RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ADAM2Q99965 735 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 EIF2AK1Q9BQI3 630 aaKnown RBP8.42□□□□□ -1.06
LINC00640-201ENST00000554409 C17orf80Q9BSJ5 609 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 TMEM60Q9H2L4 133 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 ELAC1Q9H777 363 aaKnown RBP8.42□□□□□ -1.06
LINC00640-201ENST00000554409 RGL1Q9NZL6 768 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 RWDD3Q9Y3V2 267 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 MYO9BQ13459 2157 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 DENND3A2RUS2 1198 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 H3BNC9 293 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 RB1P06400 928 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 OR52Z1P0C646 297 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 XRCC6P12956 609 aaKnown RBP eCLIP8.41□□□□□ -1.06
LINC00640-201ENST00000554409 POLGP54098 1239 aaPredicted RBP8.41□□□□□ -1.06
LINC00640-201ENST00000554409 NPEPPSP55786 919 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 CYP4A11Q02928 519 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 GNL2Q13823 731 aaKnown RBP8.41□□□□□ -1.06
LINC00640-201ENST00000554409 EPC2Q52LR7 807 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 PLA2G4FQ68DD2 849 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 TPH2Q8IWU9 490 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 TMEM192Q8IY95 271 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 GDPD5Q8WTR4 605 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 NLRP7Q8WX94 980 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 CEP170P1Q96L14 293 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 SH2D3AQ9BRG2 576 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 BACH2Q9BYV9 841 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 GCOM2Q9BZD3 368 aaPredicted RBP8.41□□□□□ -1.06
LINC00640-201ENST00000554409 INO80BQ9C086 356 aaPredicted RBP8.41□□□□□ -1.06
LINC00640-201ENST00000554409 ANKEF1Q9NU02 776 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 SUCLA2Q9P2R7 463 aaPredicted RBP8.41□□□□□ -1.06
LINC00640-201ENST00000554409 NOL7Q9UMY1 257 aaKnown RBP8.41□□□□□ -1.06
LINC00640-201ENST00000554409 COL6A3P12111 3177 aa8.41□□□□□ -1.06
LINC00640-201ENST00000554409 LAD1O00515 517 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 ASAP2O43150 1006 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 SPATA31C1P0DKV0 1188 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 ATP2B1P20020 1258 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 MUTP22033 750 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 SFPQP23246 707 aaKnown RBP eCLIP8.4□□□□□ -1.06
LINC00640-201ENST00000554409 GJB2P29033 226 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 BMPR1AP36894 532 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 FAM189BP81408 668 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 BTG3Q14201 252 aaPredicted RBP8.4□□□□□ -1.06
LINC00640-201ENST00000554409 EMC2Q15006 297 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 ZNF174Q15697 407 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 CCDC85BQ15834 202 aaPredicted RBP8.4□□□□□ -1.06
LINC00640-201ENST00000554409 RHPN2Q8IUC4 686 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 ZNF687Q8N1G0 1237 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 C4orf32Q8N8J7 132 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 ERMNQ8TAM6 284 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 TCP11Q8WWU5 503 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 PSPC1Q8WXF1 523 aaKnown RBP8.4□□□□□ -1.06
LINC00640-201ENST00000554409 P2RX5Q93086 422 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 MRPL38Q96DV4 380 aaKnown RBP8.4□□□□□ -1.06
LINC00640-201ENST00000554409 SCLT1Q96NL6 688 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 MTRQ99707 1265 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 C11orf84Q9BUA3 381 aaPredicted RBP8.4□□□□□ -1.06
LINC00640-201ENST00000554409 POLR3CQ9BUI4 534 aaPredicted RBP8.4□□□□□ -1.06
LINC00640-201ENST00000554409 TRAIPQ9BWF2 469 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 PLVAPQ9BX97 442 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 IFT122Q9HBG6 1241 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 TUFT1Q9NNX1 390 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 CHST12Q9NRB3 414 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 TMEM161AQ9NX61 479 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 THEGQ9P2T0 379 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 MTUS1Q9ULD2 1270 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 LRFN2Q9ULH4 789 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.4□□□□□ -1.06
LINC00640-201ENST00000554409 PCDHB7Q9Y5E2 793 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 COL4A3BPQ9Y5P4 624 aa8.4□□□□□ -1.06
LINC00640-201ENST00000554409 PLXNA4Q9HCM2 1894 aa8.4□□□□□ -1.07
LINC00640-201ENST00000554409 CHD7Q9P2D1 2997 aa8.4□□□□□ -1.07
LINC00640-201ENST00000554409 PRRC2BQ5JSZ5 2229 aaKnown RBP8.39□□□□□ -1.07
LINC00640-201ENST00000554409 TRANK1O15050 2925 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 A0A087WZ62 844 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 A0A0U1RQF3 1178 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 ZBTB39O15060 712 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 HOXA2O43364 376 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 DGAT1O75907 488 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 ZSCAN20P17040 1043 aaPredicted RBP8.39□□□□□ -1.07
LINC00640-201ENST00000554409 RPA1P27694 616 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 CTNNB1P35222 781 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 TECP42680 631 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 RARRES1P49788 294 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 TOB1P50616 345 aaPredicted RBP8.39□□□□□ -1.07
LINC00640-201ENST00000554409 POU5F1BQ06416 359 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 GPM6BQ13491 265 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 CUL4AQ13619 759 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 PDIA5Q14554 519 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 MXD4Q14582 209 aaPredicted RBP8.39□□□□□ -1.07
LINC00640-201ENST00000554409 PTPROQ16827 1216 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 NAALADL2Q58DX5 795 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 RILPL1Q5EBL4 403 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 XKR9Q5GH70 373 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 SRGAP1Q7Z6B7 1085 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 FERMT3Q86UX7 667 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 CATSPER3Q86XQ3 398 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 MICALL1Q8N3F8 863 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 ATXN2LQ8WWM7 1075 aaKnown RBP8.39□□□□□ -1.07
LINC00640-201ENST00000554409 PPM1EQ8WY54 764 aa8.39□□□□□ -1.07
LINC00640-201ENST00000554409 RSPH1Q8WYR4 309 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms