RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SULF1Q8IWU6 871 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 RPGRIP1Q96KN7 1286 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 CEP170P1Q96L14 293 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 IWS1Q96ST2 819 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 PNKPQ96T60 521 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 CBWD1Q9BRT8 395 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 SLC9A2Q9UBY0 812 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 ARID2Q68CP9 1835 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 ADM5C9JUS6 153 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 SORBS3O60504 671 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 DKC1O60832 514 aaKnown RBP eCLIP15.31■□□□□ 0.04
VPS33B-208ENST00000574755 KLRC1P26715 233 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 PRKCIP41743 596 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 SMTNP53814 917 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 DMP1Q13316 513 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-208ENST00000574755 BRD3Q15059 726 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 SWSAP1Q6NVH7 229 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 ANKRD35Q8N283 1001 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 SLC17A8Q8NDX2 589 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 NFASCO94856 1347 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 ZNF862O60290 1169 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 STAT1P42224 750 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 NAB2Q15742 525 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 VPS36Q86VN1 386 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 C12orf56Q8IXR9 622 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 XXYLT1Q8NBI6 393 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 PACSIN1Q9BY11 444 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 HSPBP1Q9NZL4 362 aa15.31■□□□□ 0.04
VPS33B-208ENST00000574755 GFPT2O94808 682 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 PRLRP16471 622 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 FERP16591 822 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 ACTR2P61160 394 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 DLG4P78352 724 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 C10orf76Q5T2E6 689 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 TMEM174Q8WUU8 243 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 PSMB7Q99436 277 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 INTS2Q9H0H0 1204 aaKnown RBP15.3■□□□□ 0.04
VPS33B-208ENST00000574755 RNF216Q9NWF9 866 aaPredicted RBP15.3■□□□□ 0.04
VPS33B-208ENST00000574755 FAM53CQ9NYF3 392 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 RNF181Q9P0P0 153 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 APEX2Q9UBZ4 518 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 DNAJC12Q9UKB3 198 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 RAB21Q9UL25 225 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 HYOU1Q9Y4L1 999 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 TELO2Q9Y4R8 837 aa15.3■□□□□ 0.04
VPS33B-208ENST00000574755 SPATA31C2B4DYI2 1134 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 F8VZ95 297 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 PEX10O60683 326 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 TCP1P17987 556 aaKnown RBP15.29■□□□□ 0.04
VPS33B-208ENST00000574755 NPTX2P47972 431 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 VAMP7P51809 220 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 STXBP2Q15833 593 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 NFRKBQ6P4R8 1299 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 CCDC60Q8IWA6 550 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-208ENST00000574755 KIFAP3Q92845 792 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 OSBPL9Q96SU4 736 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 KIFC3Q9BVG8 833 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 FHDC1Q9C0D6 1143 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-208ENST00000574755 MAF1Q9H063 256 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 SPON1Q9HCB6 807 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 SEPT9Q9UHD8 586 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-208ENST00000574755 NAGPAQ9UK23 515 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 EXOC7Q9UPT5 735 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 MYH9P35579 1960 aaKnown RBP15.29■□□□□ 0.04
VPS33B-208ENST00000574755 EMSYQ7Z589 1322 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 NCK2O43639 380 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 CXCR5P32302 372 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 SNRPFP62306 86 aaKnown RBP15.29■□□□□ 0.04
VPS33B-208ENST00000574755 ALKBH5Q6P6C2 394 aaKnown RBP15.29■□□□□ 0.04
VPS33B-208ENST00000574755 LBX2Q6XYB7 198 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 TMEM161BQ8NDZ6 487 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 DNERQ8NFT8 737 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 STK33Q9BYT3 514 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 KMT5AQ9NQR1 393 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 TBX20Q9UMR3 447 aa15.29■□□□□ 0.04
VPS33B-208ENST00000574755 PDE2AO00408 941 aaPredicted RBP15.28■□□□□ 0.04
VPS33B-208ENST00000574755 ATP8B1O43520 1251 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 EVI5O60447 810 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 ERLIN1O75477 346 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 PALMO75781 387 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 TBC1D8O95759 1140 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 ANXA13P27216 316 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 SOX5P35711 763 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 SOX10P56693 466 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 VSNL1P62760 191 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 PRKCEQ02156 737 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 CNTN2Q02246 1040 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 CETN1Q12798 172 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 DRAP1Q14919 205 aaPredicted RBP15.28■□□□□ 0.04
VPS33B-208ENST00000574755 LONRF2Q1L5Z9 754 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 MIS18BP1Q6P0N0 1132 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 GADL1Q6ZQY3 521 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 CREG2Q8IUH2 290 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 COG1Q8WTW3 980 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 UPF1Q92900 1129 aaKnown RBP eCLIP15.28■□□□□ 0.04
VPS33B-208ENST00000574755 PAPPA2Q9BXP8 1791 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 DENND3A2RUS2 1198 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms