RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 RNF19AQ9NV58 838 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 DACT1Q9NYF0 836 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 PCDHB6Q9Y5E3 794 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 TTC28Q96AY4 2481 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 DLL1O00548 723 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 HOXA2O43364 376 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 MED24O75448 989 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 ATF7P17544 494 aaPredicted RBP17.09■□□□□ 0.33
SSH1-204ENST00000546697 SFPQP23246 707 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSH1-204ENST00000546697 LAMTOR4Q0VGL1 99 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 XKR9Q5GH70 373 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 ECHDC2Q86YB7 292 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 RHPN2Q8IUC4 686 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 KCTD17Q8N5Z5 321 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 INTS4Q96HW7 963 aaKnown RBP17.09■□□□□ 0.33
SSH1-204ENST00000546697 C11orf84Q9BUA3 381 aaPredicted RBP17.09■□□□□ 0.33
SSH1-204ENST00000546697 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
SSH1-204ENST00000546697 COG5Q9UP83 839 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 PCDHB7Q9Y5E2 793 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 MRPL42Q9Y6G3 142 aaKnown RBP17.09■□□□□ 0.33
SSH1-204ENST00000546697 KIAA1671Q9BY89 1806 aa17.09■□□□□ 0.33
SSH1-204ENST00000546697 ZSCAN20P17040 1043 aaPredicted RBP17.08■□□□□ 0.32
SSH1-204ENST00000546697 TECP42680 631 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 PTENP60484 403 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 ATP2C1P98194 919 aaPredicted RBP17.08■□□□□ 0.32
SSH1-204ENST00000546697 PTGDRQ13258 359 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 GNL2Q13823 731 aaKnown RBP17.08■□□□□ 0.32
SSH1-204ENST00000546697 HAUS3Q68CZ6 603 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 ERMNQ8TAM6 284 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 NACC1Q96RE7 527 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 PPP1R16BQ96T49 567 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 MTRQ99707 1265 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 TMEM117Q9H0C3 514 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 AGPAT5Q9NUQ2 364 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 THEGQ9P2T0 379 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 SMC3Q9UQE7 1217 aa17.08■□□□□ 0.32
SSH1-204ENST00000546697 SKIP12755 728 aa17.07■□□□□ 0.32
SSH1-204ENST00000546697 ATP2B1P20020 1258 aa17.07■□□□□ 0.32
SSH1-204ENST00000546697 HOXA11P31270 313 aaPredicted RBP17.07■□□□□ 0.32
SSH1-204ENST00000546697 GPM6BQ13491 265 aa17.07■□□□□ 0.32
SSH1-204ENST00000546697 PTPROQ16827 1216 aa17.07■□□□□ 0.32
SSH1-204ENST00000546697 ARL6IP4Q66PJ3 421 aaKnown RBP17.07■□□□□ 0.32
SSH1-204ENST00000546697 KSR1Q8IVT5 923 aa17.07■□□□□ 0.32
SSH1-204ENST00000546697 TMEM143Q96AN5 459 aa17.07■□□□□ 0.32
SSH1-204ENST00000546697 ATP6V0A4Q9HBG4 840 aa17.07■□□□□ 0.32
SSH1-204ENST00000546697 MTUS1Q9ULD2 1270 aa17.07■□□□□ 0.32
SSH1-204ENST00000546697 LRFN2Q9ULH4 789 aa17.07■□□□□ 0.32
SSH1-204ENST00000546697 ATG2AQ2TAZ0 1938 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.06■□□□□ 0.32
SSH1-204ENST00000546697 PHKA2P46019 1235 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 RAB27AP51159 221 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 CAMK1Q14012 370 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 NBR1Q14596 966 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 IL17AQ16552 155 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 CSPP1Q1MSJ5 1256 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 TIGD5Q53EQ6 642 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 HYIQ5T013 277 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 FAM102BQ5T8I3 360 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 MRPL10Q7Z7H8 261 aaKnown RBP17.06■□□□□ 0.32
SSH1-204ENST00000546697 MCPH1Q8NEM0 835 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 CASD1Q96PB1 797 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 RAB34Q9BZG1 259 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 CWH43Q9H720 699 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 MINDY3Q9H8M7 445 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 PLAGL2Q9UPG8 496 aa17.06■□□□□ 0.32
SSH1-204ENST00000546697 BRWD1Q9NSI6 2320 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 AXLP30530 894 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 CTNNB1P35222 781 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 UBE3AQ05086 875 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 AMHR2Q16671 573 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 TJAP1Q5JTD0 557 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 LARP1BQ659C4 914 aaKnown RBP17.05■□□□□ 0.32
SSH1-204ENST00000546697 CDCA2Q69YH5 1023 aaPredicted RBP17.05■□□□□ 0.32
SSH1-204ENST00000546697 BRAPQ7Z569 592 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 PIGOQ8TEQ8 1089 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 SNX21Q969T3 373 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 CCDC51Q96ER9 411 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 ZNF668Q96K58 619 aaPredicted RBP17.05■□□□□ 0.32
SSH1-204ENST00000546697 NLRP4Q96MN2 994 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 ASB2Q96Q27 587 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 PRDM6Q9NQX0 595 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 LRWD1Q9UFC0 647 aa17.05■□□□□ 0.32
SSH1-204ENST00000546697 MORC2Q9Y6X9 1032 aaPredicted RBP17.05■□□□□ 0.32
SSH1-204ENST00000546697 CARNS1A5YM72 827 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 INPPL1O15357 1258 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 SLC26A4O43511 780 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 CSDE1O75534 798 aaKnown RBP17.04■□□□□ 0.32
SSH1-204ENST00000546697 CYP11B2P19099 503 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 PDCP20941 246 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 FGFR4P22455 802 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 GLRA2P23416 452 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 GATMP50440 423 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 MRPS5P82675 430 aaKnown RBP17.04■□□□□ 0.32
SSH1-204ENST00000546697 CAPSQ13938 189 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 ECM1Q16610 540 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 POTEGQ6S5H5 508 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 RNF149Q8NC42 400 aa17.04■□□□□ 0.32
SSH1-204ENST00000546697 SPPL3Q8TCT6 385 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms