RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 UBA7P41226 1012 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 RABGGTBP53611 331 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 LAMTOR4Q0VGL1 99 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 NFX1Q12986 1120 aaKnown RBP10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 TMEM119Q4V9L6 283 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 ODR4Q5SWX8 454 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 PADI6Q6TGC4 694 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 FAM43BQ6ZT52 329 aaPredicted RBP10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 KCNK18Q7Z418 384 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 TMCO2Q7Z6W1 182 aaPredicted RBP10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 RTN4RL1Q86UN2 441 aaPredicted RBP10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 CABP7Q86V35 215 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 MYOCDQ8IZQ8 938 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 KCTD17Q8N5Z5 321 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 LINC00301Q8NCQ3 95 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 MCPH1Q8NEM0 835 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 LINC01599Q8WXQ3 324 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 FDXACB1Q9BRP7 624 aaPredicted RBP10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 GCOM2Q9BZD3 368 aaPredicted RBP10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 NT5C3AQ9H0P0 336 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 CSRNP2Q9H175 543 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 IFT122Q9HBG6 1241 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 TFIP11Q9UBB9 837 aaKnown RBP10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 DNM3Q9UQ16 869 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 ZDHHC9Q9Y397 364 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 MICAL3Q7RTP6 2002 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 PTPRSQ13332 1948 aa10.66□□□□□ -0.7
HCCAT5-201ENST00000569990 MYH15Q9Y2K3 1946 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 MGEA5O60502 916 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 CSDE1O75534 798 aaKnown RBP10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 GJB5O95377 273 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 YEATS4O95619 227 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 CHRM1P11229 460 aaPredicted RBP10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 GLRA2P23416 452 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 MXD4Q14582 209 aaPredicted RBP10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 STK38Q15208 465 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 ZRSR1Q15695 479 aaKnown RBP10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 RAB30Q15771 203 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 FOXD4L6Q3SYB3 417 aaPredicted RBP10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 ATL3Q6DD88 541 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 FOXD4L3Q6VB84 417 aaPredicted RBP10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 MAEAQ7L5Y9 396 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 RNF149Q8NC42 400 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 TOP1MTQ969P6 601 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 TIFAQ96CG3 184 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 CDK5RAP3Q96JB5 506 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 CLIC6Q96NY7 704 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 PLIN2Q99541 437 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 CCSER1Q9C0I3 900 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 POLR3FQ9H1D9 316 aaPredicted RBP10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 GPRC5CQ9NQ84 441 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 DAXXQ9UER7 740 aaPredicted RBP10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 MSRAQ9UJ68 235 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 YBX2Q9Y2T7 364 aaKnown RBP10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 PCDHA11Q9Y5I1 949 aa10.65□□□□□ -0.7
HCCAT5-201ENST00000569990 LOXHD1Q8IVV2 1947 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 TMEM265A0A087WTH1 108 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 SPTLC2O15270 562 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 TLL1O43897 1013 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 PPP6R2O75170 966 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 SRGAP2CP0DJJ0 459 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 MYOGP15173 224 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 FGFR4P22455 802 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 POU5F1BQ06416 359 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 CAPSQ13938 189 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 DSC3Q14574 896 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 SPECC1Q5M775 1068 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 USP49Q70CQ1 688 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 SRGAP1Q7Z6B7 1085 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 KRI1Q8N9T8 703 aaKnown RBP10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 ASAP3Q8TDY4 903 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 LRRC15Q8TF66 581 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 CALML4Q96GE6 196 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 EPSTI1Q96J88 318 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 ADAM2Q99965 735 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 ZBED2Q9BTP6 218 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 INO80BQ9C086 356 aaPredicted RBP10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 MINDY3Q9H8M7 445 aa10.64□□□□□ -0.71
HCCAT5-201ENST00000569990 DENND3A2RUS2 1198 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 UPP2O95045 317 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 CA3P07451 260 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 PLCG1P19174 1290 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 SFPQP23246 707 aaKnown RBP eCLIP10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 DDIT3P35638 169 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 PHKA2P46019 1235 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 SLC12A3P55017 1021 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 PTENP60484 403 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 HTRA4P83105 476 aaPredicted RBP10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 DNM1Q05193 864 aaKnown RBP10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 TFDP1Q14186 410 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 KARSQ15046 597 aaKnown RBP10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 FAM102BQ5T8I3 360 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 RINT1Q6NUQ1 792 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 FAM117BQ6P1L5 589 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 SLC24A5Q71RS6 500 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 Q7L0L9 218 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 DAW1Q8N136 415 aa10.63□□□□□ -0.71
HCCAT5-201ENST00000569990 CRIPAKQ8N1N5 446 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms