RNA–Protein interactions for RNA: ENST00000558415.5

SPG21-206, Transcript of SPG21, maspardin, humanhuman

TSL 3

Gene SPG21, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-206ENST00000558415 ECHDC2Q86YB7 292 aa16■□□□□ 0.15
SPG21-206ENST00000558415 KLHL23Q8NBE8 558 aa16■□□□□ 0.15
SPG21-206ENST00000558415 PRPF31Q8WWY3 499 aaKnown RBP16■□□□□ 0.15
SPG21-206ENST00000558415 P2RX5Q93086 422 aa16■□□□□ 0.15
SPG21-206ENST00000558415 TMX3Q96JJ7 454 aa16■□□□□ 0.15
SPG21-206ENST00000558415 TBC1D32Q96NH3 1257 aa16■□□□□ 0.15
SPG21-206ENST00000558415 NSUN3Q9H649 340 aaKnown RBP16■□□□□ 0.15
SPG21-206ENST00000558415 UPF2Q9HAU5 1272 aaKnown RBP16■□□□□ 0.15
SPG21-206ENST00000558415 IFT122Q9HBG6 1241 aa16■□□□□ 0.15
SPG21-206ENST00000558415 XPNPEP1Q9NQW7 623 aa16■□□□□ 0.15
SPG21-206ENST00000558415 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
SPG21-206ENST00000558415 PLAGL2Q9UPG8 496 aa16■□□□□ 0.15
SPG21-206ENST00000558415 A0A087WWV3 80 aa15.99■□□□□ 0.15
SPG21-206ENST00000558415 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.99■□□□□ 0.15
SPG21-206ENST00000558415 ATF7P17544 494 aaPredicted RBP15.99■□□□□ 0.15
SPG21-206ENST00000558415 SFPQP23246 707 aaKnown RBP eCLIP15.99■□□□□ 0.15
SPG21-206ENST00000558415 DNAJB1P25685 340 aa15.99■□□□□ 0.15
SPG21-206ENST00000558415 LAMTOR4Q0VGL1 99 aa15.99■□□□□ 0.15
SPG21-206ENST00000558415 TTC38Q5R3I4 469 aa15.99■□□□□ 0.15
SPG21-206ENST00000558415 ZNF598Q86UK7 904 aaKnown RBP15.99■□□□□ 0.15
SPG21-206ENST00000558415 RNF169Q8NCN4 708 aa15.99■□□□□ 0.15
SPG21-206ENST00000558415 IL27Q8NEV9 243 aa15.99■□□□□ 0.15
SPG21-206ENST00000558415 NEK9Q8TD19 979 aa15.99■□□□□ 0.15
SPG21-206ENST00000558415 NECAB3Q96P71 396 aaPredicted RBP15.99■□□□□ 0.15
SPG21-206ENST00000558415 CASD1Q96PB1 797 aa15.99■□□□□ 0.15
SPG21-206ENST00000558415 LMAN2LQ9H0V9 348 aa15.99■□□□□ 0.15
SPG21-206ENST00000558415 UBE2ZQ9H832 354 aaPredicted RBP15.99■□□□□ 0.15
SPG21-206ENST00000558415 MINDY3Q9H8M7 445 aa15.99■□□□□ 0.15
SPG21-206ENST00000558415 TYW1Q9NV66 732 aaKnown RBP15.99■□□□□ 0.15
SPG21-206ENST00000558415 A0A0U1RQF3 1178 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 OR52Z1P0C646 297 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 SRGAP2CP0DJJ0 459 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 SPATA31C1P0DKV0 1188 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 U2AF2P26368 475 aaKnown RBP eCLIP15.98■□□□□ 0.15
SPG21-206ENST00000558415 CLLU1OSQ5K130 101 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 LRRC55Q6ZSA7 311 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 CATSPER4Q7RTX7 472 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 FERMT3Q86UX7 667 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 EXOC8Q8IYI6 725 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 SPPL3Q8TCT6 385 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 PIGOQ8TEQ8 1089 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 PSPC1Q8WXF1 523 aaKnown RBP15.98■□□□□ 0.15
SPG21-206ENST00000558415 UHRF1Q96T88 793 aaPredicted RBP15.98■□□□□ 0.15
SPG21-206ENST00000558415 MTRQ99707 1265 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 TMEM117Q9H0C3 514 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 CWH43Q9H720 699 aa15.98■□□□□ 0.15
SPG21-206ENST00000558415 PIN4Q9Y237 131 aaKnown RBP15.98■□□□□ 0.15
SPG21-206ENST00000558415 MED24O75448 989 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 KCNA5P22460 613 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 TECP42680 631 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 RARRES1P49788 294 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 TOB1P50616 345 aaPredicted RBP15.97■□□□□ 0.15
SPG21-206ENST00000558415 ORC2Q13416 577 aaPredicted RBP15.97■□□□□ 0.15
SPG21-206ENST00000558415 NAALADL2Q58DX5 795 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 SPOUT1Q5T280 376 aaKnown RBP15.97■□□□□ 0.15
SPG21-206ENST00000558415 CATSPER3Q86XQ3 398 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 C4orf32Q8N8J7 132 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 COLGALT1Q8NBJ5 622 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 HELQQ8TDG4 1101 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 TCP11Q8WWU5 503 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 INO80BQ9C086 356 aaPredicted RBP15.97■□□□□ 0.15
SPG21-206ENST00000558415 CHST12Q9NRB3 414 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 ANKEF1Q9NU02 776 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 DACT1Q9NYF0 836 aa15.97■□□□□ 0.15
SPG21-206ENST00000558415 HOXA2O43364 376 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 GAS2O43903 313 aaKnown RBP15.96■□□□□ 0.15
SPG21-206ENST00000558415 GTF2F1P35269 517 aaKnown RBP eCLIP15.96■□□□□ 0.15
SPG21-206ENST00000558415 IRS1P35568 1242 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 PHKA2P46019 1235 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 TRAPPC10P48553 1259 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 HYAL1Q12794 435 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 COL19A1Q14993 1142 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 TWF2Q6IBS0 349 aaKnown RBP15.96■□□□□ 0.15
SPG21-206ENST00000558415 RNF149Q8NC42 400 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 ASAP3Q8TDY4 903 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 POF1BQ8WVV4 589 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 LPPQ93052 612 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 NOL7Q9UMY1 257 aaKnown RBP15.96■□□□□ 0.15
SPG21-206ENST00000558415 PCDHB12Q9Y5F1 795 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 PCDHGC5Q9Y5F6 944 aa15.96■□□□□ 0.15
SPG21-206ENST00000558415 MEIS3P2A8K0S8 358 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 TNFRSF10AO00220 468 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 DGAT1O75907 488 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 EOMESO95936 686 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 GJB2P29033 226 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 PBX3P40426 434 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 LONRF3Q496Y0 759 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 POTEGQ6S5H5 508 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 SRGAP1Q7Z6B7 1085 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 ABI1Q8IZP0 508 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 LRRC43Q8N309 656 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 PABPC5Q96DU9 382 aaKnown RBP15.95■□□□□ 0.14
SPG21-206ENST00000558415 CCDC43Q96MW1 224 aaKnown RBP15.95■□□□□ 0.14
SPG21-206ENST00000558415 POLR3CQ9BUI4 534 aaPredicted RBP15.95■□□□□ 0.14
SPG21-206ENST00000558415 TRAIPQ9BWF2 469 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 TUFT1Q9NNX1 390 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 AAASQ9NRG9 546 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 AGPAT5Q9NUQ2 364 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 PCDHB6Q9Y5E3 794 aa15.95■□□□□ 0.14
SPG21-206ENST00000558415 H3BQ06 376 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms