RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 SFPQP23246 707 aaKnown RBP eCLIP22.48■■□□□ 1.19
ABCA3-206ENST00000569062 U2AF2P26368 475 aaKnown RBP eCLIP22.48■■□□□ 1.19
ABCA3-206ENST00000569062 PIGOQ8TEQ8 1089 aa22.48■■□□□ 1.19
ABCA3-206ENST00000569062 PSPC1Q8WXF1 523 aaKnown RBP22.48■■□□□ 1.19
ABCA3-206ENST00000569062 P2RX5Q93086 422 aa22.48■■□□□ 1.19
ABCA3-206ENST00000569062 MTRQ99707 1265 aa22.48■■□□□ 1.19
ABCA3-206ENST00000569062 INO80BQ9C086 356 aaPredicted RBP22.48■■□□□ 1.19
ABCA3-206ENST00000569062 XPNPEP1Q9NQW7 623 aa22.48■■□□□ 1.19
ABCA3-206ENST00000569062 PLAGL2Q9UPG8 496 aa22.48■■□□□ 1.19
ABCA3-206ENST00000569062 MUC3AQ02505 3323 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 ITGB1P05556 798 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 SRGAP2CP0DJJ0 459 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 SPATA31C1P0DKV0 1188 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 LAMTOR4Q0VGL1 99 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 ORC2Q13416 577 aaPredicted RBP22.47■■□□□ 1.19
ABCA3-206ENST00000569062 TIGD5Q53EQ6 642 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 TCEAL5Q5H9L2 206 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 KLHL23Q8NBE8 558 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 RNF169Q8NCN4 708 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 IL27Q8NEV9 243 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 LMAN2LQ9H0V9 348 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 CHST12Q9NRB3 414 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 ANKEF1Q9NU02 776 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 TYW1Q9NV66 732 aaKnown RBP22.47■■□□□ 1.19
ABCA3-206ENST00000569062 MYO7AQ13402 2215 aa22.47■■□□□ 1.19
ABCA3-206ENST00000569062 A0A0U1RQF3 1178 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 GAS2O43903 313 aaKnown RBP22.46■■□□□ 1.19
ABCA3-206ENST00000569062 MED24O75448 989 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 BMP1P13497 986 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 DNAJB1P25685 340 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 GJB2P29033 226 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 TRAPPC10P48553 1259 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 RARRES1P49788 294 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 TOB1P50616 345 aaPredicted RBP22.46■■□□□ 1.19
ABCA3-206ENST00000569062 CAMK1Q14012 370 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 AAK1Q2M2I8 961 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 SPOUT1Q5T280 376 aaKnown RBP22.46■■□□□ 1.19
ABCA3-206ENST00000569062 CATSPER4Q7RTX7 472 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 FERMT3Q86UX7 667 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 CATSPER3Q86XQ3 398 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 C4orf32Q8N8J7 132 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 TCP11Q8WWU5 503 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 CASD1Q96PB1 797 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 NSUN3Q9H649 340 aaKnown RBP22.46■■□□□ 1.19
ABCA3-206ENST00000569062 CWH43Q9H720 699 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 MINDY3Q9H8M7 445 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 DACT1Q9NYF0 836 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 NOL7Q9UMY1 257 aaKnown RBP22.46■■□□□ 1.19
ABCA3-206ENST00000569062 PIN4Q9Y237 131 aaKnown RBP22.46■■□□□ 1.19
ABCA3-206ENST00000569062 BRWD1Q9NSI6 2320 aa22.46■■□□□ 1.19
ABCA3-206ENST00000569062 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.45■■□□□ 1.18
ABCA3-206ENST00000569062 ATF7P17544 494 aaPredicted RBP22.45■■□□□ 1.18
ABCA3-206ENST00000569062 NAALADL2Q58DX5 795 aa22.45■■□□□ 1.18
ABCA3-206ENST00000569062 LRRC55Q6ZSA7 311 aa22.45■■□□□ 1.18
ABCA3-206ENST00000569062 ZNF598Q86UK7 904 aaKnown RBP22.45■■□□□ 1.18
ABCA3-206ENST00000569062 SPPL3Q8TCT6 385 aa22.45■■□□□ 1.18
ABCA3-206ENST00000569062 ADAMTS19Q8TE59 1207 aa22.45■■□□□ 1.18
ABCA3-206ENST00000569062 TMEM117Q9H0C3 514 aa22.45■■□□□ 1.18
ABCA3-206ENST00000569062 UBE2ZQ9H832 354 aaPredicted RBP22.45■■□□□ 1.18
ABCA3-206ENST00000569062 PCDHB6Q9Y5E3 794 aa22.45■■□□□ 1.18
ABCA3-206ENST00000569062 MCM2P49736 904 aa22.44■■□□□ 1.18
ABCA3-206ENST00000569062 CLLU1OSQ5K130 101 aa22.44■■□□□ 1.18
ABCA3-206ENST00000569062 TWF2Q6IBS0 349 aaKnown RBP22.44■■□□□ 1.18
ABCA3-206ENST00000569062 RNF149Q8NC42 400 aa22.44■■□□□ 1.18
ABCA3-206ENST00000569062 TUFT1Q9NNX1 390 aa22.44■■□□□ 1.18
ABCA3-206ENST00000569062 KIF3AQ9Y496 699 aa22.44■■□□□ 1.18
ABCA3-206ENST00000569062 ASAP2O43150 1006 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 HOXA2O43364 376 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 DGAT1O75907 488 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 EOMESO95936 686 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 PHKA2P46019 1235 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 MCTP1Q6DN14 999 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 SRGAP1Q7Z6B7 1085 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 COLGALT1Q8NBJ5 622 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 HELQQ8TDG4 1101 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 POF1BQ8WVV4 589 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 CCDC43Q96MW1 224 aaKnown RBP22.43■■□□□ 1.18
ABCA3-206ENST00000569062 POLR3CQ9BUI4 534 aaPredicted RBP22.43■■□□□ 1.18
ABCA3-206ENST00000569062 AGPAT5Q9NUQ2 364 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 PCDHB12Q9Y5F1 795 aa22.43■■□□□ 1.18
ABCA3-206ENST00000569062 XRCC6P12956 609 aaKnown RBP eCLIP22.42■■□□□ 1.18
ABCA3-206ENST00000569062 IRS1P35568 1242 aa22.42■■□□□ 1.18
ABCA3-206ENST00000569062 PTGDRQ13258 359 aa22.42■■□□□ 1.18
ABCA3-206ENST00000569062 LONRF3Q496Y0 759 aa22.42■■□□□ 1.18
ABCA3-206ENST00000569062 POTEGQ6S5H5 508 aa22.42■■□□□ 1.18
ABCA3-206ENST00000569062 ABI1Q8IZP0 508 aa22.42■■□□□ 1.18
ABCA3-206ENST00000569062 ASAP3Q8TDY4 903 aa22.42■■□□□ 1.18
ABCA3-206ENST00000569062 LPPQ93052 612 aa22.42■■□□□ 1.18
ABCA3-206ENST00000569062 NECAB3Q96P71 396 aaPredicted RBP22.42■■□□□ 1.18
ABCA3-206ENST00000569062 TRAIPQ9BWF2 469 aa22.42■■□□□ 1.18
ABCA3-206ENST00000569062 AAASQ9NRG9 546 aa22.42■■□□□ 1.18
ABCA3-206ENST00000569062 USO1O60763 962 aaKnown RBP22.41■■□□□ 1.18
ABCA3-206ENST00000569062 KCNA5P22460 613 aa22.41■■□□□ 1.18
ABCA3-206ENST00000569062 RPA1P27694 616 aa22.41■■□□□ 1.18
ABCA3-206ENST00000569062 ARL2P36404 184 aa22.41■■□□□ 1.18
ABCA3-206ENST00000569062 FXR2P51116 673 aaKnown RBP eCLIP22.41■■□□□ 1.18
ABCA3-206ENST00000569062 MXD4Q14582 209 aaPredicted RBP22.41■■□□□ 1.18
ABCA3-206ENST00000569062 ERMNQ8TAM6 284 aa22.41■■□□□ 1.18
ABCA3-206ENST00000569062 UHRF1Q96T88 793 aaPredicted RBP22.41■■□□□ 1.18
ABCA3-206ENST00000569062 FAM105AQ9NUU6 356 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms