RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 RHPN2Q8IUC4 686 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 ADHFE1Q8IWW8 467 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 OXER1Q8TDS5 423 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
MKS1-205ENST00000577315 ZNF668Q96K58 619 aaPredicted RBP16.73■□□□□ 0.27
MKS1-205ENST00000577315 TRAIPQ9BWF2 469 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 CD320Q9NPF0 282 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 A0A087WZ62 844 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 TBX10O75333 385 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 FDPSP14324 419 aaKnown RBP16.72■□□□□ 0.27
MKS1-205ENST00000577315 NRIP1P48552 1158 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 RAB27AP51159 221 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 NEK4P51957 841 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 KRT17Q04695 432 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 DLX2Q07687 328 aaPredicted RBP16.72■□□□□ 0.27
MKS1-205ENST00000577315 DRP2Q13474 957 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 ADGRD2Q7Z7M1 963 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 ZNF598Q86UK7 904 aaKnown RBP16.72■□□□□ 0.27
MKS1-205ENST00000577315 TCP11Q8WWU5 503 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 HAS1Q92839 578 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 CEP170P1Q96L14 293 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 ZNF558Q96NG5 402 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 FDXACB1Q9BRP7 624 aaPredicted RBP16.72■□□□□ 0.27
MKS1-205ENST00000577315 TLE6Q9H808 572 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 NGRNQ9NPE2 291 aaKnown RBP16.72■□□□□ 0.27
MKS1-205ENST00000577315 GJB4Q9NTQ9 266 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 RNF19AQ9NV58 838 aa16.72■□□□□ 0.27
MKS1-205ENST00000577315 TMEM150BA6NC51 233 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 C19orf67A6NJJ6 358 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 ASAP2O43150 1006 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 EYA4O95677 639 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 SRGAP2BP0DMP2 458 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 GTF2F1P35269 517 aaKnown RBP eCLIP16.71■□□□□ 0.27
MKS1-205ENST00000577315 POLGP54098 1239 aaPredicted RBP16.71■□□□□ 0.27
MKS1-205ENST00000577315 ZP2Q05996 745 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 COASYQ13057 564 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 KCNT2Q6UVM3 1135 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 SRGAP1Q7Z6B7 1085 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 NECAB1Q8N987 351 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 NSUN7Q8NE18 718 aaKnown RBP16.71■□□□□ 0.27
MKS1-205ENST00000577315 PSPC1Q8WXF1 523 aaKnown RBP16.71■□□□□ 0.27
MKS1-205ENST00000577315 TNFRSF25Q93038 417 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 SH2D3AQ9BRG2 576 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 LXNQ9BS40 222 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 LRFN3Q9BTN0 628 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 DHX33Q9H6R0 707 aaKnown RBP16.71■□□□□ 0.27
MKS1-205ENST00000577315 ZSWIM4Q9H7M6 989 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 COL4A3BPQ9Y5P4 624 aa16.71■□□□□ 0.27
MKS1-205ENST00000577315 FSCN2O14926 492 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 LINC01565O15544 149 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 FGFR4P22455 802 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 YWHABP31946 246 aaKnown RBP16.7■□□□□ 0.26
MKS1-205ENST00000577315 PHKA2P46019 1235 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 NR5A1Q13285 461 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 BMS1Q14692 1282 aaKnown RBP16.7■□□□□ 0.26
MKS1-205ENST00000577315 PLA2G4FQ68DD2 849 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 TWF2Q6IBS0 349 aaKnown RBP16.7■□□□□ 0.26
MKS1-205ENST00000577315 NCAPH2Q6IBW4 605 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 LRRC55Q6ZSA7 311 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 CATSPER4Q7RTX7 472 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 RNF169Q8NCN4 708 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 MSLNLQ96KJ4 702 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 NLRP4Q96MN2 994 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 SPG21Q9NZD8 308 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 PCDHA12Q9UN75 941 aa16.7■□□□□ 0.26
MKS1-205ENST00000577315 PIN4Q9Y237 131 aaKnown RBP16.7■□□□□ 0.26
MKS1-205ENST00000577315 ZNF623O75123 536 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 LARGE1O95461 756 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 NPEPPSP55786 919 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 ERVFC1P60507 584 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 SPIRE1Q08AE8 756 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 CLUL1Q15846 466 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 DUSP6Q16828 381 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 EARS2Q5JPH6 523 aaKnown RBP16.69■□□□□ 0.26
MKS1-205ENST00000577315 CLLU1OSQ5K130 101 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 RBM23Q86U06 439 aaKnown RBP16.69■□□□□ 0.26
MKS1-205ENST00000577315 HELQQ8TDG4 1101 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 KHSRPQ92945 711 aaKnown RBP eCLIP16.69■□□□□ 0.26
MKS1-205ENST00000577315 PGBD4Q96DM1 585 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 FAM105AQ9NUU6 356 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 CLEC1BQ9P126 229 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 HCSTQ9UBK5 93 aa16.69■□□□□ 0.26
MKS1-205ENST00000577315 ARIH1Q9Y4X5 557 aaPredicted RBP16.69■□□□□ 0.26
MKS1-205ENST00000577315 DCXO43602 365 aa16.68■□□□□ 0.26
MKS1-205ENST00000577315 CSDE1O75534 798 aaKnown RBP16.68■□□□□ 0.26
MKS1-205ENST00000577315 CENPBP07199 599 aaPredicted RBP16.68■□□□□ 0.26
MKS1-205ENST00000577315 ATF7P17544 494 aaPredicted RBP16.68■□□□□ 0.26
MKS1-205ENST00000577315 ALDH7A1P49419 539 aaKnown RBP16.68■□□□□ 0.26
MKS1-205ENST00000577315 PCBP1Q15365 356 aaKnown RBP eCLIP16.68■□□□□ 0.26
MKS1-205ENST00000577315 CALCRLQ16602 461 aa16.68■□□□□ 0.26
MKS1-205ENST00000577315 XKR9Q5GH70 373 aa16.68■□□□□ 0.26
MKS1-205ENST00000577315 DIS3L2Q8IYB7 885 aaKnown RBP16.68■□□□□ 0.26
MKS1-205ENST00000577315 SMRP1Q8NCR6 262 aa16.68■□□□□ 0.26
MKS1-205ENST00000577315 DYDC2Q96IM9 177 aa16.68■□□□□ 0.26
MKS1-205ENST00000577315 MTRQ99707 1265 aa16.68■□□□□ 0.26
MKS1-205ENST00000577315 IFT122Q9HBG6 1241 aa16.68■□□□□ 0.26
MKS1-205ENST00000577315 ENTPD7Q9NQZ7 604 aa16.68■□□□□ 0.26
MKS1-205ENST00000577315 HCN4Q9Y3Q4 1203 aa16.68■□□□□ 0.26
MKS1-205ENST00000577315 TDRD15B5MCY1 1934 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms