RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 P4HBP07237 508 aaKnown RBP10.78□□□□□ -0.68
UBFD1-203ENST00000564106 SUPT20HL2P0C7V6 817 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 SPATA31C1P0DKV0 1188 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 CASP1P29466 404 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 WDR5P61964 334 aaKnown RBP10.78□□□□□ -0.68
UBFD1-203ENST00000564106 RBL2Q08999 1139 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 LAMC2Q13753 1193 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 ZNF746Q6NUN9 644 aaPredicted RBP10.78□□□□□ -0.68
UBFD1-203ENST00000564106 FOXR2Q6PJQ5 311 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 POTEGQ6S5H5 508 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 LRRC8DQ7L1W4 858 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 CYFIP1Q7L576 1253 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 ADSSL1Q8N142 457 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 SYT2Q8N9I0 419 aaPredicted RBP10.78□□□□□ -0.68
UBFD1-203ENST00000564106 NOC3LQ8WTT2 800 aaKnown RBP10.78□□□□□ -0.68
UBFD1-203ENST00000564106 DDX12PQ92771 950 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 GJA10Q969M2 543 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 GPR20Q99678 358 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 COL4A6Q14031 1691 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 BDP1A6H8Y1 2624 aa10.78□□□□□ -0.68
UBFD1-203ENST00000564106 TCF20Q9UGU0 1960 aaKnown RBP10.77□□□□□ -0.68
UBFD1-203ENST00000564106 ARID2Q68CP9 1835 aa10.77□□□□□ -0.68
UBFD1-203ENST00000564106 PPP1R3GB7ZBB8 358 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 E9PMD0 336 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 TREHO43280 583 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 LPXNO60711 386 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 SERPINC1P01008 464 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 CXCL10P02778 98 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 SMIM10L2AP0DMW4 78 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 SMIM10L2BP0DMW5 78 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 IDEP14735 1019 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 SELPP16109 830 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 CDK11BP21127 795 aaKnown RBP10.77□□□□□ -0.69
UBFD1-203ENST00000564106 ICAM3P32942 547 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 SLC12A3P55017 1021 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 SP4Q02446 784 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 TAP1Q03518 808 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 RAB30Q15771 203 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 BRDTQ58F21 947 aaPredicted RBP10.77□□□□□ -0.69
UBFD1-203ENST00000564106 PPP2R2DQ66LE6 453 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 KLHL10Q6JEL2 608 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 KCNV1Q6PIU1 500 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.77□□□□□ -0.69
UBFD1-203ENST00000564106 GPBP1Q86WP2 473 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 HERC6Q8IVU3 1022 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 FAM114A1Q8IWE2 563 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 DRC7Q8IY82 874 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 RPUSD2Q8IZ73 545 aaKnown RBP10.77□□□□□ -0.69
UBFD1-203ENST00000564106 GUF1Q8N442 669 aaKnown RBP10.77□□□□□ -0.69
UBFD1-203ENST00000564106 LRRC15Q8TF66 581 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 CCDC43Q96MW1 224 aaKnown RBP10.77□□□□□ -0.69
UBFD1-203ENST00000564106 SENP7Q9BQF6 1050 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 LXNQ9BS40 222 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 UNC45AQ9H3U1 944 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 ZSWIM4Q9H7M6 989 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 PKD2L1Q9P0L9 805 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 MSRAQ9UJ68 235 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 CTNND2Q9UQB3 1225 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 SAMM50Q9Y512 469 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 PCDHA11Q9Y5I1 949 aa10.77□□□□□ -0.69
UBFD1-203ENST00000564106 MYH9P35579 1960 aaKnown RBP10.76□□□□□ -0.69
UBFD1-203ENST00000564106 EML1O00423 815 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 DHX15O43143 795 aaKnown RBP10.76□□□□□ -0.69
UBFD1-203ENST00000564106 TBCAO75347 108 aaKnown RBP10.76□□□□□ -0.69
UBFD1-203ENST00000564106 SLITRK3O94933 977 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 LYPLA2O95372 231 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 FGFR1OPO95684 399 aaKnown RBP10.76□□□□□ -0.69
UBFD1-203ENST00000564106 TGFB3P10600 412 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 KCNA2P16389 499 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 GAP43P17677 238 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 CYP11B2P19099 503 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 IGFBP4P22692 258 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 PRCPP42785 496 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 QARSP47897 775 aaKnown RBP10.76□□□□□ -0.69
UBFD1-203ENST00000564106 FANCCQ00597 558 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 CYP4A11Q02928 519 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 LRRC63Q05C16 580 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 ECM1Q16610 540 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 FILIP1LQ4L180 1135 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 FAM26FQ5R3K3 315 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 RUFY4Q6ZNE9 571 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 DYMQ7RTS9 669 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 KCNK18Q7Z418 384 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 SERINC5Q86VE9 423 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 TPH2Q8IWU9 490 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 C7orf31Q8N865 590 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 AFAP1L1Q8TED9 768 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 NELFBQ8WX92 580 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 ATP6V0A1Q93050 837 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 DNAJC19Q96DA6 116 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 DYDC2Q96IM9 177 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 PCYT2Q99447 389 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 TIPINQ9BVW5 301 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 RNPEPQ9H4A4 650 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 SLC28A3Q9HAS3 691 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 PANK4Q9NVE7 773 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 FANCLQ9NW38 375 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 IMPACTQ9P2X3 320 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 SEL1LQ9UBV2 794 aa10.76□□□□□ -0.69
UBFD1-203ENST00000564106 DBR1Q9UK59 544 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms