RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GPR32O75388 356 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 FOSP01100 380 aaPredicted RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 ARP10275 920 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 CTSAP10619 480 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 EPCAMP16422 314 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 EIF4BP23588 611 aaKnown RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 KLRC2P26717 231 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 PBX3P40426 434 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 METAP2P50579 478 aaKnown RBP eCLIP5.89□□□□□ -1.47
SPG11-208ENST00000558155 NLRP11P59045 1033 aaKnown RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 RSPO4Q2I0M5 234 aaPredicted RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 LETM2Q2VYF4 491 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 CEP55Q53EZ4 464 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 SWSAP1Q6NVH7 229 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 KANK3Q6NY19 840 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 MIS18BP1Q6P0N0 1132 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 ELMSAN1Q6PJG2 1045 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 ABHD15Q6UXT9 468 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 TMC5Q6UXY8 1006 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 CYP26C1Q6V0L0 522 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 TEX2Q8IWB9 1127 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 ZNF454Q8N9F8 522 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 IGDCC4Q8TDY8 1250 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 BBXQ8WY36 941 aaPredicted RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 RIN2Q8WYP3 895 aaPredicted RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 STAMQ92783 540 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 SECISBP2LQ93073 1101 aaKnown RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 MAP7D2Q96T17 732 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 PPP1R16BQ96T49 567 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 OSBPL3Q9H4L5 887 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 SFXN1Q9H9B4 322 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 SENP2Q9HC62 589 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 AGO4Q9HCK5 861 aaKnown RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 RNF19AQ9NV58 838 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 DPP7Q9UHL4 492 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 CEP131Q9UPN4 1083 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 SIT1Q9Y3P8 196 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 LAMA4Q16363 1823 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 WDFY4Q6ZS81 3184 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 CACNA1AO00555 2505 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 KRBA1A5PL33 1030 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 PRR5-ARHGAP8B1AHC4 643 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 MEIS1O00470 390 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 KINO60870 393 aaKnown RBP5.88□□□□□ -1.47
SPG11-208ENST00000558155 DDAH1O94760 285 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 VTNP04004 478 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 ALDH2P05091 517 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 GALTP07902 379 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 CFHP08603 1231 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 SP9P0CG40 484 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 CALM1P0DP23 149 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 CALM2P0DP24 149 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 CALM3P0DP25 149 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 SKIP12755 728 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 GBP2P32456 591 aaPredicted RBP5.88□□□□□ -1.47
SPG11-208ENST00000558155 FOSBP53539 338 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 ARHGAP8P85298 464 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 CDC42EP1Q00587 391 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 UBE2SQ16763 222 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 CLLU1OSQ5K130 101 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 SPECC1Q5M775 1068 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 KIAA0319Q5VV43 1072 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 B4GALNT3Q6L9W6 998 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 PHLDB3Q6NSJ2 640 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 EFCAB12Q6NXP0 572 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 CASC1Q6TDU7 716 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 C15orf39Q6ZRI6 1047 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 C1orf210Q8IVY1 113 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 PLEKHM2Q8IWE5 1019 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 ZNF654Q8IZM8 581 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 SLC44A3Q8N4M1 653 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 DCLK2Q8N568 766 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 SRBD1Q8N5C6 995 aaKnown RBP5.88□□□□□ -1.47
SPG11-208ENST00000558155 HELQQ8TDG4 1101 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 RUFY2Q8WXA3 655 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 AUTS2Q8WXX7 1259 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 IGSF21Q96ID5 467 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 SHDQ96IW2 340 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 KLHL5Q96PQ7 755 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 MTA3Q9BTC8 594 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 ZBP1Q9H171 429 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 RWDD1Q9H446 243 aaPredicted RBP5.88□□□□□ -1.47
SPG11-208ENST00000558155 TBC1D17Q9HA65 648 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 CHST12Q9NRB3 414 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 NRBP2Q9NSY0 501 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 CA14Q9ULX7 337 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 AKT3Q9Y243 479 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 SSX2IPQ9Y2D8 614 aa5.88□□□□□ -1.47
SPG11-208ENST00000558155 GVINP1Q7Z2Y8 2422 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 C5orf42Q9H799 3197 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 CCDC195A0A1B0GUA6 201 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 CCDC69A6NI79 296 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 ZBTB42B2RXF5 422 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 E7EWF7 191 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 DDX39AO00148 427 aaKnown RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 NARSO43776 548 aaKnown RBP5.87□□□□□ -1.47
SPG11-208ENST00000558155 ZC3H11AO75152 810 aaKnown RBP eCLIP5.87□□□□□ -1.47
SPG11-208ENST00000558155 C22orf31O95567 290 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 CCNE2O96020 404 aa5.87□□□□□ -1.47
SPG11-208ENST00000558155 DCNP07585 359 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms