RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 RNF207Q6ZRF8 634 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 CABP7Q86V35 215 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 PROSER1Q86XN7 944 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 TMEFF1Q8IYR6 380 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 GMCL1P1Q8NEA9 526 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 DNERQ8NFT8 737 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 STK32AQ8WU08 396 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 STAG1Q8WVM7 1258 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 FOXJ1Q92949 421 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 NXPE3Q969Y0 559 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 EMID1Q96A84 441 aaPredicted RBP6.75□□□□□ -1.33
TRPM1-204ENST00000557948 KLHL5Q96PQ7 755 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 DBNDD2Q9BQY9 259 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 GZF1Q9H116 711 aaPredicted RBP6.75□□□□□ -1.33
TRPM1-204ENST00000557948 CHMP4BQ9H444 224 aaKnown RBP6.75□□□□□ -1.33
TRPM1-204ENST00000557948 EHMT1Q9H9B1 1298 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 PRMT8Q9NR22 394 aaPredicted RBP6.75□□□□□ -1.33
TRPM1-204ENST00000557948 RAI2Q9Y5P3 530 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 FREM2Q5SZK8 3169 aa6.75□□□□□ -1.33
TRPM1-204ENST00000557948 MYH15Q9Y2K3 1946 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 DOCK8Q8NF50 2099 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 C2orf71A6NGG8 1288 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 TBKBP1A7MCY6 615 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 GIPC1O14908 333 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 PPFIA4O75335 1185 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 CHRNA1P02708 482 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 PRB1P04280 392 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 ICAM1P05362 532 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 SCG2P13521 617 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 LAG3P18627 525 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 SLC1A4P43007 532 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 PLCB3Q01970 1234 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 G3BP1Q13283 466 aaKnown RBP eCLIP6.74□□□□□ -1.33
TRPM1-204ENST00000557948 SNW1Q13573 536 aaKnown RBP6.74□□□□□ -1.33
TRPM1-204ENST00000557948 BMS1Q14692 1282 aaKnown RBP6.74□□□□□ -1.33
TRPM1-204ENST00000557948 SF3A2Q15428 464 aaKnown RBP6.74□□□□□ -1.33
TRPM1-204ENST00000557948 KLHL40Q2TBA0 621 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 CRTC2Q53ET0 693 aaPredicted RBP6.74□□□□□ -1.33
TRPM1-204ENST00000557948 C4orf48Q5BLP8 95 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 GPR149Q86SP6 731 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 PLEKHM2Q8IWE5 1019 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 SMC5Q8IY18 1101 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 LCORLQ8N3X6 602 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 PDCL2Q8N4E4 241 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 MRPL43Q8N983 215 aaKnown RBP6.74□□□□□ -1.33
TRPM1-204ENST00000557948 PLPP7Q8NBV4 271 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 LINC01599Q8WXQ3 324 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 LRIG1Q96JA1 1093 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 FTHL17Q9BXU8 183 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 OSBPL6Q9BZF3 934 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 CCDC8Q9H0W5 538 aaPredicted RBP6.74□□□□□ -1.33
TRPM1-204ENST00000557948 RNPEPQ9H4A4 650 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 SFXN1Q9H9B4 322 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 SLC2A4RGQ9NR83 387 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 ATP8A2Q9NTI2 1148 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 SYNPO2Q9UMS6 1093 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 MTF2Q9Y483 593 aaPredicted RBP6.74□□□□□ -1.33
TRPM1-204ENST00000557948 NEUROG3Q9Y4Z2 214 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 PCDHB7Q9Y5E2 793 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 SDK1Q7Z5N4 2213 aa6.74□□□□□ -1.33
TRPM1-204ENST00000557948 H3BRB1 525 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 NCAM2O15394 837 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 N4BP1O75113 896 aaKnown RBP6.73□□□□□ -1.33
TRPM1-204ENST00000557948 EPCAMP16422 314 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 HOXC8P31273 242 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 RARSP54136 660 aaKnown RBP6.73□□□□□ -1.33
TRPM1-204ENST00000557948 RPS6P62753 249 aaKnown RBP6.73□□□□□ -1.33
TRPM1-204ENST00000557948 PRKCQQ04759 706 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 TROAPQ12815 778 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 TNNI3KQ59H18 835 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 ZBTB41Q5SVQ8 909 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 SLC9C2Q5TAH2 1124 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 TMEM164Q5U3C3 297 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 TSHZ1Q6ZSZ6 1077 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 HSCBQ8IWL3 235 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 STAMQ92783 540 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 GLG1Q92896 1179 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 MKL1Q969V6 931 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 CHMP4CQ96CF2 233 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 MKNK1Q9BUB5 465 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 USP26Q9BXU7 913 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 TUT1Q9H6E5 874 aaKnown RBP6.73□□□□□ -1.33
TRPM1-204ENST00000557948 BCAS3Q9H6U6 928 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 YY1AP1Q9H869 796 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 ARMT1Q9H993 441 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 MKNK2Q9HBH9 465 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 SMC4Q9NTJ3 1288 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 TYW1Q9NV66 732 aaKnown RBP6.73□□□□□ -1.33
TRPM1-204ENST00000557948 BCCIPQ9P287 314 aaKnown RBP eCLIP6.73□□□□□ -1.33
TRPM1-204ENST00000557948 EPS15L1Q9UBC2 864 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 DDX41Q9UJV9 622 aaKnown RBP6.73□□□□□ -1.33
TRPM1-204ENST00000557948 PRR12Q9ULL5 1215 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 NOVA2Q9UNW9 492 aaKnown RBP6.73□□□□□ -1.33
TRPM1-204ENST00000557948 FPGT-TNNI3KV9GXZ4 949 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 SPAG17Q6Q759 2223 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 TEX15Q9BXT5 2789 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 NRCAMQ92823 1304 aa6.73□□□□□ -1.33
TRPM1-204ENST00000557948 LAMA1P25391 3075 aa6.72□□□□□ -1.33
TRPM1-204ENST00000557948 J3QKU1 62 aa6.72□□□□□ -1.33
TRPM1-204ENST00000557948 PRKAB2O43741 272 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms