RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 CRTC2Q53ET0 693 aaPredicted RBP7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 PPM1JQ5JR12 505 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 FBXO47Q5MNV8 452 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 ATAT1Q5SQI0 421 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 KIAA1841Q6NSI8 718 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 TAF2Q6P1X5 1199 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 XRRA1Q6P2D8 792 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 TSHZ1Q6ZSZ6 1077 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 RSPH3Q86UC2 560 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 C1orf210Q8IVY1 113 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 SMC5Q8IY18 1101 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 CRIPAKQ8N1N5 446 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 TMEM57Q8N5G2 664 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 SYTL5Q8TDW5 730 aaPredicted RBP7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 LINC01599Q8WXQ3 324 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 ACSF2Q96CM8 615 aaPredicted RBP7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 TCF25Q9BQ70 676 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 USP26Q9BXU7 913 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 SLKQ9H2G2 1235 aaPredicted RBP7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 MLXIPQ9HAP2 919 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 GRPEL1Q9HAV7 217 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 IL17RBQ9NRM6 502 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 PUF60Q9UHX1 559 aaKnown RBP7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 ANGPTL2Q9UKU9 493 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 LRFN2Q9ULH4 789 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 ZMIZ1Q9ULJ6 1067 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 USP18Q9UMW8 372 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 TNNQ9UQP3 1299 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 LZTS1Q9Y250 596 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 CNOT1A5YKK6 2376 aaKnown RBP7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 FRMPD2Q68DX3 1309 aaPredicted RBP7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 MIA3Q5JRA6 1907 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 NOP56O00567 594 aaKnown RBP7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 NMT2O60551 498 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 EIF2AK2P19525 551 aaKnown RBP7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 GATMP50440 423 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 MGAT3Q09327 533 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 APOBRQ0VD83 1088 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 HS1BP3Q53T59 392 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 OXLD1Q5BKU9 147 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 SPECC1Q5M775 1068 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 C6orf118Q5T5N4 469 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 OTOP3Q7RTS5 596 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 MCF2L2Q86YR7 1114 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 HSCBQ8IWL3 235 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 KCTD17Q8N5Z5 321 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 LMBR1Q8WVP7 490 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 MRPS27Q92552 414 aaKnown RBP7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 KIF1BPQ96EK5 621 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 PKNOX2Q96KN3 472 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 GBP4Q96PP9 640 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 GPR20Q99678 358 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 C22orf23Q9BZE7 217 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 NACAP1Q9BZK3 213 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 COL20A1Q9P218 1284 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 WNT16Q9UBV4 365 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 ZNF215Q9UL58 517 aaPredicted RBP7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 NOVA2Q9UNW9 492 aaKnown RBP7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 PCDHGA11Q9Y5H2 935 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 HCFC2Q9Y5Z7 792 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 NBEAQ8NFP9 2946 aa7.84□□□□□ -1.15
SPTLC2-206ENST00000557566 DOCK5Q9H7D0 1870 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 ABCB11O95342 1321 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 NRCAMQ92823 1304 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 SOBPA7XYQ1 873 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 HIDE1A8MVS5 230 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 PATL2C9JE40 543 aaKnown RBP7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 GPAA1O43292 621 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 DKK1O94907 266 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 WEE2P0C1S8 567 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 TGFB3P10600 412 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 UBA1P22314 1058 aaKnown RBP7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 CD52P31358 61 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 ADAM17P78536 824 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 PPARAQ07869 468 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 CBLBQ13191 982 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 ZNF528Q3MIS6 628 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 RARS2Q5T160 578 aaKnown RBP7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 CEP85Q6P2H3 762 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 TMC7Q7Z402 723 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 ANKMY2Q8IV38 441 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 IFNL3Q8IZI9 196 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 COLGALT1Q8NBJ5 622 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 PANK1Q8TE04 598 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 TBC1D5Q92609 795 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 APPBP2Q92624 585 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 OSBP2Q969R2 916 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 NAP1L5Q96NT1 182 aaPredicted RBP7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 PPP1R9BQ96SB3 815 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 MAP7D2Q96T17 732 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 TBC1D17Q9HA65 648 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 KCNK12Q9HB15 430 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 PXMP2Q9NR77 195 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 DZANK1Q9NVP4 752 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 DNAAF2Q9NVR5 837 aaKnown RBP7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 IGSF9Q9P2J2 1179 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 PCDHB7Q9Y5E2 793 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 SQORQ9Y6N5 450 aa7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 ASH1LQ9NR48 2969 aaKnown RBP7.83□□□□□ -1.16
SPTLC2-206ENST00000557566 KRBA1A5PL33 1030 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms