RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 NCKAP1LP55160 1127 aa14.21□□□□□ -0.13
SMAD3-207ENST00000558763 PRKCEQ02156 737 aa14.21□□□□□ -0.13
SMAD3-207ENST00000558763 PRAMEF19Q5SWL8 479 aa14.21□□□□□ -0.13
SMAD3-207ENST00000558763 OLFML2BQ68BL8 750 aa14.21□□□□□ -0.13
SMAD3-207ENST00000558763 ACRBPQ8NEB7 543 aa14.21□□□□□ -0.13
SMAD3-207ENST00000558763 TMEM174Q8WUU8 243 aa14.21□□□□□ -0.13
SMAD3-207ENST00000558763 SLC35C1Q96A29 364 aa14.21□□□□□ -0.13
SMAD3-207ENST00000558763 IQCDQ96DY2 449 aa14.21□□□□□ -0.13
SMAD3-207ENST00000558763 PCYT2Q99447 389 aa14.21□□□□□ -0.13
SMAD3-207ENST00000558763 LARSQ9P2J5 1176 aaKnown RBP14.21□□□□□ -0.13
SMAD3-207ENST00000558763 FAM184BQ9ULE4 1060 aa14.21□□□□□ -0.13
SMAD3-207ENST00000558763 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMAD3-207ENST00000558763 MAFBQ9Y5Q3 323 aaPredicted RBP14.21□□□□□ -0.13
SMAD3-207ENST00000558763 BRCA2P51587 3418 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 K7ENM7 598 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 KIF2AO00139 706 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-207ENST00000558763 RIOK3O14730 519 aaKnown RBP14.2□□□□□ -0.14
SMAD3-207ENST00000558763 ARIH2O95376 493 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 XRCC5P13010 732 aaKnown RBP14.2□□□□□ -0.14
SMAD3-207ENST00000558763 ELNP15502 786 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 HOXD10P28358 340 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.14
SMAD3-207ENST00000558763 ETF1P62495 437 aaKnown RBP14.2□□□□□ -0.14
SMAD3-207ENST00000558763 GTF2BQ00403 316 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 KCNH2Q12809 1159 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 LY6KQ17RY6 165 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 TMEM63BQ5T3F8 832 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 TRMT1LQ7Z2T5 733 aaKnown RBP14.2□□□□□ -0.14
SMAD3-207ENST00000558763 MSL3Q8N5Y2 521 aaKnown RBP14.2□□□□□ -0.14
SMAD3-207ENST00000558763 BSNDQ8WZ55 320 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 CEP89Q96ST8 783 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 KATNBL1Q9H079 304 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 GBP3Q9H0R5 595 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 ABHD16BQ9H3Z7 469 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 VTA1Q9NP79 307 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 ARMCX3Q9UH62 379 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-207ENST00000558763 TRIM17Q9Y577 477 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 PCDHB13Q9Y5F0 798 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 GSTTP1A0A1W2PQM5 241 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 TISP43B9A030 160 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 CCDC175P0C221 793 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 RPL13P26373 211 aaKnown RBP14.2□□□□□ -0.14
SMAD3-207ENST00000558763 ADCYAP1R1P41586 468 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 SOX10P56693 466 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 CDK17Q00537 523 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 APBA1Q02410 837 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 ACVR2BQ13705 512 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 TAPT1Q6NXT6 567 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 SLC9A9Q8IVB4 645 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 RAET1EQ8TD07 263 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 DRC1Q96MC2 740 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 MKNK1Q9BUB5 465 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 PLAGL2Q9UPG8 496 aa14.2□□□□□ -0.14
SMAD3-207ENST00000558763 GNRH1P01148 92 aa14.19□□□□□ -0.14
SMAD3-207ENST00000558763 TXNP10599 105 aaKnown RBP14.19□□□□□ -0.14
SMAD3-207ENST00000558763 ALCAMQ13740 583 aa14.19□□□□□ -0.14
SMAD3-207ENST00000558763 ARHGEF6Q15052 776 aa14.19□□□□□ -0.14
SMAD3-207ENST00000558763 MIS18BP1Q6P0N0 1132 aa14.19□□□□□ -0.14
SMAD3-207ENST00000558763 SYT10Q6XYQ8 523 aa14.19□□□□□ -0.14
SMAD3-207ENST00000558763 STXBP4Q6ZWJ1 553 aa14.19□□□□□ -0.14
SMAD3-207ENST00000558763 SCFD2Q8WU76 684 aa14.19□□□□□ -0.14
SMAD3-207ENST00000558763 GANQ9H2C0 597 aa14.19□□□□□ -0.14
SMAD3-207ENST00000558763 MMRN2Q9H8L6 949 aa14.19□□□□□ -0.14
SMAD3-207ENST00000558763 ADGRA3Q8IWK6 1321 aa14.19□□□□□ -0.14
SMAD3-207ENST00000558763 UQCRHLA0A096LP55 91 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 GOLGA6L9A6NEM1 432 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 NDUFA10O95299 355 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 UQCRHP07919 91 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 TGFB3P10600 412 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 ARHGAP25P42331 645 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 NPTX2P47972 431 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 PEX3P56589 373 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 TRIM32Q13049 653 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 TTLL4Q14679 1199 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 GJC2Q5T442 439 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-207ENST00000558763 HAUS6Q7Z4H7 955 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 C12orf56Q8IXR9 622 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 TMEM161BQ8NDZ6 487 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 COPS5Q92905 334 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 CEP170P1Q96L14 293 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 PCMTD1Q96MG8 357 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-207ENST00000558763 CCDC43Q96MW1 224 aaKnown RBP14.18□□□□□ -0.14
SMAD3-207ENST00000558763 CRACR2AQ9BSW2 395 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 EDEM3Q9BZQ6 932 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 CYP26B1Q9NR63 512 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 DDX41Q9UJV9 622 aaKnown RBP14.18□□□□□ -0.14
SMAD3-207ENST00000558763 PAXBP1Q9Y5B6 917 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 EPN1Q9Y6I3 576 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-207ENST00000558763 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-207ENST00000558763 LRRC53A6NM62 1247 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 SLC16A4O15374 487 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 ADCY3O60266 1144 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 DKC1O60832 514 aaKnown RBP eCLIP14.18□□□□□ -0.14
SMAD3-207ENST00000558763 GGPS1O95749 300 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 ABL1P00519 1130 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 EPB41P11171 864 aaKnown RBP14.18□□□□□ -0.14
SMAD3-207ENST00000558763 PPP2R3AQ06190 1150 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 IRF5Q13568 498 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 XKR3Q5GH77 459 aa14.18□□□□□ -0.14
SMAD3-207ENST00000558763 FAM102BQ5T8I3 360 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms