RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 METTL16Q86W50 562 aaKnown RBP5.45□□□□□ -1.54
ATXN3-231ENST00000554994 TMEM199Q8N511 208 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 BCL7CQ8WUZ0 217 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-231ENST00000554994 CCDC97Q96F63 343 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-231ENST00000554994 NUP88Q99567 741 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-231ENST00000554994 PRRX2Q99811 253 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 MTIF3Q9H2K0 278 aaKnown RBP5.45□□□□□ -1.54
ATXN3-231ENST00000554994 SUGCTQ9HAC7 445 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 IL23AQ9NPF7 189 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 DZANK1Q9NVP4 752 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 HOXC10Q9NYD6 342 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 SLC4A7Q9Y6M7 1214 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 UMODL1Q5DID0 1318 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 KIAA1217Q5T5P2 1943 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 GREB1LQ9C091 1923 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-231ENST00000554994 FAM208BQ5VWN6 2430 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 B4E1Z4 1266 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 F5H6K3 240 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 ZBTB39O15060 712 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 SEPT4O43236 478 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 TTLL1O95922 423 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 CES1P23141 567 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 MCCP23508 829 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 TAP1Q03518 808 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 SOX4Q06945 474 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-231ENST00000554994 KLRC3Q07444 240 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 BNIP3Q12983 259 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 COG2Q14746 738 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 CCDC96Q2M329 555 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 TMEM67Q5HYA8 995 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 EXOSC6Q5RKV6 272 aaKnown RBP5.44□□□□□ -1.54
ATXN3-231ENST00000554994 FAM83BQ5T0W9 1011 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 SLFN13Q68D06 897 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 CATSPERGQ6ZRH7 1159 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 EP400NLQ6ZTU2 488 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 CHST3Q7LGC8 479 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 ANKRD33Q7Z3H0 272 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 FRMD5Q7Z6J6 570 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 CPXCR1Q8N123 301 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 LRRC47Q8N1G4 583 aaKnown RBP5.44□□□□□ -1.54
ATXN3-231ENST00000554994 C1orf127Q8N9H9 656 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 GATA6Q92908 595 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 CEP95Q96GE4 821 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 KIAA1683Q9H0B3 1180 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 RNF41Q9H4P4 317 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-231ENST00000554994 RC3H2Q9HBD1 1191 aaKnown RBP5.44□□□□□ -1.54
ATXN3-231ENST00000554994 VAT1LQ9HCJ6 419 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 ANO2Q9NQ90 1003 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 XPNPEP3Q9NQH7 507 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 STARD7Q9NQZ5 370 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 SALL4Q9UJQ4 1053 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 MYO15AQ9UKN7 3530 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 MTUS1Q9ULD2 1270 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 NAP1L2Q9ULW6 460 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-231ENST00000554994 TMX2Q9Y320 296 aa5.44□□□□□ -1.54
ATXN3-231ENST00000554994 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-231ENST00000554994 ERICH2A1L162 156 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 SLC15A5A6NIM6 579 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 TMEM232C9JQI7 657 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 PROB1E7EW31 1015 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 DHX16O60231 1041 aaKnown RBP5.43□□□□□ -1.54
ATXN3-231ENST00000554994 ZBED4O75132 1171 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 CDC45O75419 566 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 VCAM1P19320 739 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 HOXA7P31268 230 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-231ENST00000554994 CCL23P55773 120 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 SNAP25P60880 206 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 CCNA1P78396 465 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 CYP27A1Q02318 531 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 GSTM4Q03013 218 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 HERC4Q5GLZ8 1057 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-231ENST00000554994 KIAA1755Q5JYT7 1200 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 ERICH6BQ5W0A0 696 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 KCTD1Q719H9 257 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 RALYLQ86SE5 291 aaKnown RBP5.43□□□□□ -1.54
ATXN3-231ENST00000554994 IQCA1Q86XH1 822 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 TICAM2Q86XR7 235 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 SIAH1Q8IUQ4 282 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 CCDC82Q8N4S0 544 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 ASAP3Q8TDY4 903 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 ESR2Q92731 530 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 EDAQ92838 391 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 TOX2Q96NM4 488 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 UBAC1Q9BSL1 405 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 DSCC1Q9BVC3 393 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 KRT23Q9C075 422 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 VCPKMTQ9H867 229 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 KAT14Q9H8E8 782 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 FBXO28Q9NVF7 368 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 MTMR4Q9NYA4 1195 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 ZSWIM5Q9P217 1185 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 NYAP2Q9P242 653 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 NOVA2Q9UNW9 492 aaKnown RBP5.43□□□□□ -1.54
ATXN3-231ENST00000554994 RBM8AQ9Y5S9 174 aaKnown RBP5.43□□□□□ -1.54
ATXN3-231ENST00000554994 IVNS1ABPQ9Y6Y0 642 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 TRIOO75962 3097 aa5.43□□□□□ -1.54
ATXN3-231ENST00000554994 FRMPD2Q68DX3 1309 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-231ENST00000554994 EP300Q09472 2414 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-231ENST00000554994 IFIT3O14879 490 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms