RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 OTUD6AQ7L8S5 288 aa25.82■■□□□ 1.72
CACNB3-208ENST00000548279 NOSTRINQ8IVI9 506 aa25.82■■□□□ 1.72
CACNB3-208ENST00000548279 KLHL23Q8NBE8 558 aa25.82■■□□□ 1.72
CACNB3-208ENST00000548279 PRPF31Q8WWY3 499 aaKnown RBP25.82■■□□□ 1.72
CACNB3-208ENST00000548279 P2RX5Q93086 422 aa25.82■■□□□ 1.72
CACNB3-208ENST00000548279 UBE2ZQ9H832 354 aaPredicted RBP25.82■■□□□ 1.72
CACNB3-208ENST00000548279 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.81■■□□□ 1.72
CACNB3-208ENST00000548279 CDC42EP1Q00587 391 aa25.81■■□□□ 1.72
CACNB3-208ENST00000548279 TTC38Q5R3I4 469 aa25.81■■□□□ 1.72
CACNB3-208ENST00000548279 NEK9Q8TD19 979 aa25.81■■□□□ 1.72
CACNB3-208ENST00000548279 CASD1Q96PB1 797 aa25.81■■□□□ 1.72
CACNB3-208ENST00000548279 LMAN2LQ9H0V9 348 aa25.81■■□□□ 1.72
CACNB3-208ENST00000548279 NSUN3Q9H649 340 aaKnown RBP25.81■■□□□ 1.72
CACNB3-208ENST00000548279 CWH43Q9H720 699 aa25.81■■□□□ 1.72
CACNB3-208ENST00000548279 MINDY3Q9H8M7 445 aa25.81■■□□□ 1.72
CACNB3-208ENST00000548279 UPF2Q9HAU5 1272 aaKnown RBP25.81■■□□□ 1.72
CACNB3-208ENST00000548279 SPATA31C1P0DKV0 1188 aa25.8■■□□□ 1.72
CACNB3-208ENST00000548279 LAMTOR4Q0VGL1 99 aa25.8■■□□□ 1.72
CACNB3-208ENST00000548279 CLLU1OSQ5K130 101 aa25.8■■□□□ 1.72
CACNB3-208ENST00000548279 ZNF598Q86UK7 904 aaKnown RBP25.8■■□□□ 1.72
CACNB3-208ENST00000548279 SPPL3Q8TCT6 385 aa25.8■■□□□ 1.72
CACNB3-208ENST00000548279 PIGOQ8TEQ8 1089 aa25.8■■□□□ 1.72
CACNB3-208ENST00000548279 PSPC1Q8WXF1 523 aaKnown RBP25.8■■□□□ 1.72
CACNB3-208ENST00000548279 NECAB3Q96P71 396 aaPredicted RBP25.8■■□□□ 1.72
CACNB3-208ENST00000548279 TYW1Q9NV66 732 aaKnown RBP25.8■■□□□ 1.72
CACNB3-208ENST00000548279 RNF216Q9NWF9 866 aaPredicted RBP25.8■■□□□ 1.72
CACNB3-208ENST00000548279 TTC28Q96AY4 2481 aa25.8■■□□□ 1.72
CACNB3-208ENST00000548279 A0A0U1RQF3 1178 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 MED24O75448 989 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 OR52Z1P0C646 297 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 SFPQP23246 707 aaKnown RBP eCLIP25.79■■□□□ 1.72
CACNB3-208ENST00000548279 U2AF2P26368 475 aaKnown RBP eCLIP25.79■■□□□ 1.72
CACNB3-208ENST00000548279 TECP42680 631 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 AAK1Q2M2I8 961 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 LRRC55Q6ZSA7 311 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 C4orf32Q8N8J7 132 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 RNF169Q8NCN4 708 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 MTRQ99707 1265 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 TMEM117Q9H0C3 514 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 ANKEF1Q9NU02 776 aa25.79■■□□□ 1.72
CACNB3-208ENST00000548279 SRGAP2CP0DJJ0 459 aa25.78■■□□□ 1.72
CACNB3-208ENST00000548279 RARRES1P49788 294 aa25.78■■□□□ 1.72
CACNB3-208ENST00000548279 TOB1P50616 345 aaPredicted RBP25.78■■□□□ 1.72
CACNB3-208ENST00000548279 GNL2Q13823 731 aaKnown RBP25.78■■□□□ 1.72
CACNB3-208ENST00000548279 FERMT3Q86UX7 667 aa25.78■■□□□ 1.72
CACNB3-208ENST00000548279 EXOC8Q8IYI6 725 aa25.78■■□□□ 1.72
CACNB3-208ENST00000548279 PIN4Q9Y237 131 aaKnown RBP25.78■■□□□ 1.72
CACNB3-208ENST00000548279 IRS1P35568 1242 aa25.77■■□□□ 1.72
CACNB3-208ENST00000548279 ORC2Q13416 577 aaPredicted RBP25.77■■□□□ 1.72
CACNB3-208ENST00000548279 COL19A1Q14993 1142 aa25.77■■□□□ 1.72
CACNB3-208ENST00000548279 NAALADL2Q58DX5 795 aa25.77■■□□□ 1.72
CACNB3-208ENST00000548279 SPOUT1Q5T280 376 aaKnown RBP25.77■■□□□ 1.72
CACNB3-208ENST00000548279 CATSPER4Q7RTX7 472 aa25.77■■□□□ 1.72
CACNB3-208ENST00000548279 CATSPER3Q86XQ3 398 aa25.77■■□□□ 1.72
CACNB3-208ENST00000548279 COLGALT1Q8NBJ5 622 aa25.77■■□□□ 1.72
CACNB3-208ENST00000548279 UHRF1Q96T88 793 aaPredicted RBP25.77■■□□□ 1.72
CACNB3-208ENST00000548279 INO80BQ9C086 356 aaPredicted RBP25.77■■□□□ 1.72
CACNB3-208ENST00000548279 CHST12Q9NRB3 414 aa25.77■■□□□ 1.72
CACNB3-208ENST00000548279 GAS2O43903 313 aaKnown RBP25.76■■□□□ 1.71
CACNB3-208ENST00000548279 KCNA5P22460 613 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 GTF2F1P35269 517 aaKnown RBP eCLIP25.76■■□□□ 1.71
CACNB3-208ENST00000548279 PHKA2P46019 1235 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 TRAPPC10P48553 1259 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 HYAL1Q12794 435 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 RNF149Q8NC42 400 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 IL27Q8NEV9 243 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 HELQQ8TDG4 1101 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 ASAP3Q8TDY4 903 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 POF1BQ8WVV4 589 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 TCP11Q8WWU5 503 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 AGPAT5Q9NUQ2 364 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 DACT1Q9NYF0 836 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 PCDHB6Q9Y5E3 794 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 PCDHGC5Q9Y5F6 944 aa25.76■■□□□ 1.71
CACNB3-208ENST00000548279 MEIS3P2A8K0S8 358 aa25.75■■□□□ 1.71
CACNB3-208ENST00000548279 GJB2P29033 226 aa25.75■■□□□ 1.71
CACNB3-208ENST00000548279 LONRF3Q496Y0 759 aa25.75■■□□□ 1.71
CACNB3-208ENST00000548279 TWF2Q6IBS0 349 aaKnown RBP25.75■■□□□ 1.71
CACNB3-208ENST00000548279 LPPQ93052 612 aa25.75■■□□□ 1.71
CACNB3-208ENST00000548279 TRAIPQ9BWF2 469 aa25.75■■□□□ 1.71
CACNB3-208ENST00000548279 TUFT1Q9NNX1 390 aa25.75■■□□□ 1.71
CACNB3-208ENST00000548279 NOL7Q9UMY1 257 aaKnown RBP25.75■■□□□ 1.71
CACNB3-208ENST00000548279 HOXA2O43364 376 aa25.74■■□□□ 1.71
CACNB3-208ENST00000548279 EOMESO95936 686 aa25.74■■□□□ 1.71
CACNB3-208ENST00000548279 PBX3P40426 434 aa25.74■■□□□ 1.71
CACNB3-208ENST00000548279 POTEGQ6S5H5 508 aa25.74■■□□□ 1.71
CACNB3-208ENST00000548279 SRGAP1Q7Z6B7 1085 aa25.74■■□□□ 1.71
CACNB3-208ENST00000548279 ADGRD2Q7Z7M1 963 aa25.74■■□□□ 1.71
CACNB3-208ENST00000548279 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.74■■□□□ 1.71
CACNB3-208ENST00000548279 PABPC5Q96DU9 382 aaKnown RBP25.74■■□□□ 1.71
CACNB3-208ENST00000548279 POLR3CQ9BUI4 534 aaPredicted RBP25.74■■□□□ 1.71
CACNB3-208ENST00000548279 FAM105AQ9NUU6 356 aa25.74■■□□□ 1.71
CACNB3-208ENST00000548279 PCDHB12Q9Y5F1 795 aa25.74■■□□□ 1.71
CACNB3-208ENST00000548279 H3BQ06 376 aaPredicted RBP25.73■■□□□ 1.71
CACNB3-208ENST00000548279 ASAP2O43150 1006 aa25.73■■□□□ 1.71
CACNB3-208ENST00000548279 USO1O60763 962 aaKnown RBP25.73■■□□□ 1.71
CACNB3-208ENST00000548279 DGAT1O75907 488 aa25.73■■□□□ 1.71
CACNB3-208ENST00000548279 HOXA11P31270 313 aaPredicted RBP25.73■■□□□ 1.71
CACNB3-208ENST00000548279 ARL2P36404 184 aa25.73■■□□□ 1.71
CACNB3-208ENST00000548279 CAPSQ13938 189 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms