RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 SP7Q8TDD2 431 aaPredicted RBP19.45■□□□□ 0.7
ITGB4-205ENST00000579211 SAMD11Q96NU1 681 aa19.45■□□□□ 0.7
ITGB4-205ENST00000579211 ADGRA3Q8IWK6 1321 aa19.45■□□□□ 0.7
ITGB4-205ENST00000579211 DGKIO75912 1065 aa19.44■□□□□ 0.7
ITGB4-205ENST00000579211 BMP15O95972 392 aa19.44■□□□□ 0.7
ITGB4-205ENST00000579211 PHKA2P46019 1235 aa19.44■□□□□ 0.7
ITGB4-205ENST00000579211 NCBP1Q09161 790 aaKnown RBP19.44■□□□□ 0.7
ITGB4-205ENST00000579211 PAN2Q504Q3 1202 aaKnown RBP19.44■□□□□ 0.7
ITGB4-205ENST00000579211 SPOUT1Q5T280 376 aaKnown RBP19.44■□□□□ 0.7
ITGB4-205ENST00000579211 SRGAP1Q7Z6B7 1085 aa19.44■□□□□ 0.7
ITGB4-205ENST00000579211 IGSF22Q8N9C0 903 aa19.44■□□□□ 0.7
ITGB4-205ENST00000579211 RNF169Q8NCN4 708 aa19.44■□□□□ 0.7
ITGB4-205ENST00000579211 CDK5RAP3Q96JB5 506 aa19.44■□□□□ 0.7
ITGB4-205ENST00000579211 C17orf80Q9BSJ5 609 aa19.44■□□□□ 0.7
ITGB4-205ENST00000579211 DDX19AQ9NUU7 478 aaKnown RBP19.44■□□□□ 0.7
ITGB4-205ENST00000579211 RWDD3Q9Y3V2 267 aa19.44■□□□□ 0.7
ITGB4-205ENST00000579211 CHD7Q9P2D1 2997 aa19.44■□□□□ 0.7
ITGB4-205ENST00000579211 CDH23Q9H251 3354 aa19.43■□□□□ 0.7
ITGB4-205ENST00000579211 CCDC85BQ15834 202 aaPredicted RBP19.43■□□□□ 0.7
ITGB4-205ENST00000579211 FAM102BQ5T8I3 360 aa19.43■□□□□ 0.7
ITGB4-205ENST00000579211 ARL6IP4Q66PJ3 421 aaKnown RBP19.43■□□□□ 0.7
ITGB4-205ENST00000579211 TWF2Q6IBS0 349 aaKnown RBP19.43■□□□□ 0.7
ITGB4-205ENST00000579211 PADI6Q6TGC4 694 aa19.43■□□□□ 0.7
ITGB4-205ENST00000579211 SPRED2Q7Z698 418 aa19.43■□□□□ 0.7
ITGB4-205ENST00000579211 TMEM192Q8IY95 271 aa19.43■□□□□ 0.7
ITGB4-205ENST00000579211 MCPH1Q8NEM0 835 aa19.43■□□□□ 0.7
ITGB4-205ENST00000579211 POLR3FQ9H1D9 316 aaPredicted RBP19.43■□□□□ 0.7
ITGB4-205ENST00000579211 CHST12Q9NRB3 414 aa19.43■□□□□ 0.7
ITGB4-205ENST00000579211 DNM3Q9UQ16 869 aa19.43■□□□□ 0.7
ITGB4-205ENST00000579211 PIN4Q9Y237 131 aaKnown RBP19.43■□□□□ 0.7
ITGB4-205ENST00000579211 PRRC2BQ5JSZ5 2229 aaKnown RBP19.43■□□□□ 0.7
ITGB4-205ENST00000579211 PP2D1A8MPX8 630 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 C9IYK1 514 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 STX6O43752 255 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 ERLIN2O94905 339 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 CDC25AP30304 524 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 CTNNB1P35222 781 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 ADGRE1Q14246 886 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 DSC3Q14574 896 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 SF3A1Q15459 793 aaKnown RBP19.42■□□□□ 0.7
ITGB4-205ENST00000579211 IL17AQ16552 155 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 EPC2Q52LR7 807 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 CMTR2Q8IYT2 770 aaKnown RBP19.42■□□□□ 0.7
ITGB4-205ENST00000579211 ABI1Q8IZP0 508 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 SPRYD3Q8NCJ5 442 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 SLC17A8Q8NDX2 589 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 GDPD5Q8WTR4 605 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 XPNPEP1Q9NQW7 623 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 TMEM161AQ9NX61 479 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 COL6A3P12111 3177 aa19.42■□□□□ 0.7
ITGB4-205ENST00000579211 COL4A6Q14031 1691 aa19.41■□□□□ 0.7
ITGB4-205ENST00000579211 EPOPA6NHQ4 379 aa19.41■□□□□ 0.7
ITGB4-205ENST00000579211 TBKBP1A7MCY6 615 aa19.41■□□□□ 0.7
ITGB4-205ENST00000579211 HOXA2O43364 376 aa19.41■□□□□ 0.7
ITGB4-205ENST00000579211 GRB10Q13322 594 aa19.41■□□□□ 0.7
ITGB4-205ENST00000579211 RASSF8Q8NHQ8 419 aa19.41■□□□□ 0.7
ITGB4-205ENST00000579211 ZNF689Q96CS4 500 aaPredicted RBP19.41■□□□□ 0.7
ITGB4-205ENST00000579211 BHMT2Q9H2M3 363 aa19.41■□□□□ 0.7
ITGB4-205ENST00000579211 ZSCAN16Q9H4T2 348 aaPredicted RBP19.41■□□□□ 0.7
ITGB4-205ENST00000579211 ELAC1Q9H777 363 aaKnown RBP19.41■□□□□ 0.7
ITGB4-205ENST00000579211 IFT122Q9HBG6 1241 aa19.41■□□□□ 0.7
ITGB4-205ENST00000579211 TDRD15B5MCY1 1934 aaKnown RBP19.41■□□□□ 0.7
ITGB4-205ENST00000579211 LRRIQ4A6NIV6 560 aa19.4■□□□□ 0.7
ITGB4-205ENST00000579211 INO80B-WBP1J3KQ70 363 aa19.4■□□□□ 0.7
ITGB4-205ENST00000579211 SKIP12755 728 aa19.4■□□□□ 0.7
ITGB4-205ENST00000579211 ARL2P36404 184 aa19.4■□□□□ 0.7
ITGB4-205ENST00000579211 FAM189BP81408 668 aa19.4■□□□□ 0.7
ITGB4-205ENST00000579211 GPM6BQ13491 265 aa19.4■□□□□ 0.7
ITGB4-205ENST00000579211 ECM1Q16610 540 aa19.4■□□□□ 0.7
ITGB4-205ENST00000579211 ASAP3Q8TDY4 903 aa19.4■□□□□ 0.7
ITGB4-205ENST00000579211 NT5C3AQ9H0P0 336 aa19.4■□□□□ 0.7
ITGB4-205ENST00000579211 PLXNA4Q9HCM2 1894 aa19.39■□□□□ 0.7
ITGB4-205ENST00000579211 E9PMD0 336 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 SSBP05455 408 aaKnown RBP eCLIP19.39■□□□□ 0.69
ITGB4-205ENST00000579211 CYP11B2P19099 503 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 GLRA2P23416 452 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 UBA7P41226 1012 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 GATMP50440 423 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 PTENP60484 403 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 CEBPZQ03701 1054 aaKnown RBP19.39■□□□□ 0.69
ITGB4-205ENST00000579211 SKIV2LQ15477 1246 aaKnown RBP19.39■□□□□ 0.69
ITGB4-205ENST00000579211 ECHDC2Q86YB7 292 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 ZBTB8OSQ8IWT0 167 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 CALML4Q96GE6 196 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 IFT74Q96LB3 600 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 AK8Q96MA6 479 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 PLIN2Q99541 437 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 GPRC5CQ9NQ84 441 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 MTMR6Q9Y217 621 aa19.39■□□□□ 0.69
ITGB4-205ENST00000579211 A0A0U1RQF3 1178 aa19.38■□□□□ 0.69
ITGB4-205ENST00000579211 EYA4O95677 639 aa19.38■□□□□ 0.69
ITGB4-205ENST00000579211 EOMESO95936 686 aa19.38■□□□□ 0.69
ITGB4-205ENST00000579211 RB1P06400 928 aa19.38■□□□□ 0.69
ITGB4-205ENST00000579211 FGFR1P11362 822 aa19.38■□□□□ 0.69
ITGB4-205ENST00000579211 PDIA4P13667 645 aaKnown RBP19.38■□□□□ 0.69
ITGB4-205ENST00000579211 BMPR1AP36894 532 aa19.38■□□□□ 0.69
ITGB4-205ENST00000579211 RESTQ13127 1097 aa19.38■□□□□ 0.69
ITGB4-205ENST00000579211 CAPSQ13938 189 aa19.38■□□□□ 0.69
ITGB4-205ENST00000579211 PCBP1Q15365 356 aaKnown RBP eCLIP19.38■□□□□ 0.69
ITGB4-205ENST00000579211 PTPROQ16827 1216 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms