RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 NEMFO60524 1076 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 STAG3L1P0CL83 205 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 FGFR1P11362 822 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 DARSP14868 501 aaKnown RBP11.19□□□□□ -0.62
RPA1-206ENST00000573994 QARSP47897 775 aaKnown RBP11.19□□□□□ -0.62
RPA1-206ENST00000573994 NPEPPSP55786 919 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 SPIRE1Q08AE8 756 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 CTTNQ14247 550 aaKnown RBP11.19□□□□□ -0.62
RPA1-206ENST00000573994 E2F4Q16254 413 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 PTPROQ16827 1216 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 TIGD5Q53EQ6 642 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 CMTR2Q8IYT2 770 aaKnown RBP11.19□□□□□ -0.62
RPA1-206ENST00000573994 CRIPAKQ8N1N5 446 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 MRPL38Q96DV4 380 aaKnown RBP11.19□□□□□ -0.62
RPA1-206ENST00000573994 DYDC2Q96IM9 177 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 C8orf76Q96K31 380 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 NECAB3Q96P71 396 aaPredicted RBP11.19□□□□□ -0.62
RPA1-206ENST00000573994 C11orf84Q9BUA3 381 aaPredicted RBP11.19□□□□□ -0.62
RPA1-206ENST00000573994 NIFKQ9BYG3 293 aaKnown RBP11.19□□□□□ -0.62
RPA1-206ENST00000573994 TBKBP1A7MCY6 615 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 C9IYK1 514 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 BHMG1C9JSJ3 638 aaPredicted RBP11.18□□□□□ -0.62
RPA1-206ENST00000573994 BAG4O95429 457 aaKnown RBP11.18□□□□□ -0.62
RPA1-206ENST00000573994 P4HBP07237 508 aaKnown RBP11.18□□□□□ -0.62
RPA1-206ENST00000573994 EIF4BP23588 611 aaKnown RBP11.18□□□□□ -0.62
RPA1-206ENST00000573994 BMPR1AP36894 532 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 DSC3Q14574 896 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 EPHA7Q15375 998 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 SAFBQ15424 915 aaKnown RBP eCLIP11.18□□□□□ -0.62
RPA1-206ENST00000573994 TCEAL5Q5H9L2 206 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 FAM102BQ5T8I3 360 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 SLC24A5Q71RS6 500 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 RHPN2Q8IUC4 686 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 KSR1Q8IVT5 923 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 SLFN12Q8IYM2 578 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 RNF169Q8NCN4 708 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 SYMPKQ92797 1274 aaKnown RBP11.18□□□□□ -0.62
RPA1-206ENST00000573994 CLP1Q92989 425 aaKnown RBP11.18□□□□□ -0.62
RPA1-206ENST00000573994 HLA-CQ95604 372 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 CEP170P1Q96L14 293 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 NLRP4Q96MN2 994 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 UHRF1Q96T88 793 aaPredicted RBP11.18□□□□□ -0.62
RPA1-206ENST00000573994 TMEM60Q9H2L4 133 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 UBE2ZQ9H832 354 aaPredicted RBP11.18□□□□□ -0.62
RPA1-206ENST00000573994 CYP26B1Q9NR63 512 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 RGS18Q9NS28 235 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 C1orf112Q9NSG2 853 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 SUCLA2Q9P2R7 463 aaPredicted RBP11.18□□□□□ -0.62
RPA1-206ENST00000573994 RABGEF1Q9UJ41 708 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 PCDHB7Q9Y5E2 793 aa11.18□□□□□ -0.62
RPA1-206ENST00000573994 A0A087WZ62 844 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 IGKV6-21A0A0C4DH24 114 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 C5orf67F2Z3F1 127 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 ZBTB39O15060 712 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 DKC1O60832 514 aaKnown RBP eCLIP11.17□□□□□ -0.62
RPA1-206ENST00000573994 MAFO75444 373 aaPredicted RBP11.17□□□□□ -0.62
RPA1-206ENST00000573994 YWHABP31946 246 aaKnown RBP11.17□□□□□ -0.62
RPA1-206ENST00000573994 MCM7P33993 719 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 TXKP42681 527 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 RBM25P49756 843 aaKnown RBP11.17□□□□□ -0.62
RPA1-206ENST00000573994 POLGP54098 1239 aaPredicted RBP11.17□□□□□ -0.62
RPA1-206ENST00000573994 CDC42EP1Q00587 391 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 SPOUT1Q5T280 376 aaKnown RBP11.17□□□□□ -0.62
RPA1-206ENST00000573994 FAM184AQ8NB25 1140 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 WNT2BQ93097 391 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 TMEM143Q96AN5 459 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 ZSCAN31Q96LW9 406 aaPredicted RBP11.17□□□□□ -0.62
RPA1-206ENST00000573994 FDXACB1Q9BRP7 624 aaPredicted RBP11.17□□□□□ -0.62
RPA1-206ENST00000573994 LLPHQ9BRT6 129 aaKnown RBP11.17□□□□□ -0.62
RPA1-206ENST00000573994 ATP6V0A4Q9HBG4 840 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 ALG13Q9NP73 1137 aaKnown RBP11.17□□□□□ -0.62
RPA1-206ENST00000573994 SH2B1Q9NRF2 756 aaPredicted RBP11.17□□□□□ -0.62
RPA1-206ENST00000573994 COG5Q9UP83 839 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 RWDD3Q9Y3V2 267 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 TTC3P53804 2025 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 BDP1A6H8Y1 2624 aa11.17□□□□□ -0.62
RPA1-206ENST00000573994 RB1P06400 928 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 KCNA5P22460 613 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 DNM2P50570 870 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
RPA1-206ENST00000573994 GNL2Q13823 731 aaKnown RBP11.16□□□□□ -0.62
RPA1-206ENST00000573994 EMC2Q15006 297 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 RABEP1Q15276 862 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 AAK1Q2M2I8 961 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 EP400NLQ6ZTU2 488 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 TPH2Q8IWU9 490 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 SLC7A3Q8WY07 619 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 EIF2AK1Q9BQI3 630 aaKnown RBP11.16□□□□□ -0.62
RPA1-206ENST00000573994 GCOM2Q9BZD3 368 aaPredicted RBP11.16□□□□□ -0.62
RPA1-206ENST00000573994 NSUN3Q9H649 340 aaKnown RBP11.16□□□□□ -0.62
RPA1-206ENST00000573994 ZSWIM4Q9H7M6 989 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 TTC12Q9H892 705 aaPredicted RBP11.16□□□□□ -0.62
RPA1-206ENST00000573994 RNF19AQ9NV58 838 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 TMEM161AQ9NX61 479 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 PIN4Q9Y237 131 aaKnown RBP11.16□□□□□ -0.62
RPA1-206ENST00000573994 PCDHGC5Q9Y5F6 944 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 COL4A3BPQ9Y5P4 624 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 BRWD1Q9NSI6 2320 aa11.16□□□□□ -0.62
RPA1-206ENST00000573994 MYH9P35579 1960 aaKnown RBP11.16□□□□□ -0.62
RPA1-206ENST00000573994 A0A087WWV3 80 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms