RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 APTXQ7Z2E3 356 aaKnown RBP11.66□□□□□ -0.54
CRTC3-209ENST00000560320 HAUS6Q7Z4H7 955 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 FRMD5Q7Z6J6 570 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 LRRC8AQ8IWT6 810 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 ZC3H3Q8IXZ2 948 aaKnown RBP11.66□□□□□ -0.54
CRTC3-209ENST00000560320 CCDC112Q8NEF3 446 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 PPTC7Q8NI37 304 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 TCP11Q8WWU5 503 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 EMID1Q96A84 441 aaPredicted RBP11.66□□□□□ -0.54
CRTC3-209ENST00000560320 IQCDQ96DY2 449 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 PCYT2Q99447 389 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 NUP58Q9BVL2 599 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 INTS13Q9NVM9 706 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 ERAP1Q9NZ08 941 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 FAM184BQ9ULE4 1060 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 TELO2Q9Y4R8 837 aa11.66□□□□□ -0.54
CRTC3-209ENST00000560320 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.66□□□□□ -0.54
CRTC3-209ENST00000560320 VCANP13611 3396 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 AKR1B15C9JRZ8 316 aaPredicted RBP11.65□□□□□ -0.54
CRTC3-209ENST00000560320 SLC16A4O15374 487 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 ATP4AP20648 1035 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 MARK3P27448 753 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 PSMC2P35998 433 aaKnown RBP11.65□□□□□ -0.54
CRTC3-209ENST00000560320 GTF2BQ00403 316 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 MYBPC2Q14324 1141 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 PLCB4Q15147 1175 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 DGKDQ16760 1214 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 ZNF484Q5JVG2 852 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 IER5Q5VY09 327 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 CEP135Q66GS9 1140 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 DEPTORQ8TB45 409 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 AFG1LQ8WV93 481 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 ZNF830Q96NB3 372 aaPredicted RBP11.65□□□□□ -0.54
CRTC3-209ENST00000560320 FIZ1Q96SL8 496 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 AP5M1Q9H0R1 490 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 NDST4Q9H3R1 872 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 DHX33Q9H6R0 707 aaKnown RBP11.65□□□□□ -0.54
CRTC3-209ENST00000560320 GPRC5CQ9NQ84 441 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 PDLIM7Q9NR12 457 aa11.65□□□□□ -0.54
CRTC3-209ENST00000560320 ARMCX3Q9UH62 379 aaPredicted RBP11.65□□□□□ -0.54
CRTC3-209ENST00000560320 PHLPP2Q6ZVD8 1323 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 DENND3A2RUS2 1198 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 CLIC2O15247 247 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 PPFIA4O75335 1185 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 PPP1R37O75864 691 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 LGALS2P05162 132 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 KRT13P13646 458 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 NAMPTP43490 491 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 PSMC4P43686 418 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 NPTX2P47972 431 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 MARSP56192 900 aaKnown RBP11.64□□□□□ -0.55
CRTC3-209ENST00000560320 STRN3Q13033 797 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 TARBP2Q15633 366 aaKnown RBP11.64□□□□□ -0.55
CRTC3-209ENST00000560320 MFSD14CQ5VZR4 134 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 ARMCX5Q6P1M9 558 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 CNGA4Q8IV77 575 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 FAM186BQ8IYM0 893 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 RETREG2Q8NC44 543 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 CACTINQ8WUQ7 758 aaKnown RBP11.64□□□□□ -0.55
CRTC3-209ENST00000560320 USP6NLQ92738 828 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 CCDC51Q96ER9 411 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 BICD1Q96G01 975 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 EEF2KMTQ96G04 330 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 NTPCRQ9BSD7 190 aaKnown RBP11.64□□□□□ -0.55
CRTC3-209ENST00000560320 MKNK1Q9BUB5 465 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 STRA6Q9BX79 667 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 KATNBL1Q9H079 304 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 XPNPEP1Q9NQW7 623 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 AGPAT3Q9NRZ7 376 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 TBX20Q9UMR3 447 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 SIP14410 1827 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 COL1A2P08123 1366 aa11.64□□□□□ -0.55
CRTC3-209ENST00000560320 LAMA3Q16787 3333 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 LRRIQ4A6NIV6 560 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 MAGEB2O15479 319 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 TGFB1I1O43294 461 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 EXOC3O60645 756 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 MAFO75444 373 aaPredicted RBP11.63□□□□□ -0.55
CRTC3-209ENST00000560320 SKILP12757 684 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 XRCC5P13010 732 aaKnown RBP11.63□□□□□ -0.55
CRTC3-209ENST00000560320 SMPD1P17405 629 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 HOXD10P28358 340 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 HOXD13P35453 343 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 PBX1P40424 430 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 CYP2J2P51589 502 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 TBX2Q13207 712 aaPredicted RBP11.63□□□□□ -0.55
CRTC3-209ENST00000560320 TFDP1Q14186 410 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 MXD4Q14582 209 aaPredicted RBP11.63□□□□□ -0.55
CRTC3-209ENST00000560320 GJC2Q5T442 439 aaPredicted RBP11.63□□□□□ -0.55
CRTC3-209ENST00000560320 TCERG1LQ5VWI1 586 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 TRIM50Q86XT4 487 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 SLC9A9Q8IVB4 645 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 ZBTB8OSQ8IWT0 167 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 TMEM161BQ8NDZ6 487 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 ZNF397Q8NF99 534 aaPredicted RBP11.63□□□□□ -0.55
CRTC3-209ENST00000560320 PSPC1Q8WXF1 523 aaKnown RBP11.63□□□□□ -0.55
CRTC3-209ENST00000560320 TMEM143Q96AN5 459 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 ERGIC2Q96RQ1 377 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 ZMYM2Q9UBW7 1377 aa11.63□□□□□ -0.55
CRTC3-209ENST00000560320 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms