75V66 913 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 ALS2CR12Q96Q35 445 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 CREBZFQ9NS37 354 aa24.72■■□□□ 1.55
CCDC47-204ENST00000582252 N4BP1O75113 896 aaKnown RBP24.71■■□□□ 1.55
CCDC47-204ENST00000582252 ALDH5A1P51649 535 aaPredicted RBP24.71■■□□□ 1.55
CCDC47-204ENST00000582252 BFSP1Q12934 665 aa24.71■■□□□ 1.55
CCDC47-204ENST00000582252 TAF1CQ15572 869 aaPredicted RBP24.71■■□□□ 1.55
CCDC47-204ENST00000582252 IFNL1Q8IU54 200 aa24.71■■□□□ 1.55
CCDC47-204ENST00000582252 GPR161Q8N6U8 529 aaKnown RBP24.71■■□□□ 1.55
CCDC47-204ENST00000582252 RABGGTAQ92696 567 aa24.71■■□□□ 1.55
CCDC47-204ENST00000582252 DOCK5Q9H7D0 1870 aa24.71■■□□□ 1.55
CCDC47-204ENST00000582252 PLXNA1Q9UIW2 1896 aa24.7■■□□□ 1.55
CCDC47-204ENST00000582252 RCCD1A6NED2 376 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 POTEB2H3BUK9 544 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 TLR2O60603 784 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 DGAT1O75907 488 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 APLP1P51693 650 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 NPEPPSP55786 919 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 CHMP4BP1P59074 171 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 C10orf76Q5T2E6 689 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 SWSAP1Q6NVH7 229 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 ABHD15Q6UXT9 468 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 RSRC2Q7L4I2 434 aaKnown RBP24.7■■□□□ 1.54
CCDC47-204ENST00000582252 FAM133AQ8N9E0 248 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 SPIRE2Q8WWL2 714 aa24.7■■□□□ 1.54
CCDC47-204ENST00000582252 MYH9P35579 1960 aaKnown RBP24.7■■□□□ 1.54
CCDC47-204ENST00000582252 H0YCG3 227 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 SUPT20HL2P0C7V6 817 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 ACTN1P12814 892 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 CETN1Q12798 172 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 KCTD2Q14681 263 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms