RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 TIGD5Q53EQ6 642 aa20.79■□□□□ 0.92
TMED3-204ENST00000543455 XKR9Q5GH70 373 aa20.79■□□□□ 0.92
TMED3-204ENST00000543455 NOSTRINQ8IVI9 506 aa20.79■□□□□ 0.92
TMED3-204ENST00000543455 KLHL23Q8NBE8 558 aa20.79■□□□□ 0.92
TMED3-204ENST00000543455 SPPL3Q8TCT6 385 aa20.79■□□□□ 0.92
TMED3-204ENST00000543455 PRPF31Q8WWY3 499 aaKnown RBP20.79■□□□□ 0.92
TMED3-204ENST00000543455 NLRP4Q96MN2 994 aa20.79■□□□□ 0.92
TMED3-204ENST00000543455 NECAB3Q96P71 396 aaPredicted RBP20.79■□□□□ 0.92
TMED3-204ENST00000543455 CASD1Q96PB1 797 aa20.79■□□□□ 0.92
TMED3-204ENST00000543455 JPH2Q9BR39 696 aaPredicted RBP20.79■□□□□ 0.92
TMED3-204ENST00000543455 MINDY3Q9H8M7 445 aa20.79■□□□□ 0.92
TMED3-204ENST00000543455 ATP6V0A4Q9HBG4 840 aa20.79■□□□□ 0.92
TMED3-204ENST00000543455 COL4A3BPQ9Y5P4 624 aa20.79■□□□□ 0.92
TMED3-204ENST00000543455 POLGP54098 1239 aaPredicted RBP20.78■□□□□ 0.92
TMED3-204ENST00000543455 CDC42EP1Q00587 391 aa20.78■□□□□ 0.92
TMED3-204ENST00000543455 NBR1Q14596 966 aa20.78■□□□□ 0.92
TMED3-204ENST00000543455 CLLU1OSQ5K130 101 aa20.78■□□□□ 0.92
TMED3-204ENST00000543455 LRRC55Q6ZSA7 311 aa20.78■□□□□ 0.92
TMED3-204ENST00000543455 C4orf32Q8N8J7 132 aa20.78■□□□□ 0.92
TMED3-204ENST00000543455 FAM184AQ8NB25 1140 aa20.78■□□□□ 0.92
TMED3-204ENST00000543455 SLC7A3Q8WY07 619 aa20.78■□□□□ 0.92
TMED3-204ENST00000543455 TMX3Q96JJ7 454 aa20.78■□□□□ 0.92
TMED3-204ENST00000543455 LMAN2LQ9H0V9 348 aa20.78■□□□□ 0.92
TMED3-204ENST00000543455 NSUN3Q9H649 340 aaKnown RBP20.78■□□□□ 0.92
TMED3-204ENST00000543455 TYW1Q9NV66 732 aaKnown RBP20.78■□□□□ 0.92
TMED3-204ENST00000543455 A0A0U1RQF3 1178 aa20.77■□□□□ 0.92
TMED3-204ENST00000543455 ZSCAN20P17040 1043 aaPredicted RBP20.77■□□□□ 0.92
TMED3-204ENST00000543455 U2AF2P26368 475 aaKnown RBP eCLIP20.77■□□□□ 0.92
TMED3-204ENST00000543455 TOB1P50616 345 aaPredicted RBP20.77■□□□□ 0.92
TMED3-204ENST00000543455 OTUD6AQ7L8S5 288 aa20.77■□□□□ 0.92
TMED3-204ENST00000543455 NEK9Q8TD19 979 aa20.77■□□□□ 0.92
TMED3-204ENST00000543455 BDP1A6H8Y1 2624 aa20.77■□□□□ 0.91
TMED3-204ENST00000543455 CSPG5O95196 566 aa20.76■□□□□ 0.91
TMED3-204ENST00000543455 LAMTOR4Q0VGL1 99 aa20.76■□□□□ 0.91
TMED3-204ENST00000543455 AAK1Q2M2I8 961 aa20.76■□□□□ 0.91
TMED3-204ENST00000543455 NAALADL2Q58DX5 795 aa20.76■□□□□ 0.91
TMED3-204ENST00000543455 TTC38Q5R3I4 469 aa20.76■□□□□ 0.91
TMED3-204ENST00000543455 FERMT3Q86UX7 667 aa20.76■□□□□ 0.91
TMED3-204ENST00000543455 PSPC1Q8WXF1 523 aaKnown RBP20.76■□□□□ 0.91
TMED3-204ENST00000543455 TMEM117Q9H0C3 514 aa20.76■□□□□ 0.91
TMED3-204ENST00000543455 ANKEF1Q9NU02 776 aa20.76■□□□□ 0.91
TMED3-204ENST00000543455 RBM19Q9Y4C8 960 aaKnown RBP20.76■□□□□ 0.91
TMED3-204ENST00000543455 ST18O60284 1047 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 MED24O75448 989 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 SFPQP23246 707 aaKnown RBP eCLIP20.75■□□□□ 0.91
TMED3-204ENST00000543455 IRS1P35568 1242 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 RARRES1P49788 294 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 HYAL1Q12794 435 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 ORC2Q13416 577 aaPredicted RBP20.75■□□□□ 0.91
TMED3-204ENST00000543455 COLGALT1Q8NBJ5 622 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 PIGOQ8TEQ8 1089 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 UHRF1Q96T88 793 aaPredicted RBP20.75■□□□□ 0.91
TMED3-204ENST00000543455 TRAIPQ9BWF2 469 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 CHST12Q9NRB3 414 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 RNF216Q9NWF9 866 aaPredicted RBP20.75■□□□□ 0.91
TMED3-204ENST00000543455 GAS2O43903 313 aaKnown RBP20.75■□□□□ 0.91
TMED3-204ENST00000543455 OR52Z1P0C646 297 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 SRGAP2CP0DJJ0 459 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 GTF2F1P35269 517 aaKnown RBP eCLIP20.75■□□□□ 0.91
TMED3-204ENST00000543455 CATSPER3Q86XQ3 398 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 EXOC8Q8IYI6 725 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.75■□□□□ 0.91
TMED3-204ENST00000543455 ASAP3Q8TDY4 903 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 POF1BQ8WVV4 589 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 MTRQ99707 1265 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 PIN4Q9Y237 131 aaKnown RBP20.75■□□□□ 0.91
TMED3-204ENST00000543455 PCDHGC5Q9Y5F6 944 aa20.75■□□□□ 0.91
TMED3-204ENST00000543455 MEIS3P2A8K0S8 358 aa20.74■□□□□ 0.91
TMED3-204ENST00000543455 KCNA5P22460 613 aa20.74■□□□□ 0.91
TMED3-204ENST00000543455 LTBRP36941 435 aa20.74■□□□□ 0.91
TMED3-204ENST00000543455 TECP42680 631 aa20.74■□□□□ 0.91
TMED3-204ENST00000543455 PHKA2P46019 1235 aa20.74■□□□□ 0.91
TMED3-204ENST00000543455 TRAPPC10P48553 1259 aa20.74■□□□□ 0.91
TMED3-204ENST00000543455 CATSPER4Q7RTX7 472 aa20.74■□□□□ 0.91
TMED3-204ENST00000543455 RNF169Q8NCN4 708 aa20.74■□□□□ 0.91
TMED3-204ENST00000543455 PABPC5Q96DU9 382 aaKnown RBP20.74■□□□□ 0.91
TMED3-204ENST00000543455 INO80BQ9C086 356 aaPredicted RBP20.74■□□□□ 0.91
TMED3-204ENST00000543455 AGPAT5Q9NUQ2 364 aa20.74■□□□□ 0.91
TMED3-204ENST00000543455 DACT1Q9NYF0 836 aa20.74■□□□□ 0.91
TMED3-204ENST00000543455 EOMESO95936 686 aa20.73■□□□□ 0.91
TMED3-204ENST00000543455 HOXA11P31270 313 aaPredicted RBP20.73■□□□□ 0.91
TMED3-204ENST00000543455 CTC1Q2NKJ3 1217 aa20.73■□□□□ 0.91
TMED3-204ENST00000543455 LEXMQ3ZCV2 418 aa20.73■□□□□ 0.91
TMED3-204ENST00000543455 SRGAP1Q7Z6B7 1085 aa20.73■□□□□ 0.91
TMED3-204ENST00000543455 ADGRD2Q7Z7M1 963 aa20.73■□□□□ 0.91
TMED3-204ENST00000543455 RNF149Q8NC42 400 aa20.73■□□□□ 0.91
TMED3-204ENST00000543455 HELQQ8TDG4 1101 aa20.73■□□□□ 0.91
TMED3-204ENST00000543455 TCP11Q8WWU5 503 aa20.73■□□□□ 0.91
TMED3-204ENST00000543455 LPPQ93052 612 aa20.73■□□□□ 0.91
TMED3-204ENST00000543455 PCDHB6Q9Y5E3 794 aa20.73■□□□□ 0.91
TMED3-204ENST00000543455 TNFRSF10AO00220 468 aa20.72■□□□□ 0.91
TMED3-204ENST00000543455 HOXA2O43364 376 aa20.72■□□□□ 0.91
TMED3-204ENST00000543455 ARL2P36404 184 aa20.72■□□□□ 0.91
TMED3-204ENST00000543455 PBX3P40426 434 aa20.72■□□□□ 0.91
TMED3-204ENST00000543455 UBXN11Q5T124 520 aa20.72■□□□□ 0.91
TMED3-204ENST00000543455 SPOUT1Q5T280 376 aaKnown RBP20.72■□□□□ 0.91
TMED3-204ENST00000543455 TWF2Q6IBS0 349 aaKnown RBP20.72■□□□□ 0.91
TMED3-204ENST00000543455 IL27Q8NEV9 243 aa20.72■□□□□ 0.91
TMED3-204ENST00000543455 POLR3CQ9BUI4 534 aaPredicted RBP20.72■□□□□ 0.91
TMED3-204ENST00000543455 TUFT1Q9NNX1 390 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms